RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
TGFBR3-204ENST00000465892 ZSCAN23Q3MJ62 389 aa17.3■□□□□ 0.36
TGFBR3-204ENST00000465892 CHGAP10645 457 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-204ENST00000465892 MPNDQ8N594 471 aa17.3■□□□□ 0.36
TGFBR3-204ENST00000465892 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-204ENST00000465892 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
TGFBR3-204ENST00000465892 ATP10AO60312 1499 aa17.29■□□□□ 0.36
TGFBR3-204ENST00000465892 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 CEP152O94986 1710 aa17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 PRPF40AO75400 957 aaKnown RBP17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
TGFBR3-204ENST00000465892 RNF214Q8ND24 703 aa17.27■□□□□ 0.36
TGFBR3-204ENST00000465892 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
TGFBR3-204ENST00000465892 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.35
TGFBR3-204ENST00000465892 ZHX1Q9UKY1 873 aaPredicted RBP17.27■□□□□ 0.35
TGFBR3-204ENST00000465892 MAST1Q9Y2H9 1570 aa17.26■□□□□ 0.35
TGFBR3-204ENST00000465892 PTMSP20962 102 aa17.26■□□□□ 0.35
TGFBR3-204ENST00000465892 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
TGFBR3-204ENST00000465892 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
TGFBR3-204ENST00000465892 AFAP1Q8N556 730 aa17.25■□□□□ 0.35
TGFBR3-204ENST00000465892 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
TGFBR3-204ENST00000465892 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
TGFBR3-204ENST00000465892 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
TGFBR3-204ENST00000465892 LMBRD1Q9NUN5 540 aa17.24■□□□□ 0.35
TGFBR3-204ENST00000465892 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
TGFBR3-204ENST00000465892 TSC1Q92574 1164 aa17.24■□□□□ 0.35
TGFBR3-204ENST00000465892 SYCE3A1L190 88 aa17.23■□□□□ 0.35
TGFBR3-204ENST00000465892 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
TGFBR3-204ENST00000465892 PREX2Q70Z35 1606 aa17.23■□□□□ 0.35
TGFBR3-204ENST00000465892 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
TGFBR3-204ENST00000465892 ZNF445P59923 1031 aa17.22■□□□□ 0.35
TGFBR3-204ENST00000465892 GPT2Q8TD30 523 aa17.22■□□□□ 0.35
TGFBR3-204ENST00000465892 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
TGFBR3-204ENST00000465892 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
TGFBR3-204ENST00000465892 PTPRTO14522 1441 aa17.22■□□□□ 0.35
TGFBR3-204ENST00000465892 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
TGFBR3-204ENST00000465892 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.35
TGFBR3-204ENST00000465892 KANK1Q14678 1352 aa17.21■□□□□ 0.35
TGFBR3-204ENST00000465892 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 ZNF518AQ6AHZ1 1483 aa17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 ZNF500O60304 480 aaPredicted RBP17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 APBB1O00213 710 aa17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
TGFBR3-204ENST00000465892 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 TMEM63CQ9P1W3 806 aa17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
TGFBR3-204ENST00000465892 KIF3BO15066 747 aa17.18■□□□□ 0.34
TGFBR3-204ENST00000465892 PDLIM2Q96JY6 352 aa17.18■□□□□ 0.34
TGFBR3-204ENST00000465892 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
TGFBR3-204ENST00000465892 GSPT1P15170 499 aaKnown RBP17.18■□□□□ 0.34
TGFBR3-204ENST00000465892 SIRT2Q8IXJ6 389 aa17.18■□□□□ 0.34
TGFBR3-204ENST00000465892 PTMAP06454 111 aaKnown RBP17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 TERF1P54274 439 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 CDC45O75419 566 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 NUCB2P80303 420 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 CLEC17AQ6ZS10 378 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 ZNF830Q96NB3 372 aaPredicted RBP17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
TGFBR3-204ENST00000465892 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
TGFBR3-204ENST00000465892 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
TGFBR3-204ENST00000465892 STAC3Q96MF2 364 aa17.16■□□□□ 0.34
TGFBR3-204ENST00000465892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
TGFBR3-204ENST00000465892 HS1BP3Q53T59 392 aa17.15■□□□□ 0.34
TGFBR3-204ENST00000465892 ZDHHC9Q9Y397 364 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 NOS1P29475 1434 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 TRPM2O94759 1503 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 DYNC1I1O14576 645 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 GCC1Q96CN9 775 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 FBLN1P23142 703 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
TGFBR3-204ENST00000465892 RABEP1Q15276 862 aa17.13■□□□□ 0.33
TGFBR3-204ENST00000465892 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
TGFBR3-204ENST00000465892 SASS6Q6UVJ0 657 aa17.13■□□□□ 0.33
TGFBR3-204ENST00000465892 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
TGFBR3-204ENST00000465892 C17orf53Q8N3J3 647 aaPredicted RBP17.13■□□□□ 0.33
TGFBR3-204ENST00000465892 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
TGFBR3-204ENST00000465892 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
TGFBR3-204ENST00000465892 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
TGFBR3-204ENST00000465892 CBX1P83916 185 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms