RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 YY1P25490 414 aa19.98■□□□□ 0.79
HDAC6-215ENST00000465457 PSME1Q06323 249 aa19.98■□□□□ 0.79
HDAC6-215ENST00000465457 SAFB2Q14151 953 aaKnown RBP eCLIP19.98■□□□□ 0.79
HDAC6-215ENST00000465457 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
HDAC6-215ENST00000465457 SPATA31A5Q5VU36 1347 aa19.98■□□□□ 0.79
HDAC6-215ENST00000465457 SPATA31A7Q8IWB4 1347 aa19.98■□□□□ 0.79
HDAC6-215ENST00000465457 CAMKK2Q96RR4 588 aa19.96■□□□□ 0.79
HDAC6-215ENST00000465457 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.79
HDAC6-215ENST00000465457 TRIM37O94972 964 aa19.94■□□□□ 0.78
HDAC6-215ENST00000465457 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
HDAC6-215ENST00000465457 ANKARQ7Z5J8 1434 aa19.92■□□□□ 0.78
HDAC6-215ENST00000465457 PRAM1Q96QH2 718 aa19.91■□□□□ 0.78
HDAC6-215ENST00000465457 PRR36Q9H6K5 1346 aa19.89■□□□□ 0.77
HDAC6-215ENST00000465457 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
HDAC6-215ENST00000465457 SIRT1Q96EB6 747 aa19.88■□□□□ 0.77
HDAC6-215ENST00000465457 TIMELESSQ9UNS1 1208 aa19.88■□□□□ 0.77
HDAC6-215ENST00000465457 DLC1Q96QB1 1528 aa19.87■□□□□ 0.77
HDAC6-215ENST00000465457 SPATA31A1Q5TZJ5 1347 aa19.87■□□□□ 0.77
HDAC6-215ENST00000465457 APBA3O96018 575 aa19.86■□□□□ 0.77
HDAC6-215ENST00000465457 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
HDAC6-215ENST00000465457 C14orf93Q9H972 538 aaKnown RBP19.86■□□□□ 0.77
HDAC6-215ENST00000465457 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
HDAC6-215ENST00000465457 PARD3Q8TEW0 1356 aa19.85■□□□□ 0.77
HDAC6-215ENST00000465457 KIAA0232Q92628 1395 aa19.85■□□□□ 0.77
HDAC6-215ENST00000465457 CHRNA2Q15822 529 aa19.85■□□□□ 0.77
HDAC6-215ENST00000465457 PRDM11Q9NQV5 511 aa19.85■□□□□ 0.77
HDAC6-215ENST00000465457 ADGRB1O14514 1584 aa19.85■□□□□ 0.77
HDAC6-215ENST00000465457 UTRNP46939 3433 aa19.85■□□□□ 0.77
HDAC6-215ENST00000465457 FAM196AQ6ZSG2 479 aa19.83■□□□□ 0.77
HDAC6-215ENST00000465457 STRN4Q9NRL3 753 aa19.83■□□□□ 0.77
HDAC6-215ENST00000465457 CASZ1Q86V15 1759 aa19.83■□□□□ 0.76
HDAC6-215ENST00000465457 GPRASP1Q5JY77 1395 aa19.83■□□□□ 0.76
HDAC6-215ENST00000465457 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
HDAC6-215ENST00000465457 NRKQ7Z2Y5 1582 aa19.82■□□□□ 0.76
HDAC6-215ENST00000465457 ITSN1Q15811 1721 aa19.82■□□□□ 0.76
HDAC6-215ENST00000465457 MINK1Q8N4C8 1332 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-215ENST00000465457 SBF2Q86WG5 1849 aa19.8■□□□□ 0.76
HDAC6-215ENST00000465457 MYOM1P52179 1685 aa19.8■□□□□ 0.76
HDAC6-215ENST00000465457 LMO7Q8WWI1 1683 aa19.8■□□□□ 0.76
HDAC6-215ENST00000465457 SSH2Q76I76 1423 aa19.79■□□□□ 0.76
HDAC6-215ENST00000465457 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-215ENST00000465457 POGKQ9P215 609 aa19.79■□□□□ 0.76
HDAC6-215ENST00000465457 PEAK1Q9H792 1746 aa19.79■□□□□ 0.76
HDAC6-215ENST00000465457 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
HDAC6-215ENST00000465457 NINLQ9Y2I6 1382 aa19.78■□□□□ 0.76
HDAC6-215ENST00000465457 MPHOSPH9Q99550 1183 aa19.77■□□□□ 0.76
HDAC6-215ENST00000465457 PPP1R1BQ9UD71 204 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-215ENST00000465457 ATP7BP35670 1465 aa19.77■□□□□ 0.76
HDAC6-215ENST00000465457 RGPD3A6NKT7 1758 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-215ENST00000465457 RGPD4Q7Z3J3 1758 aa19.77■□□□□ 0.76
HDAC6-215ENST00000465457 ARHGEF28Q8N1W1 1705 aaKnown RBP19.76■□□□□ 0.75
HDAC6-215ENST00000465457 ZC3H6P61129 1189 aaKnown RBP19.76■□□□□ 0.75
HDAC6-215ENST00000465457 SPON1Q9HCB6 807 aa19.76■□□□□ 0.75
HDAC6-215ENST00000465457 TOPAZ1Q8N9V7 1692 aa19.75■□□□□ 0.75
HDAC6-215ENST00000465457 NUTM2GQ5VZR2 741 aa19.75■□□□□ 0.75
HDAC6-215ENST00000465457 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
HDAC6-215ENST00000465457 LRRC37A3O60309 1634 aa19.74■□□□□ 0.75
HDAC6-215ENST00000465457 KCNQ2O43526 872 aa19.74■□□□□ 0.75
HDAC6-215ENST00000465457 PDGFDQ9GZP0 370 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-215ENST00000465457 LARP1Q6PKG0 1096 aaKnown RBP19.73■□□□□ 0.75
HDAC6-215ENST00000465457 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
HDAC6-215ENST00000465457 ANO8Q9HCE9 1232 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-215ENST00000465457 NBPF8Q3BBV2 869 aa19.72■□□□□ 0.75
HDAC6-215ENST00000465457 NBPF14Q5TI25 921 aa19.72■□□□□ 0.75
HDAC6-215ENST00000465457 WASLO00401 505 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-215ENST00000465457 PDE3BQ13370 1112 aa19.71■□□□□ 0.75
HDAC6-215ENST00000465457 BARGINQ6ZT62 677 aa19.71■□□□□ 0.75
HDAC6-215ENST00000465457 WNK3Q9BYP7 1800 aa19.71■□□□□ 0.75
HDAC6-215ENST00000465457 EIF3AQ14152 1382 aaKnown RBP19.7■□□□□ 0.74
HDAC6-215ENST00000465457 CHD4Q14839 1912 aa19.7■□□□□ 0.74
HDAC6-215ENST00000465457 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-215ENST00000465457 ZNF784Q8NCA9 323 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-215ENST00000465457 PTF1AQ7RTS3 328 aa19.68■□□□□ 0.74
HDAC6-215ENST00000465457 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
HDAC6-215ENST00000465457 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-215ENST00000465457 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
HDAC6-215ENST00000465457 EVA1CP58658 441 aa19.65■□□□□ 0.74
HDAC6-215ENST00000465457 AKAP12Q02952 1782 aa19.65■□□□□ 0.74
HDAC6-215ENST00000465457 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
HDAC6-215ENST00000465457 OVOS2A0A0J9YW53 1432 aa19.64■□□□□ 0.73
HDAC6-215ENST00000465457 OVOS2Q6IE36 1432 aa19.64■□□□□ 0.73
HDAC6-215ENST00000465457 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
HDAC6-215ENST00000465457 ZBTB7AO95365 584 aa19.63■□□□□ 0.73
HDAC6-215ENST00000465457 NUDT16Q96DE0 195 aaKnown RBP19.63■□□□□ 0.73
HDAC6-215ENST00000465457 CPDO75976 1380 aa19.62■□□□□ 0.73
HDAC6-215ENST00000465457 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
HDAC6-215ENST00000465457 PTGER2P43116 358 aa19.62■□□□□ 0.73
HDAC6-215ENST00000465457 SIN3AQ96ST3 1273 aa19.62■□□□□ 0.73
HDAC6-215ENST00000465457 POLR3AO14802 1390 aaPredicted RBP19.61■□□□□ 0.73
HDAC6-215ENST00000465457 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
HDAC6-215ENST00000465457 USP19O94966 1318 aa19.6■□□□□ 0.73
HDAC6-215ENST00000465457 ACEP12821 1306 aa19.59■□□□□ 0.73
HDAC6-215ENST00000465457 COL18A1P39060 1754 aa19.58■□□□□ 0.73
HDAC6-215ENST00000465457 PROM2Q8N271 834 aa19.58■□□□□ 0.72
HDAC6-215ENST00000465457 ATF5Q9Y2D1 282 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-215ENST00000465457 CRB1P82279 1406 aa19.58■□□□□ 0.72
HDAC6-215ENST00000465457 RGPD5Q99666 1765 aa19.57■□□□□ 0.72
HDAC6-215ENST00000465457 PLSCR1O15162 318 aa19.56■□□□□ 0.72
HDAC6-215ENST00000465457 FHDC1Q9C0D6 1143 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-215ENST00000465457 KDM2AQ9Y2K7 1162 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms