RNA–Protein interactions for RNA: ENST00000464575.1

CCNL1-205, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-205ENST00000464575 DNMT3AQ9Y6K1 912 aaPredicted RBP7.58□□□□□ -1.2
CCNL1-205ENST00000464575 SCARF1Q14162 830 aa7.57□□□□□ -1.2
CCNL1-205ENST00000464575 MRPL14Q6P1L8 145 aaKnown RBP7.57□□□□□ -1.2
CCNL1-205ENST00000464575 EHBP1Q8NDI1 1231 aa7.57□□□□□ -1.2
CCNL1-205ENST00000464575 PHOX2BQ99453 314 aa7.57□□□□□ -1.2
CCNL1-205ENST00000464575 SULF1Q8IWU6 871 aa7.56□□□□□ -1.2
CCNL1-205ENST00000464575 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
CCNL1-205ENST00000464575 PPFIA3O75145 1194 aa7.54□□□□□ -1.2
CCNL1-205ENST00000464575 NISCHQ9Y2I1 1504 aa7.53□□□□□ -1.2
CCNL1-205ENST00000464575 MS4A1P11836 297 aa7.53□□□□□ -1.2
CCNL1-205ENST00000464575 FOXK2Q01167 660 aa7.53□□□□□ -1.2
CCNL1-205ENST00000464575 IRS1P35568 1242 aa7.52□□□□□ -1.21
CCNL1-205ENST00000464575 KRT76Q01546 638 aa7.52□□□□□ -1.21
CCNL1-205ENST00000464575 NLRP7Q8WX94 980 aa7.52□□□□□ -1.21
CCNL1-205ENST00000464575 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
CCNL1-205ENST00000464575 PTCRAQ6ISU1 281 aaPredicted RBP7.51□□□□□ -1.21
CCNL1-205ENST00000464575 GIGYF2Q6Y7W6 1299 aaKnown RBP7.51□□□□□ -1.21
CCNL1-205ENST00000464575 DDRGK1Q96HY6 314 aa7.51□□□□□ -1.21
CCNL1-205ENST00000464575 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
CCNL1-205ENST00000464575 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
CCNL1-205ENST00000464575 MAN1A2O60476 641 aa7.49□□□□□ -1.21
CCNL1-205ENST00000464575 SH3BP2P78314 561 aa7.49□□□□□ -1.21
CCNL1-205ENST00000464575 GPR161Q8N6U8 529 aaKnown RBP7.49□□□□□ -1.21
CCNL1-205ENST00000464575 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
CCNL1-205ENST00000464575 ADAM23O75077 832 aa7.48□□□□□ -1.21
CCNL1-205ENST00000464575 TIMP2P16035 220 aa7.48□□□□□ -1.21
CCNL1-205ENST00000464575 NNTQ13423 1086 aa7.48□□□□□ -1.21
CCNL1-205ENST00000464575 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
CCNL1-205ENST00000464575 ZNF385CQ66K41 422 aaPredicted RBP7.48□□□□□ -1.21
CCNL1-205ENST00000464575 KANK3Q6NY19 840 aa7.48□□□□□ -1.21
CCNL1-205ENST00000464575 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
CCNL1-205ENST00000464575 JUNDP17535 347 aa7.47□□□□□ -1.21
CCNL1-205ENST00000464575 MDM2Q00987 491 aaPredicted RBP7.47□□□□□ -1.21
CCNL1-205ENST00000464575 PSMG3-AS1Q96PY0 264 aa7.47□□□□□ -1.21
CCNL1-205ENST00000464575 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.22
CCNL1-205ENST00000464575 WDR4P57081 412 aaKnown RBP7.46□□□□□ -1.22
CCNL1-205ENST00000464575 CLCN1P35523 988 aa7.45□□□□□ -1.22
CCNL1-205ENST00000464575 MPNDQ8N594 471 aa7.45□□□□□ -1.22
CCNL1-205ENST00000464575 KLF16Q9BXK1 252 aaPredicted RBP7.45□□□□□ -1.22
CCNL1-205ENST00000464575 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
CCNL1-205ENST00000464575 TLL2Q9Y6L7 1015 aa7.45□□□□□ -1.22
CCNL1-205ENST00000464575 ARHGEF15O94989 841 aa7.44□□□□□ -1.22
CCNL1-205ENST00000464575 ADH1CP00326 375 aa7.44□□□□□ -1.22
CCNL1-205ENST00000464575 SVOPQ8N4V2 548 aa7.44□□□□□ -1.22
CCNL1-205ENST00000464575 NUDT12Q9BQG2 462 aa7.44□□□□□ -1.22
CCNL1-205ENST00000464575 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
CCNL1-205ENST00000464575 KDM4AO75164 1064 aa7.43□□□□□ -1.22
CCNL1-205ENST00000464575 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
CCNL1-205ENST00000464575 MARSP56192 900 aaKnown RBP7.43□□□□□ -1.22
CCNL1-205ENST00000464575 HLA-CQ95604 372 aa7.43□□□□□ -1.22
CCNL1-205ENST00000464575 COL25A1Q9BXS0 654 aaPredicted RBP7.43□□□□□ -1.22
CCNL1-205ENST00000464575 SH3D19Q5HYK7 790 aa7.42□□□□□ -1.22
CCNL1-205ENST00000464575 C6orf118Q5T5N4 469 aa7.42□□□□□ -1.22
CCNL1-205ENST00000464575 WHAMMQ8TF30 809 aa7.42□□□□□ -1.22
CCNL1-205ENST00000464575 SUPT5HO00267 1087 aaKnown RBP7.41□□□□□ -1.22
CCNL1-205ENST00000464575 CD46P15529 392 aa7.41□□□□□ -1.22
CCNL1-205ENST00000464575 SCARF2Q96GP6 870 aaPredicted RBP7.41□□□□□ -1.22
CCNL1-205ENST00000464575 MSTNO14793 375 aa7.4□□□□□ -1.22
CCNL1-205ENST00000464575 VARSP26640 1264 aaKnown RBP7.4□□□□□ -1.22
CCNL1-205ENST00000464575 ZMYND15Q9H091 742 aa7.4□□□□□ -1.22
CCNL1-205ENST00000464575 SLURP2P0DP57 97 aa7.39□□□□□ -1.23
CCNL1-205ENST00000464575 USP46P62068 366 aa7.39□□□□□ -1.23
CCNL1-205ENST00000464575 BEGAINQ9BUH8 593 aa7.39□□□□□ -1.23
CCNL1-205ENST00000464575 SKIV2LQ15477 1246 aaKnown RBP7.38□□□□□ -1.23
CCNL1-205ENST00000464575 RNFT1Q5M7Z0 435 aa7.38□□□□□ -1.23
CCNL1-205ENST00000464575 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
CCNL1-205ENST00000464575 BAP1Q92560 729 aa7.38□□□□□ -1.23
CCNL1-205ENST00000464575 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
CCNL1-205ENST00000464575 SOS2Q07890 1332 aaPredicted RBP7.37□□□□□ -1.23
CCNL1-205ENST00000464575 LINC01559Q495D7 138 aa7.37□□□□□ -1.23
CCNL1-205ENST00000464575 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
CCNL1-205ENST00000464575 PROCA1Q8NCQ7 364 aaPredicted RBP7.37□□□□□ -1.23
CCNL1-205ENST00000464575 ZFAND3Q9H8U3 227 aa7.37□□□□□ -1.23
CCNL1-205ENST00000464575 DNMT3LQ9UJW3 386 aa7.37□□□□□ -1.23
CCNL1-205ENST00000464575 ZIC2O95409 532 aaPredicted RBP7.36□□□□□ -1.23
CCNL1-205ENST00000464575 BMP2P12643 396 aa7.36□□□□□ -1.23
CCNL1-205ENST00000464575 PLA2G4EQ3MJ16 856 aa7.36□□□□□ -1.23
CCNL1-205ENST00000464575 FBXO31Q5XUX0 539 aaPredicted RBP7.36□□□□□ -1.23
CCNL1-205ENST00000464575 PCMTD1Q96MG8 357 aaPredicted RBP7.36□□□□□ -1.23
CCNL1-205ENST00000464575 ARXQ96QS3 562 aa7.36□□□□□ -1.23
CCNL1-205ENST00000464575 SPOCK3Q9BQ16 436 aa7.36□□□□□ -1.23
CCNL1-205ENST00000464575 UNC93B1Q9H1C4 597 aa7.36□□□□□ -1.23
CCNL1-205ENST00000464575 HOXA2O43364 376 aa7.35□□□□□ -1.23
CCNL1-205ENST00000464575 CCNYL3P0C7X3 344 aa7.35□□□□□ -1.23
CCNL1-205ENST00000464575 MYSM1Q5VVJ2 828 aa7.35□□□□□ -1.23
CCNL1-205ENST00000464575 ITPKCQ96DU7 683 aa7.35□□□□□ -1.23
CCNL1-205ENST00000464575 UPP2O95045 317 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 GUCA2AQ02747 115 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 RETREG3Q86VR2 466 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 Q8N3U1 123 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 ZNF511Q8NB15 262 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.34□□□□□ -1.23
CCNL1-205ENST00000464575 RSPH6AQ9H0K4 717 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
CCNL1-205ENST00000464575 ITGB2P05107 769 aa7.33□□□□□ -1.24
CCNL1-205ENST00000464575 LINC00528Q8N1L1 170 aa7.33□□□□□ -1.24
CCNL1-205ENST00000464575 PTSQ03393 145 aa7.32□□□□□ -1.24
CCNL1-205ENST00000464575 FLIIQ13045 1269 aa7.32□□□□□ -1.24
CCNL1-205ENST00000464575 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.32□□□□□ -1.242e-6■■■□□ 17.1
CCNL1-205ENST00000464575 CDK15Q96Q40 435 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms