RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 NUTM2DQ5VT03 806 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-204ENST00000463622 NUTM2AQ8IVF1 878 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-204ENST00000463622 CADPSQ9ULU8 1353 aa6.9□□□□□ -1.3
SCFD1-204ENST00000463622 WNT7AO00755 349 aa6.9□□□□□ -1.3
SCFD1-204ENST00000463622 PTPRNQ16849 979 aa6.9□□□□□ -1.3
SCFD1-204ENST00000463622 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
SCFD1-204ENST00000463622 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.3
SCFD1-204ENST00000463622 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-204ENST00000463622 CTHP32929 405 aa6.89□□□□□ -1.31
SCFD1-204ENST00000463622 RTL5Q5HYW3 569 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-204ENST00000463622 SMARCA4P51532 1647 aa6.89□□□□□ -1.31
SCFD1-204ENST00000463622 J3QL48 77 aa6.89□□□□□ -1.31
SCFD1-204ENST00000463622 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
SCFD1-204ENST00000463622 BAP1Q92560 729 aa6.89□□□□□ -1.31
SCFD1-204ENST00000463622 UNC93B1Q9H1C4 597 aa6.89□□□□□ -1.31
SCFD1-204ENST00000463622 LILRB3O75022 631 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 PRPF38BQ5VTL8 546 aaKnown RBP6.88□□□□□ -1.31
SCFD1-204ENST00000463622 LYPD8Q6UX82 237 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 ATP1B4Q9UN42 357 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-204ENST00000463622 POTECB2RU33 542 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 SH3BP2P78314 561 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 DESI1Q6ICB0 168 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-204ENST00000463622 DACH1Q9UI36 760 aa6.88□□□□□ -1.31
SCFD1-204ENST00000463622 PEG3Q9GZU2 1588 aa6.87□□□□□ -1.31
SCFD1-204ENST00000463622 PLEKHG3A1L390 1219 aa6.87□□□□□ -1.31
SCFD1-204ENST00000463622 SMPD1P17405 629 aa6.87□□□□□ -1.31
SCFD1-204ENST00000463622 FBXO31Q5XUX0 539 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-204ENST00000463622 ZNF787Q6DD87 383 aa6.87□□□□□ -1.31
SCFD1-204ENST00000463622 SNIP1Q8TAD8 396 aaKnown RBP6.87□□□□□ -1.31
SCFD1-204ENST00000463622 RSPH6AQ9H0K4 717 aa6.87□□□□□ -1.31
SCFD1-204ENST00000463622 WNT7BP56706 349 aa6.86□□□□□ -1.31
SCFD1-204ENST00000463622 AAASQ9NRG9 546 aa6.86□□□□□ -1.31
SCFD1-204ENST00000463622 MRC2Q9UBG0 1479 aa6.86□□□□□ -1.31
SCFD1-204ENST00000463622 BAZ1AQ9NRL2 1556 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-204ENST00000463622 EHBP1Q8NDI1 1231 aa6.86□□□□□ -1.31
SCFD1-204ENST00000463622 ALDH1A1P00352 501 aa6.84□□□□□ -1.31
SCFD1-204ENST00000463622 TPRNQ4KMQ1 711 aa6.84□□□□□ -1.31
SCFD1-204ENST00000463622 WDR62O43379 1518 aa6.84□□□□□ -1.31
SCFD1-204ENST00000463622 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.32
SCFD1-204ENST00000463622 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.32
SCFD1-204ENST00000463622 NEUROD2Q15784 382 aa6.84□□□□□ -1.32
SCFD1-204ENST00000463622 TUSC1Q2TAM9 212 aa6.84□□□□□ -1.32
SCFD1-204ENST00000463622 HPS1Q92902 700 aa6.84□□□□□ -1.32
SCFD1-204ENST00000463622 SIAH2O43255 324 aa6.83□□□□□ -1.32
SCFD1-204ENST00000463622 CTDSPL2Q05D32 466 aa6.83□□□□□ -1.32
SCFD1-204ENST00000463622 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
SCFD1-204ENST00000463622 DDRGK1Q96HY6 314 aa6.83□□□□□ -1.32
SCFD1-204ENST00000463622 AXIN1O15169 862 aa6.82□□□□□ -1.32
SCFD1-204ENST00000463622 AVPP01185 164 aa6.82□□□□□ -1.32
SCFD1-204ENST00000463622 SH3D19Q5HYK7 790 aa6.82□□□□□ -1.32
SCFD1-204ENST00000463622 IL27Q8NEV9 243 aa6.82□□□□□ -1.32
SCFD1-204ENST00000463622 FOXJ1Q92949 421 aa6.82□□□□□ -1.32
SCFD1-204ENST00000463622 TLL2Q9Y6L7 1015 aa6.82□□□□□ -1.32
SCFD1-204ENST00000463622 MROH2BQ7Z745 1585 aa6.81□□□□□ -1.32
SCFD1-204ENST00000463622 HELBQ8NG08 1087 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-204ENST00000463622 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
SCFD1-204ENST00000463622 LRRN4Q8WUT4 740 aa6.8□□□□□ -1.32
SCFD1-204ENST00000463622 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCFD1-204ENST00000463622 AGERQ15109 404 aa6.79□□□□□ -1.32
SCFD1-204ENST00000463622 GMPR2Q9P2T1 348 aaKnown RBP6.79□□□□□ -1.32
SCFD1-204ENST00000463622 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-204ENST00000463622 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
SCFD1-204ENST00000463622 CRIPAKQ8N1N5 446 aa6.78□□□□□ -1.32
SCFD1-204ENST00000463622 WASF2Q9Y6W5 498 aa6.78□□□□□ -1.32
SCFD1-204ENST00000463622 AP1G2O75843 785 aa6.77□□□□□ -1.33
SCFD1-204ENST00000463622 VARSP26640 1264 aaKnown RBP6.77□□□□□ -1.33
SCFD1-204ENST00000463622 ARID5BQ14865 1188 aa6.77□□□□□ -1.33
SCFD1-204ENST00000463622 CTC1Q2NKJ3 1217 aa6.77□□□□□ -1.33
SCFD1-204ENST00000463622 ZNF775Q96BV0 537 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-204ENST00000463622 FANCD2Q9BXW9 1451 aa6.77□□□□□ -1.33
SCFD1-204ENST00000463622 CEP164Q9UPV0 1460 aa6.77□□□□□ -1.33
SCFD1-204ENST00000463622 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-204ENST00000463622 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
SCFD1-204ENST00000463622 CFTRP13569 1480 aa6.76□□□□□ -1.33
SCFD1-204ENST00000463622 PRKCSHP14314 528 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-204ENST00000463622 NR6A1Q15406 480 aa6.75□□□□□ -1.33
SCFD1-204ENST00000463622 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
SCFD1-204ENST00000463622 EPS8L1Q8TE68 723 aa6.75□□□□□ -1.33
SCFD1-204ENST00000463622 ATP13A2Q9NQ11 1180 aa6.75□□□□□ -1.33
SCFD1-204ENST00000463622 MAGEB6P1A0A0J9YX57 407 aa6.74□□□□□ -1.33
SCFD1-204ENST00000463622 C11orf95C9JLR9 678 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-204ENST00000463622 BMP1P13497 986 aa6.74□□□□□ -1.33
SCFD1-204ENST00000463622 FAM174AQ8TBP5 190 aa6.74□□□□□ -1.33
SCFD1-204ENST00000463622 CARD14Q9BXL6 1004 aa6.74□□□□□ -1.33
SCFD1-204ENST00000463622 RFC5P40937 340 aa6.73□□□□□ -1.33
SCFD1-204ENST00000463622 NNTQ13423 1086 aa6.73□□□□□ -1.33
SCFD1-204ENST00000463622 BPHLQ86WA6 291 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-204ENST00000463622 HMX1Q9NP08 348 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-204ENST00000463622 URB2Q14146 1524 aaKnown RBP6.73□□□□□ -1.33
SCFD1-204ENST00000463622 CAPN5O15484 640 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-204ENST00000463622 ARMC2Q8NEN0 867 aa6.72□□□□□ -1.33
SCFD1-204ENST00000463622 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-204ENST00000463622 ARHGEF11O15085 1522 aa6.72□□□□□ -1.33
SCFD1-204ENST00000463622 RIMBP3CA6NJZ7 1639 aa6.72□□□□□ -1.33
SCFD1-204ENST00000463622 RIMBP3BA6NNM3 1639 aa6.72□□□□□ -1.33
SCFD1-204ENST00000463622 RIMBP3Q9UFD9 1639 aa6.72□□□□□ -1.33
SCFD1-204ENST00000463622 SNRPBP14678 240 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms