RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 POTEAQ6S8J7 498 aa16.97■□□□□ 0.31
HPS1-206ENST00000462743 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
HPS1-206ENST00000462743 TMF1P82094 1093 aa16.96■□□□□ 0.31
HPS1-206ENST00000462743 NGLY1Q96IV0 654 aa16.96■□□□□ 0.31
HPS1-206ENST00000462743 USP6P35125 1406 aa16.96■□□□□ 0.3
HPS1-206ENST00000462743 CABLES1Q8TDN4 633 aa16.95■□□□□ 0.3
HPS1-206ENST00000462743 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
HPS1-206ENST00000462743 MARF1Q9Y4F3 1742 aaKnown RBP16.95■□□□□ 0.3
HPS1-206ENST00000462743 AFF2P51816 1311 aa16.95■□□□□ 0.3
HPS1-206ENST00000462743 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
HPS1-206ENST00000462743 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
HPS1-206ENST00000462743 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
HPS1-206ENST00000462743 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
HPS1-206ENST00000462743 AKAP12Q02952 1782 aa16.93■□□□□ 0.3
HPS1-206ENST00000462743 ABTB2Q8N961 1025 aa16.93■□□□□ 0.3
HPS1-206ENST00000462743 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
HPS1-206ENST00000462743 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
HPS1-206ENST00000462743 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
HPS1-206ENST00000462743 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
HPS1-206ENST00000462743 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
HPS1-206ENST00000462743 CD163L1Q9NR16 1453 aa16.91■□□□□ 0.3
HPS1-206ENST00000462743 USP19O94966 1318 aa16.91■□□□□ 0.3
HPS1-206ENST00000462743 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
HPS1-206ENST00000462743 HDGFL2Q7Z4V5 671 aaPredicted RBP16.9■□□□□ 0.3
HPS1-206ENST00000462743 USP21Q9UK80 565 aa16.9■□□□□ 0.3
HPS1-206ENST00000462743 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
HPS1-206ENST00000462743 CRYBG1Q9Y4K1 1723 aa16.9■□□□□ 0.3
HPS1-206ENST00000462743 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.3
HPS1-206ENST00000462743 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
HPS1-206ENST00000462743 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
HPS1-206ENST00000462743 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.29
HPS1-206ENST00000462743 SLIT2O94813 1529 aa16.89■□□□□ 0.29
HPS1-206ENST00000462743 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
HPS1-206ENST00000462743 NLRP6P59044 892 aa16.88■□□□□ 0.29
HPS1-206ENST00000462743 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
HPS1-206ENST00000462743 UNC5CLQ8IV45 518 aa16.87■□□□□ 0.29
HPS1-206ENST00000462743 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
HPS1-206ENST00000462743 GCP02774 474 aa16.86■□□□□ 0.29
HPS1-206ENST00000462743 RXRBP28702 533 aa16.86■□□□□ 0.29
HPS1-206ENST00000462743 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
HPS1-206ENST00000462743 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
HPS1-206ENST00000462743 USP31Q70CQ4 1352 aa16.86■□□□□ 0.29
HPS1-206ENST00000462743 ATRNO75882 1429 aa16.85■□□□□ 0.29
HPS1-206ENST00000462743 A0A1W2PP64 1363 aa16.84■□□□□ 0.29
HPS1-206ENST00000462743 CPDO75976 1380 aa16.84■□□□□ 0.29
HPS1-206ENST00000462743 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
HPS1-206ENST00000462743 EDC4Q6P2E9 1401 aaKnown RBP16.84■□□□□ 0.29
HPS1-206ENST00000462743 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
HPS1-206ENST00000462743 PLEKHG5O94827 1062 aa16.83■□□□□ 0.28
HPS1-206ENST00000462743 NRKQ7Z2Y5 1582 aa16.83■□□□□ 0.28
HPS1-206ENST00000462743 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.83■□□□□ 0.28
HPS1-206ENST00000462743 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
HPS1-206ENST00000462743 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
HPS1-206ENST00000462743 PHRF1Q9P1Y6 1649 aaKnown RBP16.82■□□□□ 0.28
HPS1-206ENST00000462743 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
HPS1-206ENST00000462743 SOCS7O14512 581 aa16.82■□□□□ 0.28
HPS1-206ENST00000462743 VPS72Q15906 364 aa16.82■□□□□ 0.28
HPS1-206ENST00000462743 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
HPS1-206ENST00000462743 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
HPS1-206ENST00000462743 SLIT3O75094 1523 aa16.81■□□□□ 0.28
HPS1-206ENST00000462743 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
HPS1-206ENST00000462743 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
HPS1-206ENST00000462743 GJD4Q96KN9 370 aaPredicted RBP16.81■□□□□ 0.28
HPS1-206ENST00000462743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.8■□□□□ 0.28
HPS1-206ENST00000462743 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
HPS1-206ENST00000462743 USP54Q70EL1 1684 aa16.79■□□□□ 0.28
HPS1-206ENST00000462743 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
HPS1-206ENST00000462743 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
HPS1-206ENST00000462743 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
HPS1-206ENST00000462743 NME9Q86XW9 330 aa16.78■□□□□ 0.28
HPS1-206ENST00000462743 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
HPS1-206ENST00000462743 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
HPS1-206ENST00000462743 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.28
HPS1-206ENST00000462743 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.27
HPS1-206ENST00000462743 FYB1O15117 783 aa16.76■□□□□ 0.27
HPS1-206ENST00000462743 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
HPS1-206ENST00000462743 NRAPQ86VF7 1730 aa16.75■□□□□ 0.27
HPS1-206ENST00000462743 MYOM1P52179 1685 aa16.75■□□□□ 0.27
HPS1-206ENST00000462743 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
HPS1-206ENST00000462743 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
HPS1-206ENST00000462743 CAMTA1Q9Y6Y1 1673 aa16.74■□□□□ 0.27
HPS1-206ENST00000462743 COL18A1P39060 1754 aa16.74■□□□□ 0.27
HPS1-206ENST00000462743 LMO7Q8WWI1 1683 aa16.73■□□□□ 0.27
HPS1-206ENST00000462743 GLI3P10071 1580 aa16.72■□□□□ 0.27
HPS1-206ENST00000462743 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
HPS1-206ENST00000462743 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
HPS1-206ENST00000462743 NFAT5O94916 1531 aa16.72■□□□□ 0.27
HPS1-206ENST00000462743 COG3Q96JB2 828 aa16.72■□□□□ 0.27
HPS1-206ENST00000462743 EVA1CP58658 441 aa16.71■□□□□ 0.27
HPS1-206ENST00000462743 RGS12O14924 1447 aa16.7■□□□□ 0.26
HPS1-206ENST00000462743 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
HPS1-206ENST00000462743 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
HPS1-206ENST00000462743 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
HPS1-206ENST00000462743 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
HPS1-206ENST00000462743 PANK3Q9H999 370 aa16.69■□□□□ 0.26
HPS1-206ENST00000462743 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
HPS1-206ENST00000462743 ABCC6O95255 1503 aa16.69■□□□□ 0.26
HPS1-206ENST00000462743 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
HPS1-206ENST00000462743 STRN4Q9NRL3 753 aa16.68■□□□□ 0.26
HPS1-206ENST00000462743 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms