RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
PKP4-208ENST00000462335 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
PKP4-208ENST00000462335 CABLES1Q8TDN4 633 aa13.29□□□□□ -0.28
PKP4-208ENST00000462335 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
PKP4-208ENST00000462335 NLRP6P59044 892 aa13.28□□□□□ -0.28
PKP4-208ENST00000462335 TESK2Q96S53 571 aa13.28□□□□□ -0.28
PKP4-208ENST00000462335 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
PKP4-208ENST00000462335 ZBTB7CA1YPR0 619 aa13.27□□□□□ -0.29
PKP4-208ENST00000462335 SLC12A5Q9H2X9 1139 aa13.27□□□□□ -0.29
PKP4-208ENST00000462335 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.29
PKP4-208ENST00000462335 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
PKP4-208ENST00000462335 AFF2P51816 1311 aa13.26□□□□□ -0.29
PKP4-208ENST00000462335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.298e-7■■■□□ 15.8
PKP4-208ENST00000462335 USP21Q9UK80 565 aa13.26□□□□□ -0.29
PKP4-208ENST00000462335 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
PKP4-208ENST00000462335 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
PKP4-208ENST00000462335 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
PKP4-208ENST00000462335 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
PKP4-208ENST00000462335 TTC21AQ8NDW8 1320 aa13.23□□□□□ -0.29
PKP4-208ENST00000462335 RXRBP28702 533 aa13.23□□□□□ -0.29
PKP4-208ENST00000462335 EVA1CP58658 441 aa13.23□□□□□ -0.29
PKP4-208ENST00000462335 ZC3H6P61129 1189 aaKnown RBP13.23□□□□□ -0.29
PKP4-208ENST00000462335 USP6P35125 1406 aa13.22□□□□□ -0.29
PKP4-208ENST00000462335 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
PKP4-208ENST00000462335 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
PKP4-208ENST00000462335 SOX12O15370 315 aa13.22□□□□□ -0.29
PKP4-208ENST00000462335 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
PKP4-208ENST00000462335 TRPC5Q9UL62 973 aaPredicted RBP13.22□□□□□ -0.29
PKP4-208ENST00000462335 LRP6O75581 1613 aa13.21□□□□□ -0.29
PKP4-208ENST00000462335 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
PKP4-208ENST00000462335 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
PKP4-208ENST00000462335 GCP02774 474 aa13.19□□□□□ -0.3
PKP4-208ENST00000462335 COG3Q96JB2 828 aa13.19□□□□□ -0.3
PKP4-208ENST00000462335 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
PKP4-208ENST00000462335 A0A0G2JS52 829 aa13.18□□□□□ -0.3
PKP4-208ENST00000462335 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
PKP4-208ENST00000462335 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
PKP4-208ENST00000462335 MYT1Q01538 1121 aa13.18□□□□□ -0.3
PKP4-208ENST00000462335 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
PKP4-208ENST00000462335 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
PKP4-208ENST00000462335 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
PKP4-208ENST00000462335 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
PKP4-208ENST00000462335 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
PKP4-208ENST00000462335 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
PKP4-208ENST00000462335 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
PKP4-208ENST00000462335 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
PKP4-208ENST00000462335 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
PKP4-208ENST00000462335 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
PKP4-208ENST00000462335 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
PKP4-208ENST00000462335 NME9Q86XW9 330 aa13.16□□□□□ -0.3
PKP4-208ENST00000462335 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
PKP4-208ENST00000462335 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
PKP4-208ENST00000462335 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
PKP4-208ENST00000462335 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
PKP4-208ENST00000462335 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
PKP4-208ENST00000462335 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
PKP4-208ENST00000462335 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
PKP4-208ENST00000462335 PANK3Q9H999 370 aa13.13□□□□□ -0.31
PKP4-208ENST00000462335 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
PKP4-208ENST00000462335 KNSTRNQ9Y448 316 aa13.13□□□□□ -0.31
PKP4-208ENST00000462335 USP19O94966 1318 aa13.13□□□□□ -0.31
PKP4-208ENST00000462335 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
PKP4-208ENST00000462335 VPS72Q15906 364 aa13.12□□□□□ -0.31
PKP4-208ENST00000462335 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
PKP4-208ENST00000462335 AMPHP49418 695 aa13.11□□□□□ -0.31
PKP4-208ENST00000462335 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
PKP4-208ENST00000462335 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
PKP4-208ENST00000462335 MON2Q7Z3U7 1717 aa13.1□□□□□ -0.31
PKP4-208ENST00000462335 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
PKP4-208ENST00000462335 CD163L1Q9NR16 1453 aa13.1□□□□□ -0.31
PKP4-208ENST00000462335 FYB1O15117 783 aa13.09□□□□□ -0.31
PKP4-208ENST00000462335 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
PKP4-208ENST00000462335 NSD3Q9BZ95 1437 aa13.09□□□□□ -0.31
PKP4-208ENST00000462335 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
PKP4-208ENST00000462335 CPDO75976 1380 aa13.08□□□□□ -0.31
PKP4-208ENST00000462335 USP31Q70CQ4 1352 aa13.08□□□□□ -0.31
PKP4-208ENST00000462335 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
PKP4-208ENST00000462335 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
PKP4-208ENST00000462335 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.32
PKP4-208ENST00000462335 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
PKP4-208ENST00000462335 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
PKP4-208ENST00000462335 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
PKP4-208ENST00000462335 BCL9LQ86UU0 1499 aa13.08□□□□□ -0.32
PKP4-208ENST00000462335 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
PKP4-208ENST00000462335 SLIT2O94813 1529 aa13.08□□□□□ -0.32
PKP4-208ENST00000462335 CNGB1Q14028 1251 aaPredicted RBP13.07□□□□□ -0.32
PKP4-208ENST00000462335 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
PKP4-208ENST00000462335 NWD2Q9ULI1 1742 aa13.07□□□□□ -0.32
PKP4-208ENST00000462335 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
PKP4-208ENST00000462335 ATRNO75882 1429 aa13.06□□□□□ -0.32
PKP4-208ENST00000462335 SOCS7O14512 581 aa13.06□□□□□ -0.32
PKP4-208ENST00000462335 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
PKP4-208ENST00000462335 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
PKP4-208ENST00000462335 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
PKP4-208ENST00000462335 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
PKP4-208ENST00000462335 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
PKP4-208ENST00000462335 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
PKP4-208ENST00000462335 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
PKP4-208ENST00000462335 SLIT3O75094 1523 aa13.04□□□□□ -0.32
PKP4-208ENST00000462335 NRKQ7Z2Y5 1582 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms