RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NGLY1Q96IV0 654 aa22.31■■□□□ 1.16
ERCC3-206ENST00000462306 ABCA3Q99758 1704 aa22.31■■□□□ 1.16
ERCC3-206ENST00000462306 USP6P35125 1406 aa22.31■■□□□ 1.16
ERCC3-206ENST00000462306 BRD4O60885 1362 aaPredicted RBP22.3■■□□□ 1.16
ERCC3-206ENST00000462306 PLEKHG5O94827 1062 aa22.3■■□□□ 1.16
ERCC3-206ENST00000462306 MARF1Q9Y4F3 1742 aaKnown RBP22.3■■□□□ 1.16
ERCC3-206ENST00000462306 CPSF1Q10570 1443 aaKnown RBP22.29■■□□□ 1.16
ERCC3-206ENST00000462306 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
ERCC3-206ENST00000462306 FNBP4Q8N3X1 1017 aaPredicted RBP22.28■■□□□ 1.16
ERCC3-206ENST00000462306 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
ERCC3-206ENST00000462306 ZNF692Q9BU19 519 aaPredicted RBP22.27■■□□□ 1.16
ERCC3-206ENST00000462306 CRYBG1Q9Y4K1 1723 aa22.27■■□□□ 1.16
ERCC3-206ENST00000462306 AKAP12Q02952 1782 aa22.26■■□□□ 1.15
ERCC3-206ENST00000462306 TMF1P82094 1093 aa22.25■■□□□ 1.15
ERCC3-206ENST00000462306 NUTM2GQ5VZR2 741 aa22.25■■□□□ 1.15
ERCC3-206ENST00000462306 ABTB2Q8N961 1025 aa22.25■■□□□ 1.15
ERCC3-206ENST00000462306 SLC12A5Q9H2X9 1139 aa22.25■■□□□ 1.15
ERCC3-206ENST00000462306 CD163L1Q9NR16 1453 aa22.25■■□□□ 1.15
ERCC3-206ENST00000462306 TMC1Q8TDI8 760 aa22.24■■□□□ 1.15
ERCC3-206ENST00000462306 USP21Q9UK80 565 aa22.23■■□□□ 1.15
ERCC3-206ENST00000462306 BCL9LQ86UU0 1499 aa22.22■■□□□ 1.15
ERCC3-206ENST00000462306 SLIT2O94813 1529 aa22.22■■□□□ 1.15
ERCC3-206ENST00000462306 KTN1Q86UP2 1357 aaKnown RBP22.22■■□□□ 1.15
ERCC3-206ENST00000462306 EIF4G2P78344 907 aaKnown RBP eCLIP22.21■■□□□ 1.15
ERCC3-206ENST00000462306 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
ERCC3-206ENST00000462306 USP19O94966 1318 aa22.21■■□□□ 1.15
ERCC3-206ENST00000462306 TTC21BQ7Z4L5 1316 aa22.21■■□□□ 1.15
ERCC3-206ENST00000462306 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
ERCC3-206ENST00000462306 FAM83GA6ND36 823 aa22.2■■□□□ 1.14
ERCC3-206ENST00000462306 NLRP13Q86W25 1043 aa22.2■■□□□ 1.14
ERCC3-206ENST00000462306 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
ERCC3-206ENST00000462306 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.14
ERCC3-206ENST00000462306 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
ERCC3-206ENST00000462306 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
ERCC3-206ENST00000462306 PIK3C2AO00443 1686 aa22.18■■□□□ 1.14
ERCC3-206ENST00000462306 A0A1W2PP64 1363 aa22.18■■□□□ 1.14
ERCC3-206ENST00000462306 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
ERCC3-206ENST00000462306 ATRNO75882 1429 aa22.17■■□□□ 1.14
ERCC3-206ENST00000462306 RXRBP28702 533 aa22.17■■□□□ 1.14
ERCC3-206ENST00000462306 NLRP6P59044 892 aa22.17■■□□□ 1.14
ERCC3-206ENST00000462306 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
ERCC3-206ENST00000462306 HDGFL2Q7Z4V5 671 aaPredicted RBP22.17■■□□□ 1.14
ERCC3-206ENST00000462306 TERF2IPQ9NYB0 399 aa22.17■■□□□ 1.14
ERCC3-206ENST00000462306 TRPC5Q9UL62 973 aaPredicted RBP22.17■■□□□ 1.14
ERCC3-206ENST00000462306 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
ERCC3-206ENST00000462306 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.15■■□□□ 1.14
ERCC3-206ENST00000462306 PLCH1Q4KWH8 1693 aa22.15■■□□□ 1.14
ERCC3-206ENST00000462306 RBM6P78332 1123 aaKnown RBP22.15■■□□□ 1.14
ERCC3-206ENST00000462306 KIAA0232Q92628 1395 aa22.14■■□□□ 1.14
ERCC3-206ENST00000462306 SOCS7O14512 581 aa22.14■■□□□ 1.13
ERCC3-206ENST00000462306 GCP02774 474 aa22.14■■□□□ 1.13
ERCC3-206ENST00000462306 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.13
ERCC3-206ENST00000462306 COL14A1Q05707 1796 aaKnown RBP22.14■■□□□ 1.13
ERCC3-206ENST00000462306 NWD2Q9ULI1 1742 aa22.14■■□□□ 1.13
ERCC3-206ENST00000462306 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.13
ERCC3-206ENST00000462306 SLIT3O75094 1523 aa22.13■■□□□ 1.13
ERCC3-206ENST00000462306 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
ERCC3-206ENST00000462306 PRDM11Q9NQV5 511 aa22.13■■□□□ 1.13
ERCC3-206ENST00000462306 CPDO75976 1380 aa22.12■■□□□ 1.13
ERCC3-206ENST00000462306 ANKRD36BQ8N2N9 1353 aa22.12■■□□□ 1.13
ERCC3-206ENST00000462306 CDK12Q9NYV4 1490 aaPredicted RBP22.11■■□□□ 1.13
ERCC3-206ENST00000462306 BTG4Q9NY30 223 aa22.11■■□□□ 1.13
ERCC3-206ENST00000462306 CHRNA2Q15822 529 aa22.1■■□□□ 1.13
ERCC3-206ENST00000462306 NME9Q86XW9 330 aa22.1■■□□□ 1.13
ERCC3-206ENST00000462306 ZRANB1Q9UGI0 708 aa22.1■■□□□ 1.13
ERCC3-206ENST00000462306 USP31Q70CQ4 1352 aa22.1■■□□□ 1.13
ERCC3-206ENST00000462306 GJD4Q96KN9 370 aaPredicted RBP22.09■■□□□ 1.13
ERCC3-206ENST00000462306 MYOM1P52179 1685 aa22.09■■□□□ 1.13
ERCC3-206ENST00000462306 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
ERCC3-206ENST00000462306 VPS72Q15906 364 aa22.08■■□□□ 1.13
ERCC3-206ENST00000462306 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
ERCC3-206ENST00000462306 RGS12O14924 1447 aa22.06■■□□□ 1.12
ERCC3-206ENST00000462306 GLI3P10071 1580 aa22.05■■□□□ 1.12
ERCC3-206ENST00000462306 KCNH5Q8NCM2 988 aa22.05■■□□□ 1.12
ERCC3-206ENST00000462306 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
ERCC3-206ENST00000462306 C11orf95C9JLR9 678 aaPredicted RBP22.04■■□□□ 1.12
ERCC3-206ENST00000462306 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
ERCC3-206ENST00000462306 NFAT5O94916 1531 aa22.03■■□□□ 1.12
ERCC3-206ENST00000462306 OVOS2A0A0J9YW53 1432 aa22.03■■□□□ 1.12
ERCC3-206ENST00000462306 OVOS2Q6IE36 1432 aa22.03■■□□□ 1.12
ERCC3-206ENST00000462306 ARHGEF25Q86VW2 580 aa22.02■■□□□ 1.12
ERCC3-206ENST00000462306 CARD14Q9BXL6 1004 aa22.02■■□□□ 1.12
ERCC3-206ENST00000462306 SOX12O15370 315 aa22.01■■□□□ 1.11
ERCC3-206ENST00000462306 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
ERCC3-206ENST00000462306 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
ERCC3-206ENST00000462306 CCDC9Q9Y3X0 531 aaKnown RBP22■■□□□ 1.11
ERCC3-206ENST00000462306 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
ERCC3-206ENST00000462306 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
ERCC3-206ENST00000462306 COL18A1P39060 1754 aa21.99■■□□□ 1.11
ERCC3-206ENST00000462306 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
ERCC3-206ENST00000462306 FYB1O15117 783 aa21.98■■□□□ 1.11
ERCC3-206ENST00000462306 ONECUT3O60422 494 aaPredicted RBP21.98■■□□□ 1.11
ERCC3-206ENST00000462306 STRN4Q9NRL3 753 aa21.98■■□□□ 1.11
ERCC3-206ENST00000462306 COL5A2P05997 1499 aaPredicted RBP21.96■■□□□ 1.11
ERCC3-206ENST00000462306 COG3Q96JB2 828 aa21.96■■□□□ 1.11
ERCC3-206ENST00000462306 AXIN2Q9Y2T1 843 aa21.96■■□□□ 1.11
ERCC3-206ENST00000462306 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
ERCC3-206ENST00000462306 EVA1CP58658 441 aa21.95■■□□□ 1.1
ERCC3-206ENST00000462306 SPATA31A1Q5TZJ5 1347 aa21.95■■□□□ 1.1
ERCC3-206ENST00000462306 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms