RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 RIC3Q7Z5B4 369 aa10.54□□□□□ -0.72
THUMPD3-207ENST00000461636 KIFC2Q96AC6 838 aa10.54□□□□□ -0.72
THUMPD3-207ENST00000461636 CTHP32929 405 aa10.53□□□□□ -0.72
THUMPD3-207ENST00000461636 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
THUMPD3-207ENST00000461636 ZNF511Q8NB15 262 aa10.53□□□□□ -0.72
THUMPD3-207ENST00000461636 BAP1Q92560 729 aa10.53□□□□□ -0.72
THUMPD3-207ENST00000461636 TRIM47Q96LD4 638 aa10.53□□□□□ -0.72
THUMPD3-207ENST00000461636 PCDHB15Q9Y5E8 787 aa10.53□□□□□ -0.72
THUMPD3-207ENST00000461636 HRCP23327 699 aa10.52□□□□□ -0.73
THUMPD3-207ENST00000461636 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
THUMPD3-207ENST00000461636 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
THUMPD3-207ENST00000461636 CFAP99D6REC4 459 aa10.51□□□□□ -0.73
THUMPD3-207ENST00000461636 VARSP26640 1264 aaKnown RBP10.51□□□□□ -0.73
THUMPD3-207ENST00000461636 CSPP1Q1MSJ5 1256 aa10.5□□□□□ -0.73
THUMPD3-207ENST00000461636 WFS1O76024 890 aa10.49□□□□□ -0.73
THUMPD3-207ENST00000461636 SLC24A3Q9HC58 644 aa10.49□□□□□ -0.73
THUMPD3-207ENST00000461636 TLL2Q9Y6L7 1015 aa10.49□□□□□ -0.73
THUMPD3-207ENST00000461636 CAPN5O15484 640 aaPredicted RBP10.48□□□□□ -0.73
THUMPD3-207ENST00000461636 SNRPBP14678 240 aaKnown RBP10.48□□□□□ -0.73
THUMPD3-207ENST00000461636 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
THUMPD3-207ENST00000461636 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
THUMPD3-207ENST00000461636 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 NUTM2DQ5VT03 806 aaPredicted RBP10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 MPNDQ8N594 471 aa10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 TSC1Q92574 1164 aa10.47□□□□□ -0.73
THUMPD3-207ENST00000461636 F12P00748 615 aaPredicted RBP10.46□□□□□ -0.73
THUMPD3-207ENST00000461636 LCE2AQ5TA79 106 aaPredicted RBP10.46□□□□□ -0.73
THUMPD3-207ENST00000461636 FAM174AQ8TBP5 190 aa10.46□□□□□ -0.73
THUMPD3-207ENST00000461636 MAP10Q9P2G4 905 aa10.46□□□□□ -0.73
THUMPD3-207ENST00000461636 HELBQ8NG08 1087 aaPredicted RBP10.45□□□□□ -0.74
THUMPD3-207ENST00000461636 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
THUMPD3-207ENST00000461636 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
THUMPD3-207ENST00000461636 BMP1P13497 986 aa10.43□□□□□ -0.74
THUMPD3-207ENST00000461636 NFX1Q12986 1120 aaKnown RBP10.43□□□□□ -0.74
THUMPD3-207ENST00000461636 NNTQ13423 1086 aa10.43□□□□□ -0.74
THUMPD3-207ENST00000461636 QPCTQ16769 361 aa10.43□□□□□ -0.74
THUMPD3-207ENST00000461636 BCANQ96GW7 911 aa10.43□□□□□ -0.74
THUMPD3-207ENST00000461636 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
THUMPD3-207ENST00000461636 AGERQ15109 404 aa10.42□□□□□ -0.74
THUMPD3-207ENST00000461636 LILRB3O75022 631 aa10.41□□□□□ -0.74
THUMPD3-207ENST00000461636 ADH1CP00326 375 aa10.41□□□□□ -0.74
THUMPD3-207ENST00000461636 BPHLQ86WA6 291 aaPredicted RBP10.41□□□□□ -0.74
THUMPD3-207ENST00000461636 ARMC2Q8NEN0 867 aa10.41□□□□□ -0.74
THUMPD3-207ENST00000461636 PER1O15534 1290 aaPredicted RBP10.4□□□□□ -0.74
THUMPD3-207ENST00000461636 TRIM46Q7Z4K8 759 aa10.4□□□□□ -0.74
THUMPD3-207ENST00000461636 FOXJ1Q92949 421 aa10.4□□□□□ -0.74
THUMPD3-207ENST00000461636 TERTO14746 1132 aaKnown RBP10.39□□□□□ -0.75
THUMPD3-207ENST00000461636 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
THUMPD3-207ENST00000461636 ARID5BQ14865 1188 aa10.38□□□□□ -0.75
THUMPD3-207ENST00000461636 WDR4P57081 412 aaKnown RBP10.37□□□□□ -0.75
THUMPD3-207ENST00000461636 CDK15Q96Q40 435 aa10.37□□□□□ -0.75
THUMPD3-207ENST00000461636 TIMP2P16035 220 aa10.36□□□□□ -0.75
THUMPD3-207ENST00000461636 SCARF1Q14162 830 aa10.36□□□□□ -0.75
THUMPD3-207ENST00000461636 WIPF1O43516 503 aa10.35□□□□□ -0.75
THUMPD3-207ENST00000461636 INSM1Q01101 510 aaPredicted RBP10.35□□□□□ -0.75
THUMPD3-207ENST00000461636 NR5A1Q13285 461 aa10.35□□□□□ -0.75
THUMPD3-207ENST00000461636 RTL5Q5HYW3 569 aaPredicted RBP10.35□□□□□ -0.75
THUMPD3-207ENST00000461636 SLC16A10Q8TF71 515 aa10.35□□□□□ -0.75
THUMPD3-207ENST00000461636 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
THUMPD3-207ENST00000461636 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
THUMPD3-207ENST00000461636 MRPL14Q6P1L8 145 aaKnown RBP10.34□□□□□ -0.75
THUMPD3-207ENST00000461636 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
THUMPD3-207ENST00000461636 NXF1Q9UBU9 619 aaKnown RBP10.34□□□□□ -0.75
THUMPD3-207ENST00000461636 C4orf48Q5BLP8 95 aa10.33□□□□□ -0.76
THUMPD3-207ENST00000461636 NPAS3Q8IXF0 933 aa10.32□□□□□ -0.76
THUMPD3-207ENST00000461636 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.76
THUMPD3-207ENST00000461636 ZIC2O95409 532 aaPredicted RBP10.31□□□□□ -0.76
THUMPD3-207ENST00000461636 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
THUMPD3-207ENST00000461636 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
THUMPD3-207ENST00000461636 PURBQ96QR8 312 aaKnown RBP10.3□□□□□ -0.76
THUMPD3-207ENST00000461636 C1QTNF2Q9BXJ5 285 aa10.3□□□□□ -0.76
THUMPD3-207ENST00000461636 KLF16Q9BXK1 252 aaPredicted RBP10.3□□□□□ -0.76
THUMPD3-207ENST00000461636 MAP4K5Q9Y4K4 846 aa10.3□□□□□ -0.76
THUMPD3-207ENST00000461636 MAGEB6P1A0A0J9YX57 407 aa10.29□□□□□ -0.76
THUMPD3-207ENST00000461636 SH3BP5LQ7L8J4 393 aa10.29□□□□□ -0.76
THUMPD3-207ENST00000461636 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
THUMPD3-207ENST00000461636 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
THUMPD3-207ENST00000461636 NR3C2P08235 984 aa10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 FSHRP23945 695 aa10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 SH3D19Q5HYK7 790 aa10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 TRMT44Q8IYL2 757 aaKnown RBP10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 STK17AQ9UEE5 414 aa10.28□□□□□ -0.76
THUMPD3-207ENST00000461636 UPP2O95045 317 aa10.27□□□□□ -0.77
THUMPD3-207ENST00000461636 GRM5P41594 1212 aa10.27□□□□□ -0.77
THUMPD3-207ENST00000461636 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.77
THUMPD3-207ENST00000461636 IRF7Q92985 503 aa10.27□□□□□ -0.77
THUMPD3-207ENST00000461636 ZFAND3Q9H8U3 227 aa10.27□□□□□ -0.77
THUMPD3-207ENST00000461636 CTDSPL2Q05D32 466 aa10.26□□□□□ -0.77
THUMPD3-207ENST00000461636 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
THUMPD3-207ENST00000461636 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
THUMPD3-207ENST00000461636 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
THUMPD3-207ENST00000461636 H3BM21 787 aa10.23□□□□□ -0.77
THUMPD3-207ENST00000461636 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
THUMPD3-207ENST00000461636 MEIOBQ8N635 442 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms