RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 CCDC88BA6NC98 1476 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 ZBTB7CA1YPR0 619 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
DDX1-204ENST00000459706 APLP1P51693 650 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 KCTD17Q8N5Z5 321 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
DDX1-204ENST00000459706 JUNDP17535 347 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 VAC14Q08AM6 782 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 SEMA3FQ13275 785 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 BLOC1S3Q6QNY0 202 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 RNF19BQ6ZMZ0 732 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 EPS8L1Q8TE68 723 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 GPKOWQ92917 476 aaPredicted RBP eCLIP9.53□□□□□ -0.88
DDX1-204ENST00000459706 PBXIP1Q96AQ6 731 aa9.53□□□□□ -0.88
DDX1-204ENST00000459706 MCCD1P59942 119 aaPredicted RBP9.52□□□□□ -0.89
DDX1-204ENST00000459706 NR1H3Q13133 447 aa9.52□□□□□ -0.89
DDX1-204ENST00000459706 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
DDX1-204ENST00000459706 BCAMP50895 628 aa9.51□□□□□ -0.89
DDX1-204ENST00000459706 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
DDX1-204ENST00000459706 PPP1R12CQ9BZL4 782 aa9.51□□□□□ -0.89
DDX1-204ENST00000459706 PODXL2Q9NZ53 605 aa9.51□□□□□ -0.89
DDX1-204ENST00000459706 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
DDX1-204ENST00000459706 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
DDX1-204ENST00000459706 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
DDX1-204ENST00000459706 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
DDX1-204ENST00000459706 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
DDX1-204ENST00000459706 ZBBXA8MT70 800 aa9.49□□□□□ -0.89
DDX1-204ENST00000459706 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
DDX1-204ENST00000459706 DXOO77932 396 aaKnown RBP9.48□□□□□ -0.89
DDX1-204ENST00000459706 MMP16P51512 607 aa9.48□□□□□ -0.89
DDX1-204ENST00000459706 PATL2C9JE40 543 aaKnown RBP9.47□□□□□ -0.89
DDX1-204ENST00000459706 THSD4Q6ZMP0 1018 aa9.47□□□□□ -0.89
DDX1-204ENST00000459706 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
DDX1-204ENST00000459706 SPSB2Q99619 263 aa9.47□□□□□ -0.89
DDX1-204ENST00000459706 WBP1LQ9NX94 342 aa9.47□□□□□ -0.89
DDX1-204ENST00000459706 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
DDX1-204ENST00000459706 CCNYL3P0C7X3 344 aa9.46□□□□□ -0.9
DDX1-204ENST00000459706 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.9
DDX1-204ENST00000459706 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
DDX1-204ENST00000459706 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
DDX1-204ENST00000459706 PCDH10Q9P2E7 1040 aa9.46□□□□□ -0.9
DDX1-204ENST00000459706 USTQ9Y2C2 406 aa9.46□□□□□ -0.9
DDX1-204ENST00000459706 PTK2Q05397 1052 aa9.45□□□□□ -0.9
DDX1-204ENST00000459706 KCNH2Q12809 1159 aa9.45□□□□□ -0.9
DDX1-204ENST00000459706 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
DDX1-204ENST00000459706 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
DDX1-204ENST00000459706 TFIP11Q9UBB9 837 aaKnown RBP9.44□□□□□ -0.9
DDX1-204ENST00000459706 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
DDX1-204ENST00000459706 CTHP32929 405 aa9.43□□□□□ -0.9
DDX1-204ENST00000459706 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
DDX1-204ENST00000459706 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
DDX1-204ENST00000459706 CFTRP13569 1480 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 ATP9BO43861 1147 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
DDX1-204ENST00000459706 ZPR1O75312 459 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 ADH1BP00325 375 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
DDX1-204ENST00000459706 ATG7O95352 703 aa9.41□□□□□ -0.9
DDX1-204ENST00000459706 LMOD1P29536 600 aaPredicted RBP9.41□□□□□ -0.9
DDX1-204ENST00000459706 UCN2Q96RP3 112 aa9.41□□□□□ -0.9
DDX1-204ENST00000459706 RFX1P22670 979 aa9.4□□□□□ -0.9
DDX1-204ENST00000459706 MAP10Q9P2G4 905 aa9.4□□□□□ -0.9
DDX1-204ENST00000459706 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.9
DDX1-204ENST00000459706 CADPSQ9ULU8 1353 aa9.39□□□□□ -0.91
DDX1-204ENST00000459706 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
DDX1-204ENST00000459706 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
DDX1-204ENST00000459706 IL21Q9HBE4 155 aa9.39□□□□□ -0.91
DDX1-204ENST00000459706 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.38□□□□□ -0.91
DDX1-204ENST00000459706 COPS2P61201 443 aa9.38□□□□□ -0.91
DDX1-204ENST00000459706 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
DDX1-204ENST00000459706 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
DDX1-204ENST00000459706 BRD1O95696 1058 aa9.37□□□□□ -0.91
DDX1-204ENST00000459706 ELOAQ14241 798 aaKnown RBP9.37□□□□□ -0.91
DDX1-204ENST00000459706 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
DDX1-204ENST00000459706 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
DDX1-204ENST00000459706 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
DDX1-204ENST00000459706 MTRQ99707 1265 aa9.36□□□□□ -0.91
DDX1-204ENST00000459706 SLC6A16Q9GZN6 736 aa9.36□□□□□ -0.91
DDX1-204ENST00000459706 CCDC9Q9Y3X0 531 aaKnown RBP9.36□□□□□ -0.91
DDX1-204ENST00000459706 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
DDX1-204ENST00000459706 KCNA1Q09470 495 aa9.34□□□□□ -0.91
DDX1-204ENST00000459706 MAP7D1Q3KQU3 841 aa9.34□□□□□ -0.91
DDX1-204ENST00000459706 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
DDX1-204ENST00000459706 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
DDX1-204ENST00000459706 AEBP1Q8IUX7 1158 aa9.33□□□□□ -0.92
DDX1-204ENST00000459706 ARHGAP9Q9BRR9 750 aa9.33□□□□□ -0.92
DDX1-204ENST00000459706 PDS5BQ9NTI5 1447 aa9.32□□□□□ -0.92
DDX1-204ENST00000459706 SKIP12755 728 aa9.32□□□□□ -0.92
DDX1-204ENST00000459706 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
DDX1-204ENST00000459706 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
DDX1-204ENST00000459706 ZBTB33Q86T24 672 aa9.32□□□□□ -0.92
DDX1-204ENST00000459706 UNC93B1Q9H1C4 597 aa9.32□□□□□ -0.92
DDX1-204ENST00000459706 B4GALNT3Q6L9W6 998 aa9.31□□□□□ -0.92
DDX1-204ENST00000459706 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
DDX1-204ENST00000459706 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
DDX1-204ENST00000459706 BPHLQ86WA6 291 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms