RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 EDC4Q6P2E9 1401 aaKnown RBP11.59□□□□□ -0.55
RPE-216ENST00000454822 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
RPE-216ENST00000454822 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
RPE-216ENST00000454822 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
RPE-216ENST00000454822 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.58□□□□□ -0.56
RPE-216ENST00000454822 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
RPE-216ENST00000454822 NME9Q86XW9 330 aa11.58□□□□□ -0.56
RPE-216ENST00000454822 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
RPE-216ENST00000454822 PNPLA6Q8IY17 1366 aa11.58□□□□□ -0.56
RPE-216ENST00000454822 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
RPE-216ENST00000454822 FBLN1P23142 703 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 NKTRP30414 1462 aaKnown RBP11.57□□□□□ -0.56
RPE-216ENST00000454822 CDC42BPGQ6DT37 1551 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
RPE-216ENST00000454822 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
RPE-216ENST00000454822 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
RPE-216ENST00000454822 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
RPE-216ENST00000454822 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
RPE-216ENST00000454822 RBM19Q9Y4C8 960 aaKnown RBP11.56□□□□□ -0.56
RPE-216ENST00000454822 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
RPE-216ENST00000454822 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
RPE-216ENST00000454822 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
RPE-216ENST00000454822 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.54□□□□□ -0.56
RPE-216ENST00000454822 COG3Q96JB2 828 aa11.54□□□□□ -0.56
RPE-216ENST00000454822 AKAP12Q02952 1782 aa11.54□□□□□ -0.56
RPE-216ENST00000454822 MON2Q7Z3U7 1717 aa11.54□□□□□ -0.56
RPE-216ENST00000454822 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
RPE-216ENST00000454822 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
RPE-216ENST00000454822 ACEP12821 1306 aa11.54□□□□□ -0.56
RPE-216ENST00000454822 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
RPE-216ENST00000454822 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
RPE-216ENST00000454822 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
RPE-216ENST00000454822 PTCH1Q13635 1447 aa11.53□□□□□ -0.56
RPE-216ENST00000454822 AATKQ6ZMQ8 1374 aa11.53□□□□□ -0.56
RPE-216ENST00000454822 BCAR3O75815 825 aa11.53□□□□□ -0.56
RPE-216ENST00000454822 ITSN1Q15811 1721 aa11.53□□□□□ -0.56
RPE-216ENST00000454822 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
RPE-216ENST00000454822 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.56
RPE-216ENST00000454822 FCHSD2O94868 740 aa11.52□□□□□ -0.57
RPE-216ENST00000454822 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
RPE-216ENST00000454822 ANKLE2Q86XL3 938 aa11.51□□□□□ -0.57
RPE-216ENST00000454822 KCNA6P17658 529 aa11.51□□□□□ -0.57
RPE-216ENST00000454822 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
RPE-216ENST00000454822 PIK3R4Q99570 1358 aa11.51□□□□□ -0.57
RPE-216ENST00000454822 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
RPE-216ENST00000454822 TOPAZ1Q8N9V7 1692 aa11.5□□□□□ -0.57
RPE-216ENST00000454822 IL13P35225 146 aa11.5□□□□□ -0.57
RPE-216ENST00000454822 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
RPE-216ENST00000454822 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
RPE-216ENST00000454822 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
RPE-216ENST00000454822 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
RPE-216ENST00000454822 RIPK4P57078 832 aa11.49□□□□□ -0.57
RPE-216ENST00000454822 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
RPE-216ENST00000454822 USP6P35125 1406 aa11.49□□□□□ -0.57
RPE-216ENST00000454822 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
RPE-216ENST00000454822 PRKAR2BP31323 418 aa11.48□□□□□ -0.57
RPE-216ENST00000454822 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
RPE-216ENST00000454822 RARSP54136 660 aaKnown RBP11.48□□□□□ -0.57
RPE-216ENST00000454822 SSH2Q76I76 1423 aa11.47□□□□□ -0.57
RPE-216ENST00000454822 HMOX1P09601 288 aa11.47□□□□□ -0.57
RPE-216ENST00000454822 NRKQ7Z2Y5 1582 aa11.47□□□□□ -0.57
RPE-216ENST00000454822 NEFMP07197 916 aa11.47□□□□□ -0.57
RPE-216ENST00000454822 NGDNQ8NEJ9 315 aaKnown RBP11.47□□□□□ -0.57
RPE-216ENST00000454822 IL16Q14005 1332 aa11.46□□□□□ -0.57
RPE-216ENST00000454822 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
RPE-216ENST00000454822 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
RPE-216ENST00000454822 OVOS2A0A0J9YW53 1432 aa11.46□□□□□ -0.58
RPE-216ENST00000454822 OVOS2Q6IE36 1432 aa11.46□□□□□ -0.58
RPE-216ENST00000454822 TTC21AQ8NDW8 1320 aa11.45□□□□□ -0.58
RPE-216ENST00000454822 ZNF142P52746 1687 aaPredicted RBP11.45□□□□□ -0.58
RPE-216ENST00000454822 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
RPE-216ENST00000454822 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
RPE-216ENST00000454822 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
RPE-216ENST00000454822 FANCIQ9NVI1 1328 aa11.45□□□□□ -0.58
RPE-216ENST00000454822 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
RPE-216ENST00000454822 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
RPE-216ENST00000454822 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
RPE-216ENST00000454822 ANKARQ7Z5J8 1434 aa11.44□□□□□ -0.58
RPE-216ENST00000454822 CT47B1P0C2W7 299 aaPredicted RBP11.44□□□□□ -0.58
RPE-216ENST00000454822 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
RPE-216ENST00000454822 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
RPE-216ENST00000454822 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
RPE-216ENST00000454822 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
RPE-216ENST00000454822 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
RPE-216ENST00000454822 PANK1Q8TE04 598 aa11.42□□□□□ -0.58
RPE-216ENST00000454822 BCL2L13Q9BXK5 485 aa11.42□□□□□ -0.58
RPE-216ENST00000454822 TCERG1O14776 1098 aaKnown RBP11.42□□□□□ -0.58
RPE-216ENST00000454822 SOX12O15370 315 aa11.41□□□□□ -0.58
RPE-216ENST00000454822 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
RPE-216ENST00000454822 RBM33Q96EV2 1170 aaKnown RBP11.41□□□□□ -0.58
RPE-216ENST00000454822 COG6Q9Y2V7 657 aa11.41□□□□□ -0.58
RPE-216ENST00000454822 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
RPE-216ENST00000454822 NALCNQ8IZF0 1738 aa11.41□□□□□ -0.58
RPE-216ENST00000454822 FMN2Q9NZ56 1722 aa11.41□□□□□ -0.58
RPE-216ENST00000454822 CENPQQ7L2Z9 268 aaPredicted RBP11.41□□□□□ -0.58
RPE-216ENST00000454822 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms