RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 THEMISQ8N1K5 641 aaPredicted RBP7.17□□□□□ -1.26
RIF1-207ENST00000454583 KCNA6P17658 529 aa7.16□□□□□ -1.26
RIF1-207ENST00000454583 AMER1Q5JTC6 1135 aaPredicted RBP7.16□□□□□ -1.26
RIF1-207ENST00000454583 EIF3AQ14152 1382 aaKnown RBP7.16□□□□□ -1.26
RIF1-207ENST00000454583 ST20-MTHFSA0A0A6YYL1 179 aa7.16□□□□□ -1.26
RIF1-207ENST00000454583 EDC4Q6P2E9 1401 aaKnown RBP7.16□□□□□ -1.26
RIF1-207ENST00000454583 MLECQ14165 292 aa7.15□□□□□ -1.26
RIF1-207ENST00000454583 LRP6O75581 1613 aa7.15□□□□□ -1.26
RIF1-207ENST00000454583 ITGB4P16144 1822 aa7.15□□□□□ -1.26
RIF1-207ENST00000454583 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
RIF1-207ENST00000454583 NEUROD1Q13562 356 aa7.15□□□□□ -1.27
RIF1-207ENST00000454583 COL5A3P25940 1745 aaPredicted RBP7.14□□□□□ -1.27
RIF1-207ENST00000454583 BRWD3Q6RI45 1802 aa7.14□□□□□ -1.27
RIF1-207ENST00000454583 PPIP5K1Q6PFW1 1433 aa7.14□□□□□ -1.27
RIF1-207ENST00000454583 USP19O94966 1318 aa7.14□□□□□ -1.27
RIF1-207ENST00000454583 AATKQ6ZMQ8 1374 aa7.14□□□□□ -1.27
RIF1-207ENST00000454583 KTN1Q86UP2 1357 aaKnown RBP7.14□□□□□ -1.27
RIF1-207ENST00000454583 TMEM132EQ6IEE7 984 aa7.14□□□□□ -1.27
RIF1-207ENST00000454583 LAMB4A4D0S4 1761 aa7.13□□□□□ -1.27
RIF1-207ENST00000454583 CENPJQ9HC77 1338 aaPredicted RBP7.13□□□□□ -1.27
RIF1-207ENST00000454583 LY75O60449 1722 aa7.13□□□□□ -1.27
RIF1-207ENST00000454583 QSER1Q2KHR3 1735 aa7.13□□□□□ -1.27
RIF1-207ENST00000454583 C5P01031 1676 aa7.13□□□□□ -1.27
RIF1-207ENST00000454583 MRC1P22897 1456 aa7.12□□□□□ -1.27
RIF1-207ENST00000454583 NSD2O96028 1365 aa7.12□□□□□ -1.27
RIF1-207ENST00000454583 TNS1Q9HBL0 1735 aaKnown RBP7.12□□□□□ -1.27
RIF1-207ENST00000454583 PLEKHG2Q9H7P9 1386 aa7.12□□□□□ -1.27
RIF1-207ENST00000454583 TXNDC2Q86VQ3 553 aa7.12□□□□□ -1.27
RIF1-207ENST00000454583 SBNO1A3KN83 1393 aa7.11□□□□□ -1.27
RIF1-207ENST00000454583 ATAD2Q6PL18 1390 aa7.11□□□□□ -1.27
RIF1-207ENST00000454583 WASLO00401 505 aaPredicted RBP7.1□□□□□ -1.27
RIF1-207ENST00000454583 RGL3Q3MIN7 710 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 TAF1LQ8IZX4 1826 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 TMEM94Q12767 1356 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 WAPLQ7Z5K2 1190 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 ANKLE2Q86XL3 938 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 AMOTL2Q9Y2J4 779 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 TJP1Q07157 1748 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 NUP188Q5SRE5 1749 aa7.1□□□□□ -1.27
RIF1-207ENST00000454583 EIF4G2P78344 907 aaKnown RBP eCLIP7.1□□□□□ -1.27
RIF1-207ENST00000454583 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
RIF1-207ENST00000454583 TUBGCP6Q96RT7 1819 aa7.09□□□□□ -1.27
RIF1-207ENST00000454583 DIEXFQ68CQ4 756 aaKnown RBP7.09□□□□□ -1.27
RIF1-207ENST00000454583 PRAM1Q96QH2 718 aa7.09□□□□□ -1.27
RIF1-207ENST00000454583 SOS2Q07890 1332 aaPredicted RBP7.09□□□□□ -1.27
RIF1-207ENST00000454583 ZNF335Q9H4Z2 1342 aaPredicted RBP7.09□□□□□ -1.27
RIF1-207ENST00000454583 NUTM2DQ5VT03 806 aaPredicted RBP7.09□□□□□ -1.28
RIF1-207ENST00000454583 NHSQ6T4R5 1651 aa7.08□□□□□ -1.28
RIF1-207ENST00000454583 SAMD1Q6SPF0 538 aaPredicted RBP7.08□□□□□ -1.28
RIF1-207ENST00000454583 NSD3Q9BZ95 1437 aa7.08□□□□□ -1.28
RIF1-207ENST00000454583 DISP2A7MBM2 1401 aa7.07□□□□□ -1.28
RIF1-207ENST00000454583 TNS3Q68CZ2 1445 aa7.07□□□□□ -1.28
RIF1-207ENST00000454583 SLIT2O94813 1529 aa7.07□□□□□ -1.28
RIF1-207ENST00000454583 CPDO75976 1380 aa7.07□□□□□ -1.28
RIF1-207ENST00000454583 HSPA2P54652 639 aa7.07□□□□□ -1.28
RIF1-207ENST00000454583 MIER1Q8N108 512 aa7.07□□□□□ -1.28
RIF1-207ENST00000454583 KIF24Q5T7B8 1368 aa7.06□□□□□ -1.28
RIF1-207ENST00000454583 BCORQ6W2J9 1755 aa7.06□□□□□ -1.28
RIF1-207ENST00000454583 KDRP35968 1356 aa7.06□□□□□ -1.28
RIF1-207ENST00000454583 DOT1LQ8TEK3 1739 aa7.06□□□□□ -1.28
RIF1-207ENST00000454583 KDM2AQ9Y2K7 1162 aa7.05□□□□□ -1.28
RIF1-207ENST00000454583 SLC26A8Q96RN1 970 aa7.05□□□□□ -1.28
RIF1-207ENST00000454583 CDK19Q9BWU1 502 aa7.05□□□□□ -1.28
RIF1-207ENST00000454583 ZNF521Q96K83 1311 aa7.05□□□□□ -1.28
RIF1-207ENST00000454583 CCDC184Q52MB2 194 aa7.04□□□□□ -1.28
RIF1-207ENST00000454583 A0A1B0GUL6 1792 aa7.04□□□□□ -1.28
RIF1-207ENST00000454583 U3KPZ7 1027 aaPredicted RBP7.04□□□□□ -1.28
RIF1-207ENST00000454583 CACNA1FO60840 1977 aa7.04□□□□□ -1.28
RIF1-207ENST00000454583 TRAK1Q9UPV9 953 aa7.04□□□□□ -1.28
RIF1-207ENST00000454583 RTL1A6NKG5 1358 aa7.03□□□□□ -1.28
RIF1-207ENST00000454583 PRKRIP1Q9H875 184 aaPredicted RBP7.03□□□□□ -1.28
RIF1-207ENST00000454583 EP400Q96L91 3159 aa7.03□□□□□ -1.28
RIF1-207ENST00000454583 EVC2Q86UK5 1308 aa7.03□□□□□ -1.28
RIF1-207ENST00000454583 FYB1O15117 783 aa7.02□□□□□ -1.29
RIF1-207ENST00000454583 HDGFP51858 240 aaKnown RBP7.02□□□□□ -1.29
RIF1-207ENST00000454583 COL5A2P05997 1499 aaPredicted RBP7.02□□□□□ -1.29
RIF1-207ENST00000454583 HIRIP3Q9BW71 556 aaPredicted RBP7.02□□□□□ -1.29
RIF1-207ENST00000454583 LAMB2P55268 1798 aa7.01□□□□□ -1.29
RIF1-207ENST00000454583 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
RIF1-207ENST00000454583 EID1Q9Y6B2 187 aa7.01□□□□□ -1.29
RIF1-207ENST00000454583 ZNF646O15015 1829 aaPredicted RBP7.01□□□□□ -1.29
RIF1-207ENST00000454583 ANKRD36CQ5JPF3 1778 aa7.01□□□□□ -1.29
RIF1-207ENST00000454583 BRINP3Q76B58 766 aa7.01□□□□□ -1.29
RIF1-207ENST00000454583 NUDT16Q96DE0 195 aaKnown RBP7.01□□□□□ -1.29
RIF1-207ENST00000454583 SLC24A1O60721 1099 aa7□□□□□ -1.29
RIF1-207ENST00000454583 PLEKHF1Q96S99 279 aa7□□□□□ -1.29
RIF1-207ENST00000454583 SLC12A5Q9H2X9 1139 aa7□□□□□ -1.29
RIF1-207ENST00000454583 TMF1P82094 1093 aa7□□□□□ -1.29
RIF1-207ENST00000454583 CABP2Q9NPB3 220 aa7□□□□□ -1.29
RIF1-207ENST00000454583 MYT1LQ9UL68 1186 aa7□□□□□ -1.29
RIF1-207ENST00000454583 C4AP0C0L4 1744 aa7□□□□□ -1.29
RIF1-207ENST00000454583 C4BP0C0L5 1744 aa7□□□□□ -1.29
RIF1-207ENST00000454583 TTC21AQ8NDW8 1320 aa7□□□□□ -1.29
RIF1-207ENST00000454583 OVOS2A0A0G2JMS6 1433 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 ACEP12821 1306 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 CCER2I3L3R5 266 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 C19orf44Q9H6X5 657 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 BCL9LQ86UU0 1499 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 KIAA1551Q9HCM1 1747 aa6.99□□□□□ -1.29
RIF1-207ENST00000454583 PANK3Q9H999 370 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms