RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 PLEKHG5O94827 1062 aa27.3■■□□□ 1.96
SNX11-203ENST00000452859 ILDR2Q71H61 639 aa27.3■■□□□ 1.96
SNX11-203ENST00000452859 AFF2P51816 1311 aa27.29■■□□□ 1.96
SNX11-203ENST00000452859 TMF1P82094 1093 aa27.29■■□□□ 1.96
SNX11-203ENST00000452859 CABLES1Q8TDN4 633 aa27.28■■□□□ 1.96
SNX11-203ENST00000452859 TMC1Q8TDI8 760 aa27.27■■□□□ 1.96
SNX11-203ENST00000452859 ALS2Q96Q42 1657 aa27.26■■□□□ 1.95
SNX11-203ENST00000452859 ABTB2Q8N961 1025 aa27.26■■□□□ 1.95
SNX11-203ENST00000452859 CDCA8Q53HL2 280 aa27.25■■□□□ 1.95
SNX11-203ENST00000452859 POTEAQ6S8J7 498 aa27.25■■□□□ 1.95
SNX11-203ENST00000452859 USP6P35125 1406 aa27.25■■□□□ 1.95
SNX11-203ENST00000452859 EIF4G2P78344 907 aaKnown RBP eCLIP27.23■■□□□ 1.95
SNX11-203ENST00000452859 FNBP4Q8N3X1 1017 aaPredicted RBP27.23■■□□□ 1.95
SNX11-203ENST00000452859 USP21Q9UK80 565 aa27.22■■□□□ 1.95
SNX11-203ENST00000452859 HDGFL2Q7Z4V5 671 aaPredicted RBP27.21■■□□□ 1.95
SNX11-203ENST00000452859 NUTM2GQ5VZR2 741 aa27.2■■□□□ 1.95
SNX11-203ENST00000452859 NLRP13Q86W25 1043 aa27.2■■□□□ 1.95
SNX11-203ENST00000452859 TERF2IPQ9NYB0 399 aa27.2■■□□□ 1.95
SNX11-203ENST00000452859 NINLQ9Y2I6 1382 aa27.2■■□□□ 1.94
SNX11-203ENST00000452859 CPSF1Q10570 1443 aaKnown RBP27.19■■□□□ 1.94
SNX11-203ENST00000452859 KTN1Q86UP2 1357 aaKnown RBP27.19■■□□□ 1.94
SNX11-203ENST00000452859 MARF1Q9Y4F3 1742 aaKnown RBP27.19■■□□□ 1.94
SNX11-203ENST00000452859 SLC12A5Q9H2X9 1139 aa27.19■■□□□ 1.94
SNX11-203ENST00000452859 QTRT2Q9H974 415 aaKnown RBP27.17■■□□□ 1.94
SNX11-203ENST00000452859 TTC21AQ8NDW8 1320 aa27.16■■□□□ 1.94
SNX11-203ENST00000452859 RXRBP28702 533 aa27.16■■□□□ 1.94
SNX11-203ENST00000452859 TTC21BQ7Z4L5 1316 aa27.15■■□□□ 1.94
SNX11-203ENST00000452859 NLRP6P59044 892 aa27.15■■□□□ 1.94
SNX11-203ENST00000452859 TRPC5Q9UL62 973 aaPredicted RBP27.15■■□□□ 1.94
SNX11-203ENST00000452859 SSH2Q76I76 1423 aa27.15■■□□□ 1.94
SNX11-203ENST00000452859 ABCA3Q99758 1704 aa27.15■■□□□ 1.94
SNX11-203ENST00000452859 AKAP12Q02952 1782 aa27.14■■□□□ 1.93
SNX11-203ENST00000452859 HSPA5P11021 654 aaKnown RBP27.12■■□□□ 1.93
SNX11-203ENST00000452859 FAM83GA6ND36 823 aa27.11■■□□□ 1.93
SNX11-203ENST00000452859 RBM6P78332 1123 aaKnown RBP27.11■■□□□ 1.93
SNX11-203ENST00000452859 UNC5CLQ8IV45 518 aa27.11■■□□□ 1.93
SNX11-203ENST00000452859 PRDM11Q9NQV5 511 aa27.11■■□□□ 1.93
SNX11-203ENST00000452859 USP19O94966 1318 aa27.1■■□□□ 1.93
SNX11-203ENST00000452859 SLIT2O94813 1529 aa27.1■■□□□ 1.93
SNX11-203ENST00000452859 BCL9LQ86UU0 1499 aa27.1■■□□□ 1.93
SNX11-203ENST00000452859 CD163L1Q9NR16 1453 aa27.1■■□□□ 1.93
SNX11-203ENST00000452859 A0A1W2PP64 1363 aa27.08■■□□□ 1.93
SNX11-203ENST00000452859 GCP02774 474 aa27.08■■□□□ 1.93
SNX11-203ENST00000452859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.08■■□□□ 1.93
SNX11-203ENST00000452859 CRYBG1Q9Y4K1 1723 aa27.08■■□□□ 1.93
SNX11-203ENST00000452859 MON2Q7Z3U7 1717 aa27.07■■□□□ 1.92
SNX11-203ENST00000452859 EDC4Q6P2E9 1401 aaKnown RBP27.07■■□□□ 1.92
SNX11-203ENST00000452859 ZC3H6P61129 1189 aaKnown RBP27.07■■□□□ 1.92
SNX11-203ENST00000452859 SOCS7O14512 581 aa27.06■■□□□ 1.92
SNX11-203ENST00000452859 KIAA0232Q92628 1395 aa27.06■■□□□ 1.92
SNX11-203ENST00000452859 PHRF1Q9P1Y6 1649 aaKnown RBP27.06■■□□□ 1.92
SNX11-203ENST00000452859 ANKRD36BQ8N2N9 1353 aa27.05■■□□□ 1.92
SNX11-203ENST00000452859 ATRNO75882 1429 aa27.05■■□□□ 1.92
SNX11-203ENST00000452859 BTG4Q9NY30 223 aa27.05■■□□□ 1.92
SNX11-203ENST00000452859 KCNH5Q8NCM2 988 aa27.04■■□□□ 1.92
SNX11-203ENST00000452859 COL14A1Q05707 1796 aaKnown RBP27.04■■□□□ 1.92
SNX11-203ENST00000452859 NRKQ7Z2Y5 1582 aa27.03■■□□□ 1.92
SNX11-203ENST00000452859 PIK3C2AO00443 1686 aa27.03■■□□□ 1.92
SNX11-203ENST00000452859 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
SNX11-203ENST00000452859 NWD2Q9ULI1 1742 aa27.02■■□□□ 1.92
SNX11-203ENST00000452859 GJD4Q96KN9 370 aaPredicted RBP27.01■■□□□ 1.92
SNX11-203ENST00000452859 CPDO75976 1380 aa27.01■■□□□ 1.92
SNX11-203ENST00000452859 CDK12Q9NYV4 1490 aaPredicted RBP27.01■■□□□ 1.92
SNX11-203ENST00000452859 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.01■■□□□ 1.91
SNX11-203ENST00000452859 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.91
SNX11-203ENST00000452859 CHRNA2Q15822 529 aa27■■□□□ 1.91
SNX11-203ENST00000452859 VPS72Q15906 364 aa27■■□□□ 1.91
SNX11-203ENST00000452859 CCDC9Q9Y3X0 531 aaKnown RBP27■■□□□ 1.91
SNX11-203ENST00000452859 USP31Q70CQ4 1352 aa26.99■■□□□ 1.91
SNX11-203ENST00000452859 NME9Q86XW9 330 aa26.99■■□□□ 1.91
SNX11-203ENST00000452859 SLIT3O75094 1523 aa26.99■■□□□ 1.91
SNX11-203ENST00000452859 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
SNX11-203ENST00000452859 EVA1CP58658 441 aa26.95■■□□□ 1.91
SNX11-203ENST00000452859 SOX12O15370 315 aa26.94■■□□□ 1.9
SNX11-203ENST00000452859 ZRANB1Q9UGI0 708 aa26.94■■□□□ 1.9
SNX11-203ENST00000452859 COG3Q96JB2 828 aa26.92■■□□□ 1.9
SNX11-203ENST00000452859 STRN4Q9NRL3 753 aa26.92■■□□□ 1.9
SNX11-203ENST00000452859 AATKQ6ZMQ8 1374 aa26.9■■□□□ 1.9
SNX11-203ENST00000452859 ARHGEF25Q86VW2 580 aa26.9■■□□□ 1.9
SNX11-203ENST00000452859 RGS12O14924 1447 aa26.9■■□□□ 1.9
SNX11-203ENST00000452859 NRAPQ86VF7 1730 aa26.9■■□□□ 1.9
SNX11-203ENST00000452859 MYOM1P52179 1685 aa26.88■■□□□ 1.89
SNX11-203ENST00000452859 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
SNX11-203ENST00000452859 OVOS2A0A0J9YW53 1432 aa26.87■■□□□ 1.89
SNX11-203ENST00000452859 OVOS2Q6IE36 1432 aa26.87■■□□□ 1.89
SNX11-203ENST00000452859 SPATA31A5Q5VU36 1347 aa26.86■■□□□ 1.89
SNX11-203ENST00000452859 SPATA31A7Q8IWB4 1347 aa26.86■■□□□ 1.89
SNX11-203ENST00000452859 CAMTA1Q9Y6Y1 1673 aa26.86■■□□□ 1.89
SNX11-203ENST00000452859 FYB1O15117 783 aa26.86■■□□□ 1.89
SNX11-203ENST00000452859 CARD14Q9BXL6 1004 aa26.86■■□□□ 1.89
SNX11-203ENST00000452859 GLI3P10071 1580 aa26.85■■□□□ 1.89
SNX11-203ENST00000452859 NFAT5O94916 1531 aa26.85■■□□□ 1.89
SNX11-203ENST00000452859 C11orf95C9JLR9 678 aaPredicted RBP26.85■■□□□ 1.89
SNX11-203ENST00000452859 LMO7Q8WWI1 1683 aa26.84■■□□□ 1.89
SNX11-203ENST00000452859 NSD3Q9BZ95 1437 aa26.84■■□□□ 1.89
SNX11-203ENST00000452859 ONECUT3O60422 494 aaPredicted RBP26.83■■□□□ 1.89
SNX11-203ENST00000452859 A0A0G2JS52 829 aa26.83■■□□□ 1.88
SNX11-203ENST00000452859 MYT1Q01538 1121 aa26.83■■□□□ 1.88
SNX11-203ENST00000452859 GGNBP2Q9H3C7 697 aa26.83■■□□□ 1.88
SNX11-203ENST00000452859 CGNL1Q0VF96 1302 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms