RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 DUSP27Q5VZP5 1158 aa21.18■□□□□ 0.98
AP000253.1-201ENST00000449339 ANKLE2Q86XL3 938 aa21.18■□□□□ 0.98
AP000253.1-201ENST00000449339 NME9Q86XW9 330 aa21.18■□□□□ 0.98
AP000253.1-201ENST00000449339 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
AP000253.1-201ENST00000449339 KCNA6P17658 529 aa21.17■□□□□ 0.98
AP000253.1-201ENST00000449339 TOPAZ1Q8N9V7 1692 aa21.16■□□□□ 0.98
AP000253.1-201ENST00000449339 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
AP000253.1-201ENST00000449339 RBM19Q9Y4C8 960 aaKnown RBP21.15■□□□□ 0.98
AP000253.1-201ENST00000449339 COL3A1P02461 1466 aaPredicted RBP21.15■□□□□ 0.98
AP000253.1-201ENST00000449339 NKTRP30414 1462 aaKnown RBP21.14■□□□□ 0.97
AP000253.1-201ENST00000449339 U2AF1L5P0DN76 240 aaPredicted RBP21.13■□□□□ 0.97
AP000253.1-201ENST00000449339 U2AF1Q01081 240 aaKnown RBP eCLIP21.13■□□□□ 0.97
AP000253.1-201ENST00000449339 SLFN5Q08AF3 891 aa21.13■□□□□ 0.97
AP000253.1-201ENST00000449339 ACEP12821 1306 aa21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 RGPD8O14715 1765 aaPredicted RBP21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 EXOC6Q8TAG9 804 aa21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 RUNDC1Q96C34 613 aa21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 RRP7AQ9Y3A4 280 aaKnown RBP21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 MAP2P11137 1827 aaKnown RBP21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 SPINK5Q9NQ38 1064 aaPredicted RBP21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 DMRT2Q9Y5R5 561 aa21.12■□□□□ 0.97
AP000253.1-201ENST00000449339 NEUROD2Q15784 382 aa21.11■□□□□ 0.97
AP000253.1-201ENST00000449339 U2SURPO15042 1029 aaKnown RBP21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 PLIN1O60240 522 aa21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 CHD2O14647 1828 aaKnown RBP21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 PLEKHG3A1L390 1219 aa21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 POLKQ9UBT6 870 aa21.1■□□□□ 0.97
AP000253.1-201ENST00000449339 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
AP000253.1-201ENST00000449339 PMFBP1Q8TBY8 1022 aa21.09■□□□□ 0.97
AP000253.1-201ENST00000449339 RBM33Q96EV2 1170 aaKnown RBP21.09■□□□□ 0.97
AP000253.1-201ENST00000449339 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
AP000253.1-201ENST00000449339 E9PSI1 815 aa21.08■□□□□ 0.96
AP000253.1-201ENST00000449339 NRKQ7Z2Y5 1582 aa21.07■□□□□ 0.96
AP000253.1-201ENST00000449339 EMILIN1Q9Y6C2 1016 aa21.07■□□□□ 0.96
AP000253.1-201ENST00000449339 PNPLA6Q8IY17 1366 aa21.07■□□□□ 0.96
AP000253.1-201ENST00000449339 COG3Q96JB2 828 aa21.06■□□□□ 0.96
AP000253.1-201ENST00000449339 TTC21BQ7Z4L5 1316 aa21.06■□□□□ 0.96
AP000253.1-201ENST00000449339 DIAPH1O60610 1272 aaKnown RBP21.06■□□□□ 0.96
AP000253.1-201ENST00000449339 WWC1Q8IX03 1113 aa21.06■□□□□ 0.96
AP000253.1-201ENST00000449339 USP6P35125 1406 aa21.05■□□□□ 0.96
AP000253.1-201ENST00000449339 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
AP000253.1-201ENST00000449339 RRS1Q15050 365 aaKnown RBP21.04■□□□□ 0.96
AP000253.1-201ENST00000449339 NALCNQ8IZF0 1738 aa21.02■□□□□ 0.96
AP000253.1-201ENST00000449339 PLEKHF1Q96S99 279 aa21.01■□□□□ 0.95
AP000253.1-201ENST00000449339 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
AP000253.1-201ENST00000449339 NGDNQ8NEJ9 315 aaKnown RBP21.01■□□□□ 0.95
AP000253.1-201ENST00000449339 CRBNQ96SW2 442 aa21■□□□□ 0.95
AP000253.1-201ENST00000449339 AATKQ6ZMQ8 1374 aa21■□□□□ 0.95
AP000253.1-201ENST00000449339 C20orf194Q5TEA3 1177 aa21■□□□□ 0.95
AP000253.1-201ENST00000449339 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
AP000253.1-201ENST00000449339 SSH2Q76I76 1423 aa20.99■□□□□ 0.95
AP000253.1-201ENST00000449339 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.98■□□□□ 0.95
AP000253.1-201ENST00000449339 OVOS2A0A0J9YW53 1432 aa20.98■□□□□ 0.95
AP000253.1-201ENST00000449339 OVOS2Q6IE36 1432 aa20.98■□□□□ 0.95
AP000253.1-201ENST00000449339 ANKARQ7Z5J8 1434 aa20.97■□□□□ 0.95
AP000253.1-201ENST00000449339 CDK12Q9NYV4 1490 aaPredicted RBP20.97■□□□□ 0.95
AP000253.1-201ENST00000449339 CCDC27Q2M243 656 aa20.97■□□□□ 0.95
AP000253.1-201ENST00000449339 SOX12O15370 315 aa20.96■□□□□ 0.95
AP000253.1-201ENST00000449339 NCBP3Q53F19 620 aaKnown RBP20.96■□□□□ 0.95
AP000253.1-201ENST00000449339 LRRC7Q96NW7 1537 aa20.95■□□□□ 0.94
AP000253.1-201ENST00000449339 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
AP000253.1-201ENST00000449339 HMOX1P09601 288 aa20.94■□□□□ 0.94
AP000253.1-201ENST00000449339 IL13P35225 146 aa20.94■□□□□ 0.94
AP000253.1-201ENST00000449339 WDR63Q8IWG1 891 aa20.94■□□□□ 0.94
AP000253.1-201ENST00000449339 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
AP000253.1-201ENST00000449339 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
AP000253.1-201ENST00000449339 PRKAR2BP31323 418 aa20.92■□□□□ 0.94
AP000253.1-201ENST00000449339 TTC21AQ8NDW8 1320 aa20.92■□□□□ 0.94
AP000253.1-201ENST00000449339 BCAR3O75815 825 aa20.92■□□□□ 0.94
AP000253.1-201ENST00000449339 FCHSD2O94868 740 aa20.92■□□□□ 0.94
AP000253.1-201ENST00000449339 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
AP000253.1-201ENST00000449339 PIK3C2AO00443 1686 aa20.91■□□□□ 0.94
AP000253.1-201ENST00000449339 TRIM35Q9UPQ4 493 aa20.91■□□□□ 0.94
AP000253.1-201ENST00000449339 C14orf37Q86TY3 774 aa20.9■□□□□ 0.94
AP000253.1-201ENST00000449339 PEAK1Q9H792 1746 aa20.9■□□□□ 0.94
AP000253.1-201ENST00000449339 USP31Q70CQ4 1352 aa20.9■□□□□ 0.94
AP000253.1-201ENST00000449339 NUTM2GQ5VZR2 741 aa20.89■□□□□ 0.94
AP000253.1-201ENST00000449339 RIPK4P57078 832 aa20.89■□□□□ 0.93
AP000253.1-201ENST00000449339 PHACTR3Q96KR7 559 aa20.89■□□□□ 0.93
AP000253.1-201ENST00000449339 PHF8Q9UPP1 1060 aa20.88■□□□□ 0.93
AP000253.1-201ENST00000449339 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
AP000253.1-201ENST00000449339 NWD1Q149M9 1564 aa20.87■□□□□ 0.93
AP000253.1-201ENST00000449339 HSPA2P54652 639 aa20.87■□□□□ 0.93
AP000253.1-201ENST00000449339 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
AP000253.1-201ENST00000449339 PAK3O75914 559 aaPredicted RBP20.86■□□□□ 0.93
AP000253.1-201ENST00000449339 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
AP000253.1-201ENST00000449339 HSP90AB2PQ58FF8 381 aa20.86■□□□□ 0.93
AP000253.1-201ENST00000449339 MYH16Q9H6N6 1097 aa20.86■□□□□ 0.93
AP000253.1-201ENST00000449339 NLRP6P59044 892 aa20.85■□□□□ 0.93
AP000253.1-201ENST00000449339 ESCO1Q5FWF5 840 aa20.85■□□□□ 0.93
AP000253.1-201ENST00000449339 PROSER2Q86WR7 435 aaPredicted RBP20.85■□□□□ 0.93
AP000253.1-201ENST00000449339 MAP3K19Q56UN5 1328 aa20.84■□□□□ 0.93
AP000253.1-201ENST00000449339 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
AP000253.1-201ENST00000449339 TSR2Q969E8 191 aaKnown RBP20.84■□□□□ 0.93
AP000253.1-201ENST00000449339 AEBP1Q8IUX7 1158 aa20.82■□□□□ 0.92
AP000253.1-201ENST00000449339 ABTB2Q8N961 1025 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms