RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
COPS7B-213ENST00000449174 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
COPS7B-213ENST00000449174 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
COPS7B-213ENST00000449174 ATP7BP35670 1465 aa16.94■□□□□ 0.3
COPS7B-213ENST00000449174 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
COPS7B-213ENST00000449174 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
COPS7B-213ENST00000449174 NUDT16Q96DE0 195 aaKnown RBP16.91■□□□□ 0.3
COPS7B-213ENST00000449174 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
COPS7B-213ENST00000449174 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
COPS7B-213ENST00000449174 A0A0G2JS52 829 aa16.89■□□□□ 0.29
COPS7B-213ENST00000449174 MYT1Q01538 1121 aa16.89■□□□□ 0.29
COPS7B-213ENST00000449174 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
COPS7B-213ENST00000449174 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
COPS7B-213ENST00000449174 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
COPS7B-213ENST00000449174 CDK19Q9BWU1 502 aa16.88■□□□□ 0.29
COPS7B-213ENST00000449174 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
COPS7B-213ENST00000449174 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
COPS7B-213ENST00000449174 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
COPS7B-213ENST00000449174 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
COPS7B-213ENST00000449174 PLEKHG3A1L390 1219 aa16.86■□□□□ 0.29
COPS7B-213ENST00000449174 BAG6P46379 1132 aa16.86■□□□□ 0.29
COPS7B-213ENST00000449174 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
COPS7B-213ENST00000449174 RGPD1P0DJD0 1748 aa16.86■□□□□ 0.29
COPS7B-213ENST00000449174 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
COPS7B-213ENST00000449174 ACEP12821 1306 aa16.84■□□□□ 0.29
COPS7B-213ENST00000449174 BRD4O60885 1362 aaPredicted RBP16.83■□□□□ 0.28
COPS7B-213ENST00000449174 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
COPS7B-213ENST00000449174 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
COPS7B-213ENST00000449174 LRP5O75197 1615 aa16.81■□□□□ 0.28
COPS7B-213ENST00000449174 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
COPS7B-213ENST00000449174 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
COPS7B-213ENST00000449174 DISP2A7MBM2 1401 aa16.8■□□□□ 0.28
COPS7B-213ENST00000449174 CPDO75976 1380 aa16.8■□□□□ 0.28
COPS7B-213ENST00000449174 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
COPS7B-213ENST00000449174 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
COPS7B-213ENST00000449174 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
COPS7B-213ENST00000449174 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
COPS7B-213ENST00000449174 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
COPS7B-213ENST00000449174 SRPK2P78362 688 aaKnown RBP16.79■□□□□ 0.28
COPS7B-213ENST00000449174 USP19O94966 1318 aa16.78■□□□□ 0.28
COPS7B-213ENST00000449174 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
COPS7B-213ENST00000449174 CHRNA2Q15822 529 aa16.78■□□□□ 0.28
COPS7B-213ENST00000449174 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
COPS7B-213ENST00000449174 NLRP13Q86W25 1043 aa16.78■□□□□ 0.28
COPS7B-213ENST00000449174 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
COPS7B-213ENST00000449174 TNS1Q9HBL0 1735 aaKnown RBP16.78■□□□□ 0.28
COPS7B-213ENST00000449174 SSH2Q76I76 1423 aa16.78■□□□□ 0.28
COPS7B-213ENST00000449174 EVA1CP58658 441 aa16.77■□□□□ 0.28
COPS7B-213ENST00000449174 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
COPS7B-213ENST00000449174 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
COPS7B-213ENST00000449174 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.28
COPS7B-213ENST00000449174 THRAP3Q9Y2W1 955 aaKnown RBP16.75■□□□□ 0.27
COPS7B-213ENST00000449174 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
COPS7B-213ENST00000449174 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
COPS7B-213ENST00000449174 EN1Q05925 392 aaPredicted RBP16.74■□□□□ 0.27
COPS7B-213ENST00000449174 USP6P35125 1406 aa16.73■□□□□ 0.27
COPS7B-213ENST00000449174 GCP02774 474 aa16.73■□□□□ 0.27
COPS7B-213ENST00000449174 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
COPS7B-213ENST00000449174 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
COPS7B-213ENST00000449174 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
COPS7B-213ENST00000449174 TRPM1Q7Z4N2 1603 aa16.73■□□□□ 0.27
COPS7B-213ENST00000449174 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
COPS7B-213ENST00000449174 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
COPS7B-213ENST00000449174 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
COPS7B-213ENST00000449174 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
COPS7B-213ENST00000449174 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
COPS7B-213ENST00000449174 LARP1Q6PKG0 1096 aaKnown RBP16.71■□□□□ 0.27
COPS7B-213ENST00000449174 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
COPS7B-213ENST00000449174 SLIT3O75094 1523 aa16.7■□□□□ 0.26
COPS7B-213ENST00000449174 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
COPS7B-213ENST00000449174 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
COPS7B-213ENST00000449174 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
COPS7B-213ENST00000449174 TRIM37O94972 964 aa16.69■□□□□ 0.26
COPS7B-213ENST00000449174 CRB1P82279 1406 aa16.69■□□□□ 0.26
COPS7B-213ENST00000449174 AATKQ6ZMQ8 1374 aa16.68■□□□□ 0.26
COPS7B-213ENST00000449174 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
COPS7B-213ENST00000449174 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
COPS7B-213ENST00000449174 APBA3O96018 575 aa16.67■□□□□ 0.26
COPS7B-213ENST00000449174 NLRP6P59044 892 aa16.67■□□□□ 0.26
COPS7B-213ENST00000449174 EZH2Q15910 746 aaKnown RBP16.67■□□□□ 0.26
COPS7B-213ENST00000449174 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
COPS7B-213ENST00000449174 PIK3C2AO00443 1686 aa16.66■□□□□ 0.26
COPS7B-213ENST00000449174 RREB1Q92766 1687 aa16.66■□□□□ 0.26
COPS7B-213ENST00000449174 AKAP12Q02952 1782 aa16.65■□□□□ 0.26
COPS7B-213ENST00000449174 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
COPS7B-213ENST00000449174 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
COPS7B-213ENST00000449174 TTC21AQ8NDW8 1320 aa16.64■□□□□ 0.25
COPS7B-213ENST00000449174 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
COPS7B-213ENST00000449174 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
COPS7B-213ENST00000449174 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
COPS7B-213ENST00000449174 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
COPS7B-213ENST00000449174 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
COPS7B-213ENST00000449174 NUP188Q5SRE5 1749 aa16.62■□□□□ 0.25
COPS7B-213ENST00000449174 COL18A1P39060 1754 aa16.62■□□□□ 0.25
COPS7B-213ENST00000449174 NBPF14Q5TI25 921 aa16.62■□□□□ 0.25
COPS7B-213ENST00000449174 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
COPS7B-213ENST00000449174 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
COPS7B-213ENST00000449174 LRRC37A3O60309 1634 aa16.62■□□□□ 0.25
COPS7B-213ENST00000449174 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
COPS7B-213ENST00000449174 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms