RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SBNO2Q9Y2G9 1366 aa20.02■□□□□ 0.8
RTFDC1-204ENST00000449062 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.8
RTFDC1-204ENST00000449062 ALS2Q96Q42 1657 aa20.02■□□□□ 0.8
RTFDC1-204ENST00000449062 PPIP5K1Q6PFW1 1433 aa20.02■□□□□ 0.79
RTFDC1-204ENST00000449062 QRICH2Q9H0J4 1663 aa20.01■□□□□ 0.79
RTFDC1-204ENST00000449062 UNC5CLQ8IV45 518 aa20.01■□□□□ 0.79
RTFDC1-204ENST00000449062 PLEKHG5O94827 1062 aa20■□□□□ 0.79
RTFDC1-204ENST00000449062 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
RTFDC1-204ENST00000449062 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
RTFDC1-204ENST00000449062 TESK2Q96S53 571 aa19.98■□□□□ 0.79
RTFDC1-204ENST00000449062 SSH2Q76I76 1423 aa19.98■□□□□ 0.79
RTFDC1-204ENST00000449062 BRD4O60885 1362 aaPredicted RBP19.97■□□□□ 0.79
RTFDC1-204ENST00000449062 MARF1Q9Y4F3 1742 aaKnown RBP19.97■□□□□ 0.79
RTFDC1-204ENST00000449062 GJD4Q96KN9 370 aaPredicted RBP19.97■□□□□ 0.79
RTFDC1-204ENST00000449062 NUTM2GQ5VZR2 741 aa19.96■□□□□ 0.79
RTFDC1-204ENST00000449062 RGS12O14924 1447 aa19.95■□□□□ 0.78
RTFDC1-204ENST00000449062 ST20-MTHFSA0A0A6YYL1 179 aa19.95■□□□□ 0.78
RTFDC1-204ENST00000449062 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
RTFDC1-204ENST00000449062 PUS7Q96PZ0 661 aaKnown RBP19.95■□□□□ 0.78
RTFDC1-204ENST00000449062 VPS72Q15906 364 aa19.94■□□□□ 0.78
RTFDC1-204ENST00000449062 ZNF692Q9BU19 519 aaPredicted RBP19.94■□□□□ 0.78
RTFDC1-204ENST00000449062 USP6P35125 1406 aa19.93■□□□□ 0.78
RTFDC1-204ENST00000449062 USP19O94966 1318 aa19.93■□□□□ 0.78
RTFDC1-204ENST00000449062 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
RTFDC1-204ENST00000449062 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
RTFDC1-204ENST00000449062 ONECUT3O60422 494 aaPredicted RBP19.92■□□□□ 0.78
RTFDC1-204ENST00000449062 UPF1Q92900 1129 aaKnown RBP eCLIP19.92■□□□□ 0.78
RTFDC1-204ENST00000449062 ATAD2Q6PL18 1390 aa19.92■□□□□ 0.78
RTFDC1-204ENST00000449062 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
RTFDC1-204ENST00000449062 BTG4Q9NY30 223 aa19.91■□□□□ 0.78
RTFDC1-204ENST00000449062 CRYBG1Q9Y4K1 1723 aa19.9■□□□□ 0.78
RTFDC1-204ENST00000449062 GCP02774 474 aa19.89■□□□□ 0.77
RTFDC1-204ENST00000449062 ZC3H6P61129 1189 aaKnown RBP19.89■□□□□ 0.77
RTFDC1-204ENST00000449062 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
RTFDC1-204ENST00000449062 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
RTFDC1-204ENST00000449062 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
RTFDC1-204ENST00000449062 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.88■□□□□ 0.77
RTFDC1-204ENST00000449062 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
RTFDC1-204ENST00000449062 NLRP6P59044 892 aa19.87■□□□□ 0.77
RTFDC1-204ENST00000449062 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
RTFDC1-204ENST00000449062 GLI3P10071 1580 aa19.87■□□□□ 0.77
RTFDC1-204ENST00000449062 CD163L1Q9NR16 1453 aa19.86■□□□□ 0.77
RTFDC1-204ENST00000449062 CPDO75976 1380 aa19.86■□□□□ 0.77
RTFDC1-204ENST00000449062 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
RTFDC1-204ENST00000449062 CHRNA2Q15822 529 aa19.86■□□□□ 0.77
RTFDC1-204ENST00000449062 NWD2Q9ULI1 1742 aa19.85■□□□□ 0.77
RTFDC1-204ENST00000449062 KTN1Q86UP2 1357 aaKnown RBP19.83■□□□□ 0.77
RTFDC1-204ENST00000449062 USP47Q96K76 1375 aa19.83■□□□□ 0.77
RTFDC1-204ENST00000449062 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
RTFDC1-204ENST00000449062 TTC21AQ8NDW8 1320 aa19.83■□□□□ 0.77
RTFDC1-204ENST00000449062 PLCH1Q4KWH8 1693 aa19.83■□□□□ 0.76
RTFDC1-204ENST00000449062 SPATA31A5Q5VU36 1347 aa19.82■□□□□ 0.76
RTFDC1-204ENST00000449062 SPATA31A7Q8IWB4 1347 aa19.82■□□□□ 0.76
RTFDC1-204ENST00000449062 SEPT12Q8IYM1 358 aa19.82■□□□□ 0.76
RTFDC1-204ENST00000449062 TMC1Q8TDI8 760 aa19.82■□□□□ 0.76
RTFDC1-204ENST00000449062 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
RTFDC1-204ENST00000449062 ZRANB1Q9UGI0 708 aa19.8■□□□□ 0.76
RTFDC1-204ENST00000449062 NRAPQ86VF7 1730 aa19.79■□□□□ 0.76
RTFDC1-204ENST00000449062 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
RTFDC1-204ENST00000449062 SLIT3O75094 1523 aa19.79■□□□□ 0.76
RTFDC1-204ENST00000449062 USP31Q70CQ4 1352 aa19.79■□□□□ 0.76
RTFDC1-204ENST00000449062 NRKQ7Z2Y5 1582 aa19.78■□□□□ 0.76
RTFDC1-204ENST00000449062 CAMTA1Q9Y6Y1 1673 aa19.78■□□□□ 0.76
RTFDC1-204ENST00000449062 AKAP12Q02952 1782 aa19.78■□□□□ 0.76
RTFDC1-204ENST00000449062 TERF2IPQ9NYB0 399 aa19.78■□□□□ 0.76
RTFDC1-204ENST00000449062 SPATA31A1Q5TZJ5 1347 aa19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 TMF1P82094 1093 aa19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 FAM98CQ17RN3 349 aaKnown RBP19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 HDGFL2Q7Z4V5 671 aaPredicted RBP19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 ARHGEF25Q86VW2 580 aa19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 PIK3C2AO00443 1686 aa19.77■□□□□ 0.76
RTFDC1-204ENST00000449062 EP400Q96L91 3159 aa19.77■□□□□ 0.75
RTFDC1-204ENST00000449062 A0A1W2PP64 1363 aa19.76■□□□□ 0.75
RTFDC1-204ENST00000449062 AATKQ6ZMQ8 1374 aa19.76■□□□□ 0.75
RTFDC1-204ENST00000449062 NME9Q86XW9 330 aa19.76■□□□□ 0.75
RTFDC1-204ENST00000449062 AXIN2Q9Y2T1 843 aa19.76■□□□□ 0.75
RTFDC1-204ENST00000449062 NINLQ9Y2I6 1382 aa19.75■□□□□ 0.75
RTFDC1-204ENST00000449062 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
RTFDC1-204ENST00000449062 KCNH5Q8NCM2 988 aa19.75■□□□□ 0.75
RTFDC1-204ENST00000449062 STRN4Q9NRL3 753 aa19.75■□□□□ 0.75
RTFDC1-204ENST00000449062 EDC4Q6P2E9 1401 aaKnown RBP19.74■□□□□ 0.75
RTFDC1-204ENST00000449062 LMO7Q8WWI1 1683 aa19.73■□□□□ 0.75
RTFDC1-204ENST00000449062 EVA1CP58658 441 aa19.73■□□□□ 0.75
RTFDC1-204ENST00000449062 MON2Q7Z3U7 1717 aa19.72■□□□□ 0.75
RTFDC1-204ENST00000449062 KRT27Q7Z3Y8 459 aa19.72■□□□□ 0.75
RTFDC1-204ENST00000449062 BARGINQ6ZT62 677 aa19.71■□□□□ 0.75
RTFDC1-204ENST00000449062 CDCA8Q53HL2 280 aa19.7■□□□□ 0.74
RTFDC1-204ENST00000449062 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
RTFDC1-204ENST00000449062 COL5A2P05997 1499 aaPredicted RBP19.69■□□□□ 0.74
RTFDC1-204ENST00000449062 NFAT5O94916 1531 aa19.69■□□□□ 0.74
RTFDC1-204ENST00000449062 COL18A1P39060 1754 aa19.69■□□□□ 0.74
RTFDC1-204ENST00000449062 ANKRD36BQ8N2N9 1353 aa19.69■□□□□ 0.74
RTFDC1-204ENST00000449062 BRWD3Q6RI45 1802 aa19.68■□□□□ 0.74
RTFDC1-204ENST00000449062 TCP11L2Q8N4U5 519 aa19.68■□□□□ 0.74
RTFDC1-204ENST00000449062 SOX12O15370 315 aa19.67■□□□□ 0.74
RTFDC1-204ENST00000449062 ZBTB7CA1YPR0 619 aa19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
RTFDC1-204ENST00000449062 CARD14Q9BXL6 1004 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms