RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 SENP2Q9HC62 589 aa13.72□□□□□ -0.21
SMARCE1-206ENST00000447024 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
SMARCE1-206ENST00000447024 SSTR3P32745 418 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-206ENST00000447024 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.22
SMARCE1-206ENST00000447024 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
SMARCE1-206ENST00000447024 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
SMARCE1-206ENST00000447024 MS4A1P11836 297 aa13.69□□□□□ -0.22
SMARCE1-206ENST00000447024 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
SMARCE1-206ENST00000447024 SIAH2O43255 324 aa13.68□□□□□ -0.22
SMARCE1-206ENST00000447024 CCNYL3P0C7X3 344 aa13.68□□□□□ -0.22
SMARCE1-206ENST00000447024 NDUFV2P19404 249 aa13.67□□□□□ -0.22
SMARCE1-206ENST00000447024 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
SMARCE1-206ENST00000447024 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-206ENST00000447024 KIFC2Q96AC6 838 aa13.66□□□□□ -0.22
SMARCE1-206ENST00000447024 SH3BP2P78314 561 aa13.65□□□□□ -0.22
SMARCE1-206ENST00000447024 PTPRNQ16849 979 aa13.65□□□□□ -0.22
SMARCE1-206ENST00000447024 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
SMARCE1-206ENST00000447024 TERTO14746 1132 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-206ENST00000447024 AMHR2Q16671 573 aa13.63□□□□□ -0.23
SMARCE1-206ENST00000447024 LCE2CQ5TA81 110 aa13.63□□□□□ -0.23
SMARCE1-206ENST00000447024 UNC93B1Q9H1C4 597 aa13.63□□□□□ -0.23
SMARCE1-206ENST00000447024 WIPF1O43516 503 aa13.62□□□□□ -0.23
SMARCE1-206ENST00000447024 ZMYND10O75800 440 aa13.62□□□□□ -0.23
SMARCE1-206ENST00000447024 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-206ENST00000447024 PRR7Q8TB68 274 aa13.61□□□□□ -0.23
SMARCE1-206ENST00000447024 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
SMARCE1-206ENST00000447024 WASF2Q9Y6W5 498 aa13.61□□□□□ -0.23
SMARCE1-206ENST00000447024 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-206ENST00000447024 MTMR2Q13614 643 aa13.59□□□□□ -0.23
SMARCE1-206ENST00000447024 LINC01559Q495D7 138 aa13.59□□□□□ -0.23
SMARCE1-206ENST00000447024 BMP1P13497 986 aa13.58□□□□□ -0.24
SMARCE1-206ENST00000447024 KCNH2Q12809 1159 aa13.58□□□□□ -0.24
SMARCE1-206ENST00000447024 ZC3H15Q8WU90 426 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-206ENST00000447024 TRIM46Q7Z4K8 759 aa13.57□□□□□ -0.24
SMARCE1-206ENST00000447024 BAP1Q92560 729 aa13.57□□□□□ -0.24
SMARCE1-206ENST00000447024 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
SMARCE1-206ENST00000447024 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
SMARCE1-206ENST00000447024 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
SMARCE1-206ENST00000447024 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-206ENST00000447024 CAPN5O15484 640 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-206ENST00000447024 DESI1Q6ICB0 168 aa13.56□□□□□ -0.24
SMARCE1-206ENST00000447024 SOGA1O94964 1423 aa13.56□□□□□ -0.24
SMARCE1-206ENST00000447024 CUX1P39880 1505 aa13.55□□□□□ -0.24
SMARCE1-206ENST00000447024 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
SMARCE1-206ENST00000447024 INSM1Q01101 510 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-206ENST00000447024 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-206ENST00000447024 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
SMARCE1-206ENST00000447024 STK17AQ9UEE5 414 aa13.53□□□□□ -0.24
SMARCE1-206ENST00000447024 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
SMARCE1-206ENST00000447024 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-206ENST00000447024 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.25
SMARCE1-206ENST00000447024 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-206ENST00000447024 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
SMARCE1-206ENST00000447024 VARSP26640 1264 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-206ENST00000447024 GJA5P36382 358 aa13.5□□□□□ -0.25
SMARCE1-206ENST00000447024 DIXDC1Q155Q3 683 aa13.48□□□□□ -0.25
SMARCE1-206ENST00000447024 NXF1Q9UBU9 619 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-206ENST00000447024 PCDHB15Q9Y5E8 787 aa13.48□□□□□ -0.25
SMARCE1-206ENST00000447024 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
SMARCE1-206ENST00000447024 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 CTHP32929 405 aa13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 NNTQ13423 1086 aa13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 LYPD8Q6UX82 237 aa13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 MPNDQ8N594 471 aa13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 AQRO60306 1485 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCE1-206ENST00000447024 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
SMARCE1-206ENST00000447024 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
SMARCE1-206ENST00000447024 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
SMARCE1-206ENST00000447024 SPTLC1O15269 473 aa13.45□□□□□ -0.26
SMARCE1-206ENST00000447024 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
SMARCE1-206ENST00000447024 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-206ENST00000447024 TRIM66O15016 1216 aa13.44□□□□□ -0.26
SMARCE1-206ENST00000447024 HRCP23327 699 aa13.44□□□□□ -0.26
SMARCE1-206ENST00000447024 ZFP42Q96MM3 310 aa13.44□□□□□ -0.26
SMARCE1-206ENST00000447024 ZBTB3Q9H5J0 574 aa13.43□□□□□ -0.26
SMARCE1-206ENST00000447024 MAP10Q9P2G4 905 aa13.43□□□□□ -0.26
SMARCE1-206ENST00000447024 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
SMARCE1-206ENST00000447024 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-206ENST00000447024 F12P00748 615 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-206ENST00000447024 FAM174AQ8TBP5 190 aa13.41□□□□□ -0.26
SMARCE1-206ENST00000447024 TIMP2P16035 220 aa13.4□□□□□ -0.26
SMARCE1-206ENST00000447024 VEGFBP49765 207 aa13.4□□□□□ -0.26
SMARCE1-206ENST00000447024 NPAS3Q8IXF0 933 aa13.4□□□□□ -0.26
SMARCE1-206ENST00000447024 FOXJ1Q92949 421 aa13.4□□□□□ -0.26
SMARCE1-206ENST00000447024 ADH1CP00326 375 aa13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 WDR4P57081 412 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
SMARCE1-206ENST00000447024 GMPRP36959 345 aa13.38□□□□□ -0.27
SMARCE1-206ENST00000447024 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
SMARCE1-206ENST00000447024 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
SMARCE1-206ENST00000447024 IRF7Q92985 503 aa13.37□□□□□ -0.27
SMARCE1-206ENST00000447024 AK7Q96M32 723 aa13.37□□□□□ -0.27
SMARCE1-206ENST00000447024 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-206ENST00000447024 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms