RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
LIN54-203ENST00000446851 A0A1W2PP64 1363 aa13.87□□□□□ -0.19
LIN54-203ENST00000446851 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
LIN54-203ENST00000446851 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
LIN54-203ENST00000446851 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
LIN54-203ENST00000446851 MST1RQ04912 1400 aa13.85□□□□□ -0.19
LIN54-203ENST00000446851 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
LIN54-203ENST00000446851 FYB1O15117 783 aa13.85□□□□□ -0.19
LIN54-203ENST00000446851 FAM9BQ8IZU0 186 aa13.85□□□□□ -0.19
LIN54-203ENST00000446851 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
LIN54-203ENST00000446851 TECPR2O15040 1411 aa13.84□□□□□ -0.19
LIN54-203ENST00000446851 NEFMP07197 916 aa13.83□□□□□ -0.2
LIN54-203ENST00000446851 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
LIN54-203ENST00000446851 TRPM1Q7Z4N2 1603 aa13.83□□□□□ -0.2
LIN54-203ENST00000446851 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
LIN54-203ENST00000446851 SPATA31A3Q5VYP0 1347 aa13.83□□□□□ -0.2
LIN54-203ENST00000446851 USP21Q9UK80 565 aa13.82□□□□□ -0.2
LIN54-203ENST00000446851 KDM5AP29375 1690 aaKnown RBP13.82□□□□□ -0.2
LIN54-203ENST00000446851 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
LIN54-203ENST00000446851 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
LIN54-203ENST00000446851 MTHFSP49914 203 aa13.81□□□□□ -0.2
LIN54-203ENST00000446851 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
LIN54-203ENST00000446851 LTBP4Q8N2S1 1624 aa13.81□□□□□ -0.2
LIN54-203ENST00000446851 JCADQ9P266 1359 aa13.8□□□□□ -0.2
LIN54-203ENST00000446851 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
LIN54-203ENST00000446851 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
LIN54-203ENST00000446851 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
LIN54-203ENST00000446851 LAMC1P11047 1609 aa13.79□□□□□ -0.2
LIN54-203ENST00000446851 HMOX1P09601 288 aa13.79□□□□□ -0.2
LIN54-203ENST00000446851 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
LIN54-203ENST00000446851 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
LIN54-203ENST00000446851 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
LIN54-203ENST00000446851 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
LIN54-203ENST00000446851 QTRT2Q9H974 415 aaKnown RBP13.78□□□□□ -0.2
LIN54-203ENST00000446851 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
LIN54-203ENST00000446851 NCOA3Q9Y6Q9 1424 aa13.78□□□□□ -0.2
LIN54-203ENST00000446851 AFF2P51816 1311 aa13.77□□□□□ -0.2
LIN54-203ENST00000446851 SOS2Q07890 1332 aaPredicted RBP13.77□□□□□ -0.2
LIN54-203ENST00000446851 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.2
LIN54-203ENST00000446851 ARHGEF10O15013 1369 aa13.77□□□□□ -0.2
LIN54-203ENST00000446851 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
LIN54-203ENST00000446851 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.21
LIN54-203ENST00000446851 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
LIN54-203ENST00000446851 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
LIN54-203ENST00000446851 ATP7BP35670 1465 aa13.76□□□□□ -0.21
LIN54-203ENST00000446851 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
LIN54-203ENST00000446851 SBNO2Q9Y2G9 1366 aa13.76□□□□□ -0.21
LIN54-203ENST00000446851 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
LIN54-203ENST00000446851 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
LIN54-203ENST00000446851 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 DCCP43146 1447 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 DLC1Q96QB1 1528 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 USP6P35125 1406 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
LIN54-203ENST00000446851 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
LIN54-203ENST00000446851 MIER1Q8N108 512 aa13.74□□□□□ -0.21
LIN54-203ENST00000446851 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
LIN54-203ENST00000446851 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
LIN54-203ENST00000446851 RAPGEF4Q8WZA2 1011 aa13.74□□□□□ -0.21
LIN54-203ENST00000446851 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
LIN54-203ENST00000446851 PDE3BQ13370 1112 aa13.73□□□□□ -0.21
LIN54-203ENST00000446851 TNS3Q68CZ2 1445 aa13.72□□□□□ -0.21
LIN54-203ENST00000446851 CCDC146Q8IYE0 955 aa13.72□□□□□ -0.21
LIN54-203ENST00000446851 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
LIN54-203ENST00000446851 XRN1Q8IZH2 1706 aaKnown RBP13.71□□□□□ -0.21
LIN54-203ENST00000446851 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.21
LIN54-203ENST00000446851 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
LIN54-203ENST00000446851 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.22
LIN54-203ENST00000446851 ARHGEF28Q8N1W1 1705 aaKnown RBP13.71□□□□□ -0.22
LIN54-203ENST00000446851 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
LIN54-203ENST00000446851 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
LIN54-203ENST00000446851 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
LIN54-203ENST00000446851 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
LIN54-203ENST00000446851 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
LIN54-203ENST00000446851 RXRBP28702 533 aa13.69□□□□□ -0.22
LIN54-203ENST00000446851 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
LIN54-203ENST00000446851 SPATA31A6Q5VVP1 1343 aa13.69□□□□□ -0.22
LIN54-203ENST00000446851 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
LIN54-203ENST00000446851 PPP2R1AP30153 589 aa13.69□□□□□ -0.22
LIN54-203ENST00000446851 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
LIN54-203ENST00000446851 LAS1LQ9Y4W2 734 aaKnown RBP13.69□□□□□ -0.22
LIN54-203ENST00000446851 RRP7AQ9Y3A4 280 aaKnown RBP13.68□□□□□ -0.22
LIN54-203ENST00000446851 MAPK8IP3Q9UPT6 1336 aa13.68□□□□□ -0.22
LIN54-203ENST00000446851 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
LIN54-203ENST00000446851 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
LIN54-203ENST00000446851 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
LIN54-203ENST00000446851 HOXC9P31274 260 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 RALBP1Q15311 655 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 ARXQ96QS3 562 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
LIN54-203ENST00000446851 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
LIN54-203ENST00000446851 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
LIN54-203ENST00000446851 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
LIN54-203ENST00000446851 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
LIN54-203ENST00000446851 AEBP1Q8IUX7 1158 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms