RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 EMID1Q96A84 441 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P48-201ENST00000446155 FKBPLQ9UIM3 349 aa8.9□□□□□ -0.98
HMGB1P48-201ENST00000446155 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
HMGB1P48-201ENST00000446155 UNC93B1Q9H1C4 597 aa8.89□□□□□ -0.99
HMGB1P48-201ENST00000446155 RAD21O60216 631 aa8.88□□□□□ -0.99
HMGB1P48-201ENST00000446155 PROSER2Q86WR7 435 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P48-201ENST00000446155 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
HMGB1P48-201ENST00000446155 PRM3Q9NNZ6 103 aa8.87□□□□□ -0.99
HMGB1P48-201ENST00000446155 ABL2P42684 1182 aa8.86□□□□□ -0.99
HMGB1P48-201ENST00000446155 ARMC2Q8NEN0 867 aa8.86□□□□□ -0.99
HMGB1P48-201ENST00000446155 TRAK2O60296 914 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 RPIAP49247 311 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 PLSCR2Q9NRY7 297 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 PDXDC2PQ6P474 469 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 LIAT1Q6ZQX7 453 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 SH3BP5LQ7L8J4 393 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 TRIM32Q13049 653 aa8.83□□□□□ -1
HMGB1P48-201ENST00000446155 NBPF14Q5TI25 921 aa8.83□□□□□ -1
HMGB1P48-201ENST00000446155 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
HMGB1P48-201ENST00000446155 SH3RF1Q7Z6J0 888 aa8.82□□□□□ -1
HMGB1P48-201ENST00000446155 ZNF511Q8NB15 262 aa8.82□□□□□ -1
HMGB1P48-201ENST00000446155 BAP1Q92560 729 aa8.82□□□□□ -1
HMGB1P48-201ENST00000446155 FBXO45P0C2W1 286 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 SH3BP2P78314 561 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 SKOR1P84550 965 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 LINC01559Q495D7 138 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 ZBBXA8MT70 800 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 WNT7BP56706 349 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 NR1H3Q13133 447 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 WASHC4Q2M389 1173 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 POM121CA8CG34 1229 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 ZBTB24O43167 697 aaPredicted RBP8.79□□□□□ -1
HMGB1P48-201ENST00000446155 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 FOXJ1Q92949 421 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 C1QTNF2Q9BXJ5 285 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 SLC19A1P41440 591 aa8.78□□□□□ -1
HMGB1P48-201ENST00000446155 VAC14Q08AM6 782 aa8.78□□□□□ -1
HMGB1P48-201ENST00000446155 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
HMGB1P48-201ENST00000446155 PTK2Q05397 1052 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 SPRYD7Q5W111 196 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 ADAMTS19Q8TE59 1207 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
HMGB1P48-201ENST00000446155 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 BPHLQ86WA6 291 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 ALG2Q9H553 416 aa8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 ERFEQ4G0M1 354 aa8.74□□□□□ -1.01
HMGB1P48-201ENST00000446155 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
HMGB1P48-201ENST00000446155 SUPT5HO00267 1087 aaKnown RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 SOX11P35716 441 aa8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 ZNF777Q9ULD5 760 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 WNT7AO00755 349 aa8.72□□□□□ -1.01
HMGB1P48-201ENST00000446155 RGS20O76081 388 aa8.72□□□□□ -1.01
HMGB1P48-201ENST00000446155 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
HMGB1P48-201ENST00000446155 ARID3CA6NKF2 412 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 SIAH2O43255 324 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 EIF4G2P78344 907 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 GLMNQ92990 594 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 MPNDQ8N594 471 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 PKD2L1Q9P0L9 805 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 AGERQ15109 404 aa8.69□□□□□ -1.02
HMGB1P48-201ENST00000446155 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
HMGB1P48-201ENST00000446155 GDF9O60383 454 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 MCCD1P59942 119 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 CDK15Q96Q40 435 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 PCDHB9Q9Y5E1 797 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
HMGB1P48-201ENST00000446155 MRGPRX2Q96LB1 330 aa8.67□□□□□ -1.02
HMGB1P48-201ENST00000446155 UCN2Q96RP3 112 aa8.67□□□□□ -1.02
HMGB1P48-201ENST00000446155 ESPNB1AK53 854 aa8.66□□□□□ -1.02
HMGB1P48-201ENST00000446155 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
HMGB1P48-201ENST00000446155 CEP126Q9P2H0 1117 aa8.66□□□□□ -1.02
HMGB1P48-201ENST00000446155 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 DZIP3Q86Y13 1208 aaKnown RBP8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 TLL2Q9Y6L7 1015 aa8.64□□□□□ -1.03
HMGB1P48-201ENST00000446155 GRM5P41594 1212 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20EP86478 221 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20CP86479 221 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20DP86480 221 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20BP86481 221 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms