RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 EMID1Q96A84 441 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P48-201ENST00000446155 FKBPLQ9UIM3 349 aa8.9□□□□□ -0.98
HMGB1P48-201ENST00000446155 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
HMGB1P48-201ENST00000446155 UNC93B1Q9H1C4 597 aa8.89□□□□□ -0.99
HMGB1P48-201ENST00000446155 RAD21O60216 631 aa8.88□□□□□ -0.99
HMGB1P48-201ENST00000446155 PROSER2Q86WR7 435 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P48-201ENST00000446155 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
HMGB1P48-201ENST00000446155 PRM3Q9NNZ6 103 aa8.87□□□□□ -0.99
HMGB1P48-201ENST00000446155 ABL2P42684 1182 aa8.86□□□□□ -0.99
HMGB1P48-201ENST00000446155 ARMC2Q8NEN0 867 aa8.86□□□□□ -0.99
HMGB1P48-201ENST00000446155 TRAK2O60296 914 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 RPIAP49247 311 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 PLSCR2Q9NRY7 297 aa8.85□□□□□ -0.99
HMGB1P48-201ENST00000446155 PDXDC2PQ6P474 469 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 LIAT1Q6ZQX7 453 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 SH3BP5LQ7L8J4 393 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
HMGB1P48-201ENST00000446155 TRIM32Q13049 653 aa8.83□□□□□ -1
HMGB1P48-201ENST00000446155 NBPF14Q5TI25 921 aa8.83□□□□□ -1
HMGB1P48-201ENST00000446155 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
HMGB1P48-201ENST00000446155 SH3RF1Q7Z6J0 888 aa8.82□□□□□ -1
HMGB1P48-201ENST00000446155 ZNF511Q8NB15 262 aa8.82□□□□□ -1
HMGB1P48-201ENST00000446155 BAP1Q92560 729 aa8.82□□□□□ -1
HMGB1P48-201ENST00000446155 FBXO45P0C2W1 286 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 SH3BP2P78314 561 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 SKOR1P84550 965 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 LINC01559Q495D7 138 aa8.81□□□□□ -1
HMGB1P48-201ENST00000446155 ZBBXA8MT70 800 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 WNT7BP56706 349 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 NR1H3Q13133 447 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 WASHC4Q2M389 1173 aa8.8□□□□□ -1
HMGB1P48-201ENST00000446155 POM121CA8CG34 1229 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 ZBTB24O43167 697 aaPredicted RBP8.79□□□□□ -1
HMGB1P48-201ENST00000446155 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 FOXJ1Q92949 421 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 C1QTNF2Q9BXJ5 285 aa8.79□□□□□ -1
HMGB1P48-201ENST00000446155 SLC19A1P41440 591 aa8.78□□□□□ -1
HMGB1P48-201ENST00000446155 VAC14Q08AM6 782 aa8.78□□□□□ -1
HMGB1P48-201ENST00000446155 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
HMGB1P48-201ENST00000446155 PTK2Q05397 1052 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 SPRYD7Q5W111 196 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 ADAMTS19Q8TE59 1207 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P48-201ENST00000446155 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
HMGB1P48-201ENST00000446155 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 BPHLQ86WA6 291 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 ALG2Q9H553 416 aa8.75□□□□□ -1.01
HMGB1P48-201ENST00000446155 ERFEQ4G0M1 354 aa8.74□□□□□ -1.01
HMGB1P48-201ENST00000446155 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
HMGB1P48-201ENST00000446155 SUPT5HO00267 1087 aaKnown RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 SOX11P35716 441 aa8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 ZNF777Q9ULD5 760 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P48-201ENST00000446155 WNT7AO00755 349 aa8.72□□□□□ -1.01
HMGB1P48-201ENST00000446155 RGS20O76081 388 aa8.72□□□□□ -1.01
HMGB1P48-201ENST00000446155 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
HMGB1P48-201ENST00000446155 ARID3CA6NKF2 412 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 SIAH2O43255 324 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 EIF4G2P78344 907 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 GLMNQ92990 594 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
HMGB1P48-201ENST00000446155 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 MPNDQ8N594 471 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 PKD2L1Q9P0L9 805 aa8.7□□□□□ -1.02
HMGB1P48-201ENST00000446155 AGERQ15109 404 aa8.69□□□□□ -1.02
HMGB1P48-201ENST00000446155 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
HMGB1P48-201ENST00000446155 GDF9O60383 454 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 MCCD1P59942 119 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 CDK15Q96Q40 435 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 PCDHB9Q9Y5E1 797 aa8.68□□□□□ -1.02
HMGB1P48-201ENST00000446155 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
HMGB1P48-201ENST00000446155 MRGPRX2Q96LB1 330 aa8.67□□□□□ -1.02
HMGB1P48-201ENST00000446155 UCN2Q96RP3 112 aa8.67□□□□□ -1.02
HMGB1P48-201ENST00000446155 ESPNB1AK53 854 aa8.66□□□□□ -1.02
HMGB1P48-201ENST00000446155 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
HMGB1P48-201ENST00000446155 CEP126Q9P2H0 1117 aa8.66□□□□□ -1.02
HMGB1P48-201ENST00000446155 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 DZIP3Q86Y13 1208 aaKnown RBP8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 CDV3Q9UKY7 258 aaKnown RBP8.65□□□□□ -1.02
HMGB1P48-201ENST00000446155 TLL2Q9Y6L7 1015 aa8.64□□□□□ -1.03
HMGB1P48-201ENST00000446155 GRM5P41594 1212 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20EP86478 221 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20CP86479 221 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20DP86480 221 aa8.63□□□□□ -1.03
HMGB1P48-201ENST00000446155 PRR20BP86481 221 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms