RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 PRR36Q9H6K5 1346 aa35.04■■■■□ 3.2
NUP50-211ENST00000445721 ADGRB2O60241 1585 aa35.02■■■■□ 3.2
NUP50-211ENST00000445721 PAK3O75914 559 aaPredicted RBP35.02■■■■□ 3.2
NUP50-211ENST00000445721 R3HDM1Q15032 1099 aaKnown RBP35.02■■■■□ 3.2
NUP50-211ENST00000445721 NGDNQ8NEJ9 315 aaKnown RBP35.01■■■■□ 3.2
NUP50-211ENST00000445721 EIF3AQ14152 1382 aaKnown RBP35■■■■□ 3.19
NUP50-211ENST00000445721 PRDM11Q9NQV5 511 aa35■■■■□ 3.19
NUP50-211ENST00000445721 ALS2Q96Q42 1657 aa35■■■■□ 3.19
NUP50-211ENST00000445721 WASLO00401 505 aaPredicted RBP34.98■■■■□ 3.19
NUP50-211ENST00000445721 RGPD1P0DJD0 1748 aa34.98■■■■□ 3.19
NUP50-211ENST00000445721 ADGRB1O14514 1584 aa34.96■■■■□ 3.19
NUP50-211ENST00000445721 EZH2Q15910 746 aaKnown RBP34.94■■■■□ 3.18
NUP50-211ENST00000445721 TULP4Q9NRJ4 1543 aa34.94■■■■□ 3.18
NUP50-211ENST00000445721 KDM2AQ9Y2K7 1162 aa34.93■■■■□ 3.18
NUP50-211ENST00000445721 DISP2A7MBM2 1401 aa34.91■■■■□ 3.18
NUP50-211ENST00000445721 THSD7AQ9UPZ6 1657 aa34.91■■■■□ 3.18
NUP50-211ENST00000445721 SPATA31A1Q5TZJ5 1347 aa34.9■■■■□ 3.18
NUP50-211ENST00000445721 TRIM37O94972 964 aa34.9■■■■□ 3.18
NUP50-211ENST00000445721 CHRNA2Q15822 529 aa34.9■■■■□ 3.18
NUP50-211ENST00000445721 STRN4Q9NRL3 753 aa34.89■■■■□ 3.18
NUP50-211ENST00000445721 KIAA0232Q92628 1395 aa34.88■■■■□ 3.17
NUP50-211ENST00000445721 FAM196AQ6ZSG2 479 aa34.87■■■■□ 3.17
NUP50-211ENST00000445721 CAMKK2Q96RR4 588 aa34.87■■■■□ 3.17
NUP50-211ENST00000445721 CRYBG1Q9Y4K1 1723 aa34.86■■■■□ 3.17
NUP50-211ENST00000445721 DCAF11Q8TEB1 546 aa34.86■■■■□ 3.17
NUP50-211ENST00000445721 TNS1Q9HBL0 1735 aaKnown RBP34.85■■■■□ 3.17
NUP50-211ENST00000445721 ZC3H6P61129 1189 aaKnown RBP34.84■■■■□ 3.17
NUP50-211ENST00000445721 APBA3O96018 575 aa34.83■■■■□ 3.17
NUP50-211ENST00000445721 NUDT16Q96DE0 195 aaKnown RBP34.83■■■■□ 3.17
NUP50-211ENST00000445721 NUTM2GQ5VZR2 741 aa34.82■■■■□ 3.16
NUP50-211ENST00000445721 USP35Q9P2H5 1018 aa34.82■■■■□ 3.16
NUP50-211ENST00000445721 EVA1CP58658 441 aa34.78■■■■□ 3.16
NUP50-211ENST00000445721 RAB3GAP2Q9H2M9 1393 aa34.76■■■■□ 3.16
NUP50-211ENST00000445721 PDE3BQ13370 1112 aa34.76■■■■□ 3.16
NUP50-211ENST00000445721 ATP7BP35670 1465 aa34.75■■■■□ 3.15
NUP50-211ENST00000445721 PARD3Q8TEW0 1356 aa34.74■■■■□ 3.15
NUP50-211ENST00000445721 STAC3Q96MF2 364 aa34.74■■■■□ 3.15
NUP50-211ENST00000445721 CDK19Q9BWU1 502 aa34.73■■■■□ 3.15
NUP50-211ENST00000445721 BARGINQ6ZT62 677 aa34.72■■■■□ 3.15
NUP50-211ENST00000445721 ITSN1Q15811 1721 aa34.72■■■■□ 3.15
NUP50-211ENST00000445721 PHRF1Q9P1Y6 1649 aaKnown RBP34.71■■■■□ 3.15
NUP50-211ENST00000445721 ACEP12821 1306 aa34.7■■■■□ 3.15
NUP50-211ENST00000445721 SSH2Q76I76 1423 aa34.7■■■■□ 3.15
NUP50-211ENST00000445721 NBPF8Q3BBV2 869 aa34.69■■■■□ 3.14
NUP50-211ENST00000445721 LARP1Q6PKG0 1096 aaKnown RBP34.69■■■■□ 3.14
NUP50-211ENST00000445721 NBPF14Q5TI25 921 aa34.67■■■■□ 3.14
NUP50-211ENST00000445721 TCP11L2Q8N4U5 519 aa34.66■■■■□ 3.14
NUP50-211ENST00000445721 ABTB2Q8N961 1025 aa34.66■■■■□ 3.14
NUP50-211ENST00000445721 CCDC61Q9Y6R9 512 aa34.66■■■■□ 3.14
NUP50-211ENST00000445721 ARHGEF28Q8N1W1 1705 aaKnown RBP34.66■■■■□ 3.14
NUP50-211ENST00000445721 POLR3AO14802 1390 aaPredicted RBP34.65■■■■□ 3.14
NUP50-211ENST00000445721 CAMTA1Q9Y6Y1 1673 aa34.63■■■■□ 3.13
NUP50-211ENST00000445721 PLEKHG3A1L390 1219 aa34.61■■■■□ 3.13
NUP50-211ENST00000445721 RREB1Q92766 1687 aa34.59■■■■□ 3.13
NUP50-211ENST00000445721 CPDO75976 1380 aa34.59■■■■□ 3.13
NUP50-211ENST00000445721 YY1P25490 414 aa34.58■■■■□ 3.13
NUP50-211ENST00000445721 THRAP3Q9Y2W1 955 aaKnown RBP34.57■■■■□ 3.12
NUP50-211ENST00000445721 NRKQ7Z2Y5 1582 aa34.57■■■■□ 3.12
NUP50-211ENST00000445721 USP19O94966 1318 aa34.56■■■■□ 3.12
NUP50-211ENST00000445721 NUP188Q5SRE5 1749 aa34.56■■■■□ 3.12
NUP50-211ENST00000445721 NLRP13Q86W25 1043 aa34.55■■■■□ 3.12
NUP50-211ENST00000445721 PPP1R1BQ9UD71 204 aaPredicted RBP34.55■■■■□ 3.12
NUP50-211ENST00000445721 GCP02774 474 aa34.54■■■■□ 3.12
NUP50-211ENST00000445721 SPON1Q9HCB6 807 aa34.54■■■■□ 3.12
NUP50-211ENST00000445721 TOPAZ1Q8N9V7 1692 aa34.54■■■■□ 3.12
NUP50-211ENST00000445721 LMO7Q8WWI1 1683 aa34.52■■■■□ 3.12
NUP50-211ENST00000445721 KCNQ2O43526 872 aa34.5■■■■□ 3.11
NUP50-211ENST00000445721 ZBTB7CA1YPR0 619 aa34.49■■■■□ 3.11
NUP50-211ENST00000445721 C11orf95C9JLR9 678 aaPredicted RBP34.48■■■■□ 3.11
NUP50-211ENST00000445721 SRPK2P78362 688 aaKnown RBP34.48■■■■□ 3.11
NUP50-211ENST00000445721 COL5A2P05997 1499 aaPredicted RBP34.46■■■■□ 3.11
NUP50-211ENST00000445721 DCAF8L1A6NGE4 600 aa34.45■■■■□ 3.11
NUP50-211ENST00000445721 PPIP5K1Q6PFW1 1433 aa34.45■■■■□ 3.11
NUP50-211ENST00000445721 NBPF1Q3BBV0 1214 aa34.44■■■■□ 3.1
NUP50-211ENST00000445721 CABP2Q9NPB3 220 aa34.43■■■■□ 3.1
NUP50-211ENST00000445721 CRB1P82279 1406 aa34.43■■■■□ 3.1
NUP50-211ENST00000445721 PARP4Q9UKK3 1724 aaKnown RBP34.43■■■■□ 3.1
NUP50-211ENST00000445721 OVOS2A0A0G2JMS6 1433 aa34.41■■■■□ 3.1
NUP50-211ENST00000445721 OVOS2A0A0J9YW53 1432 aa34.41■■■■□ 3.1
NUP50-211ENST00000445721 OVOS2Q6IE36 1432 aa34.41■■■■□ 3.1
NUP50-211ENST00000445721 NINLQ9Y2I6 1382 aa34.39■■■■□ 3.1
NUP50-211ENST00000445721 NLRP6P59044 892 aa34.39■■■■□ 3.1
NUP50-211ENST00000445721 DDB1Q16531 1140 aa34.39■■■■□ 3.1
NUP50-211ENST00000445721 PLSCR1O15162 318 aa34.38■■■■□ 3.09
NUP50-211ENST00000445721 TOM1L2Q6ZVM7 507 aa34.37■■■■□ 3.09
NUP50-211ENST00000445721 BRD4O60885 1362 aaPredicted RBP34.36■■■■□ 3.09
NUP50-211ENST00000445721 AATKQ6ZMQ8 1374 aa34.36■■■■□ 3.09
NUP50-211ENST00000445721 CENPJQ9HC77 1338 aaPredicted RBP34.36■■■■□ 3.09
NUP50-211ENST00000445721 KIAA1210Q9ULL0 1709 aa34.35■■■■□ 3.09
NUP50-211ENST00000445721 ANO8Q9HCE9 1232 aaPredicted RBP34.35■■■■□ 3.09
NUP50-211ENST00000445721 CABP1Q9NZU7 370 aa34.35■■■■□ 3.09
NUP50-211ENST00000445721 PTF1AQ7RTS3 328 aa34.34■■■■□ 3.09
NUP50-211ENST00000445721 BCL11BQ9C0K0 894 aaPredicted RBP34.34■■■■□ 3.09
NUP50-211ENST00000445721 PEAK1Q9H792 1746 aa34.34■■■■□ 3.09
NUP50-211ENST00000445721 USP6P35125 1406 aa34.3■■■■□ 3.08
NUP50-211ENST00000445721 SBF2Q86WG5 1849 aa34.3■■■■□ 3.08
NUP50-211ENST00000445721 LRRC37A3O60309 1634 aa34.29■■■■□ 3.08
NUP50-211ENST00000445721 MARCH10Q8NA82 808 aaPredicted RBP34.28■■■■□ 3.08
NUP50-211ENST00000445721 PDGFDQ9GZP0 370 aaPredicted RBP34.28■■■■□ 3.08
NUP50-211ENST00000445721 AXIN2Q9Y2T1 843 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms