RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 PAK3O75914 559 aaPredicted RBP26.73■■□□□ 1.87
LRRC42-204ENST00000444987 PUS7Q96PZ0 661 aaKnown RBP26.73■■□□□ 1.87
LRRC42-204ENST00000444987 CABP1Q9NZU7 370 aa26.72■■□□□ 1.87
LRRC42-204ENST00000444987 CRYBG1Q9Y4K1 1723 aa26.72■■□□□ 1.87
LRRC42-204ENST00000444987 CDK12Q9NYV4 1490 aaPredicted RBP26.71■■□□□ 1.87
LRRC42-204ENST00000444987 RXRBP28702 533 aa26.71■■□□□ 1.87
LRRC42-204ENST00000444987 USP21Q9UK80 565 aa26.71■■□□□ 1.87
LRRC42-204ENST00000444987 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.7■■□□□ 1.87
LRRC42-204ENST00000444987 QTRT2Q9H974 415 aaKnown RBP26.7■■□□□ 1.86
LRRC42-204ENST00000444987 CABLES1Q8TDN4 633 aa26.69■■□□□ 1.86
LRRC42-204ENST00000444987 ZNF692Q9BU19 519 aaPredicted RBP26.69■■□□□ 1.86
LRRC42-204ENST00000444987 USP6P35125 1406 aa26.68■■□□□ 1.86
LRRC42-204ENST00000444987 TRPC5Q9UL62 973 aaPredicted RBP26.68■■□□□ 1.86
LRRC42-204ENST00000444987 SLIT2O94813 1529 aa26.68■■□□□ 1.86
LRRC42-204ENST00000444987 NWD2Q9ULI1 1742 aa26.68■■□□□ 1.86
LRRC42-204ENST00000444987 AKAP12Q02952 1782 aa26.67■■□□□ 1.86
LRRC42-204ENST00000444987 ST20-MTHFSA0A0A6YYL1 179 aa26.67■■□□□ 1.86
LRRC42-204ENST00000444987 RBM6P78332 1123 aaKnown RBP26.67■■□□□ 1.86
LRRC42-204ENST00000444987 BCL9LQ86UU0 1499 aa26.67■■□□□ 1.86
LRRC42-204ENST00000444987 TESK2Q96S53 571 aa26.66■■□□□ 1.86
LRRC42-204ENST00000444987 USP47Q96K76 1375 aa26.65■■□□□ 1.86
LRRC42-204ENST00000444987 ATRNO75882 1429 aa26.65■■□□□ 1.86
LRRC42-204ENST00000444987 PHRF1Q9P1Y6 1649 aaKnown RBP26.64■■□□□ 1.85
LRRC42-204ENST00000444987 CPSF1Q10570 1443 aaKnown RBP26.64■■□□□ 1.85
LRRC42-204ENST00000444987 PLCH1Q4KWH8 1693 aa26.63■■□□□ 1.85
LRRC42-204ENST00000444987 ABTB2Q8N961 1025 aa26.63■■□□□ 1.85
LRRC42-204ENST00000444987 SSH2Q76I76 1423 aa26.63■■□□□ 1.85
LRRC42-204ENST00000444987 COL14A1Q05707 1796 aaKnown RBP26.62■■□□□ 1.85
LRRC42-204ENST00000444987 UNC5CLQ8IV45 518 aa26.62■■□□□ 1.85
LRRC42-204ENST00000444987 NLRP13Q86W25 1043 aa26.61■■□□□ 1.85
LRRC42-204ENST00000444987 NINLQ9Y2I6 1382 aa26.6■■□□□ 1.85
LRRC42-204ENST00000444987 USP19O94966 1318 aa26.59■■□□□ 1.85
LRRC42-204ENST00000444987 MON2Q7Z3U7 1717 aa26.59■■□□□ 1.85
LRRC42-204ENST00000444987 FAM83GA6ND36 823 aa26.58■■□□□ 1.85
LRRC42-204ENST00000444987 TTC21AQ8NDW8 1320 aa26.58■■□□□ 1.85
LRRC42-204ENST00000444987 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
LRRC42-204ENST00000444987 PLEKHG5O94827 1062 aa26.57■■□□□ 1.84
LRRC42-204ENST00000444987 KTN1Q86UP2 1357 aaKnown RBP26.57■■□□□ 1.84
LRRC42-204ENST00000444987 TMF1P82094 1093 aa26.56■■□□□ 1.84
LRRC42-204ENST00000444987 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
LRRC42-204ENST00000444987 CDCA8Q53HL2 280 aa26.54■■□□□ 1.84
LRRC42-204ENST00000444987 HDGFL2Q7Z4V5 671 aaPredicted RBP26.54■■□□□ 1.84
LRRC42-204ENST00000444987 GJD4Q96KN9 370 aaPredicted RBP26.54■■□□□ 1.84
LRRC42-204ENST00000444987 TTC21BQ7Z4L5 1316 aa26.54■■□□□ 1.84
LRRC42-204ENST00000444987 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
LRRC42-204ENST00000444987 VPS72Q15906 364 aa26.53■■□□□ 1.84
LRRC42-204ENST00000444987 NUTM2GQ5VZR2 741 aa26.53■■□□□ 1.84
LRRC42-204ENST00000444987 TERF2IPQ9NYB0 399 aa26.53■■□□□ 1.84
LRRC42-204ENST00000444987 CD163L1Q9NR16 1453 aa26.53■■□□□ 1.84
LRRC42-204ENST00000444987 RGS12O14924 1447 aa26.52■■□□□ 1.84
LRRC42-204ENST00000444987 SLIT3O75094 1523 aa26.52■■□□□ 1.84
LRRC42-204ENST00000444987 CPDO75976 1380 aa26.52■■□□□ 1.84
LRRC42-204ENST00000444987 TMC1Q8TDI8 760 aa26.52■■□□□ 1.84
LRRC42-204ENST00000444987 PRDM11Q9NQV5 511 aa26.52■■□□□ 1.84
LRRC42-204ENST00000444987 KIAA0232Q92628 1395 aa26.51■■□□□ 1.83
LRRC42-204ENST00000444987 NLRP6P59044 892 aa26.51■■□□□ 1.83
LRRC42-204ENST00000444987 GCP02774 474 aa26.5■■□□□ 1.83
LRRC42-204ENST00000444987 SLC12A5Q9H2X9 1139 aa26.49■■□□□ 1.83
LRRC42-204ENST00000444987 BTG4Q9NY30 223 aa26.49■■□□□ 1.83
LRRC42-204ENST00000444987 EDC4Q6P2E9 1401 aaKnown RBP26.48■■□□□ 1.83
LRRC42-204ENST00000444987 USP54Q70EL1 1684 aa26.48■■□□□ 1.83
LRRC42-204ENST00000444987 GLI3P10071 1580 aa26.48■■□□□ 1.83
LRRC42-204ENST00000444987 ZC3H6P61129 1189 aaKnown RBP26.47■■□□□ 1.83
LRRC42-204ENST00000444987 A0A1W2PP64 1363 aa26.46■■□□□ 1.83
LRRC42-204ENST00000444987 KCNH5Q8NCM2 988 aa26.45■■□□□ 1.82
LRRC42-204ENST00000444987 USP31Q70CQ4 1352 aa26.45■■□□□ 1.82
LRRC42-204ENST00000444987 EIF4G2P78344 907 aaKnown RBP eCLIP26.44■■□□□ 1.82
LRRC42-204ENST00000444987 LMO7Q8WWI1 1683 aa26.44■■□□□ 1.82
LRRC42-204ENST00000444987 ANKRD36BQ8N2N9 1353 aa26.43■■□□□ 1.82
LRRC42-204ENST00000444987 ONECUT3O60422 494 aaPredicted RBP26.41■■□□□ 1.82
LRRC42-204ENST00000444987 CHRNA2Q15822 529 aa26.4■■□□□ 1.82
LRRC42-204ENST00000444987 CCDC9Q9Y3X0 531 aaKnown RBP26.4■■□□□ 1.82
LRRC42-204ENST00000444987 AATKQ6ZMQ8 1374 aa26.39■■□□□ 1.82
LRRC42-204ENST00000444987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.38■■□□□ 1.81
LRRC42-204ENST00000444987 SPATA31A5Q5VU36 1347 aa26.38■■□□□ 1.81
LRRC42-204ENST00000444987 SPATA31A7Q8IWB4 1347 aa26.38■■□□□ 1.81
LRRC42-204ENST00000444987 CAMTA1Q9Y6Y1 1673 aa26.38■■□□□ 1.81
LRRC42-204ENST00000444987 ABCC6O95255 1503 aa26.36■■□□□ 1.81
LRRC42-204ENST00000444987 NFAT5O94916 1531 aa26.35■■□□□ 1.81
LRRC42-204ENST00000444987 MYOM1P52179 1685 aa26.34■■□□□ 1.81
LRRC42-204ENST00000444987 COL18A1P39060 1754 aa26.34■■□□□ 1.81
LRRC42-204ENST00000444987 HSPA5P11021 654 aaKnown RBP26.34■■□□□ 1.81
LRRC42-204ENST00000444987 EVA1CP58658 441 aa26.34■■□□□ 1.81
LRRC42-204ENST00000444987 ARHGEF25Q86VW2 580 aa26.34■■□□□ 1.81
LRRC42-204ENST00000444987 NME9Q86XW9 330 aa26.34■■□□□ 1.81
LRRC42-204ENST00000444987 UPF1Q92900 1129 aaKnown RBP eCLIP26.33■■□□□ 1.81
LRRC42-204ENST00000444987 OVOS2A0A0J9YW53 1432 aa26.32■■□□□ 1.8
LRRC42-204ENST00000444987 OVOS2Q6IE36 1432 aa26.32■■□□□ 1.8
LRRC42-204ENST00000444987 COL5A2P05997 1499 aaPredicted RBP26.32■■□□□ 1.8
LRRC42-204ENST00000444987 SPATA31A1Q5TZJ5 1347 aa26.32■■□□□ 1.8
LRRC42-204ENST00000444987 SEPT12Q8IYM1 358 aa26.31■■□□□ 1.8
LRRC42-204ENST00000444987 STRN4Q9NRL3 753 aa26.31■■□□□ 1.8
LRRC42-204ENST00000444987 BRWD3Q6RI45 1802 aa26.3■■□□□ 1.8
LRRC42-204ENST00000444987 THSD7AQ9UPZ6 1657 aa26.28■■□□□ 1.8
LRRC42-204ENST00000444987 ZRANB1Q9UGI0 708 aa26.28■■□□□ 1.8
LRRC42-204ENST00000444987 THRAP3Q9Y2W1 955 aaKnown RBP26.28■■□□□ 1.8
LRRC42-204ENST00000444987 FAM98CQ17RN3 349 aaKnown RBP26.27■■□□□ 1.8
LRRC42-204ENST00000444987 CRB1P82279 1406 aa26.26■■□□□ 1.79
LRRC42-204ENST00000444987 BARGINQ6ZT62 677 aa26.26■■□□□ 1.79
LRRC42-204ENST00000444987 COG3Q96JB2 828 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms