RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 SPATA31A5Q5VU36 1347 aa28.34■■■□□ 2.13
SMIM1-201ENST00000444870 SPATA31A7Q8IWB4 1347 aa28.34■■■□□ 2.13
SMIM1-201ENST00000444870 DCAF11Q8TEB1 546 aa28.33■■■□□ 2.13
SMIM1-201ENST00000444870 R3HDM1Q15032 1099 aaKnown RBP28.31■■■□□ 2.12
SMIM1-201ENST00000444870 EIF3AQ14152 1382 aaKnown RBP28.31■■■□□ 2.12
SMIM1-201ENST00000444870 NRAPQ86VF7 1730 aa28.29■■■□□ 2.12
SMIM1-201ENST00000444870 ADGRB1O14514 1584 aa28.29■■■□□ 2.12
SMIM1-201ENST00000444870 CHRNA2Q15822 529 aa28.29■■■□□ 2.12
SMIM1-201ENST00000444870 ADGRB2O60241 1585 aa28.28■■■□□ 2.12
SMIM1-201ENST00000444870 STRN4Q9NRL3 753 aa28.28■■■□□ 2.12
SMIM1-201ENST00000444870 TRPM3Q9HCF6 1732 aaPredicted RBP28.28■■■□□ 2.12
SMIM1-201ENST00000444870 COL14A1Q05707 1796 aaKnown RBP28.27■■■□□ 2.12
SMIM1-201ENST00000444870 NUTM2GQ5VZR2 741 aa28.27■■■□□ 2.12
SMIM1-201ENST00000444870 RAB3GAP2Q9H2M9 1393 aa28.26■■■□□ 2.12
SMIM1-201ENST00000444870 TULP4Q9NRJ4 1543 aa28.26■■■□□ 2.11
SMIM1-201ENST00000444870 ZC3H6P61129 1189 aaKnown RBP28.25■■■□□ 2.11
SMIM1-201ENST00000444870 EZH2Q15910 746 aaKnown RBP28.25■■■□□ 2.11
SMIM1-201ENST00000444870 LRP5O75197 1615 aa28.25■■■□□ 2.11
SMIM1-201ENST00000444870 ALS2Q96Q42 1657 aa28.24■■■□□ 2.11
SMIM1-201ENST00000444870 NUDT16Q96DE0 195 aaKnown RBP28.24■■■□□ 2.11
SMIM1-201ENST00000444870 USP35Q9P2H5 1018 aa28.24■■■□□ 2.11
SMIM1-201ENST00000444870 KIAA0232Q92628 1395 aa28.24■■■□□ 2.11
SMIM1-201ENST00000444870 TRIM37O94972 964 aa28.23■■■□□ 2.11
SMIM1-201ENST00000444870 SPATA31A1Q5TZJ5 1347 aa28.21■■■□□ 2.11
SMIM1-201ENST00000444870 EVA1CP58658 441 aa28.19■■■□□ 2.1
SMIM1-201ENST00000444870 FAM196AQ6ZSG2 479 aa28.18■■■□□ 2.1
SMIM1-201ENST00000444870 APBA3O96018 575 aa28.17■■■□□ 2.1
SMIM1-201ENST00000444870 CDK19Q9BWU1 502 aa28.17■■■□□ 2.1
SMIM1-201ENST00000444870 RGPD1P0DJD0 1748 aa28.16■■■□□ 2.1
SMIM1-201ENST00000444870 CAMKK2Q96RR4 588 aa28.16■■■□□ 2.1
SMIM1-201ENST00000444870 THSD7AQ9UPZ6 1657 aa28.14■■■□□ 2.1
SMIM1-201ENST00000444870 PDE3BQ13370 1112 aa28.14■■■□□ 2.1
SMIM1-201ENST00000444870 DISP2A7MBM2 1401 aa28.13■■■□□ 2.09
SMIM1-201ENST00000444870 ATP7BP35670 1465 aa28.13■■■□□ 2.09
SMIM1-201ENST00000444870 NBPF8Q3BBV2 869 aa28.12■■■□□ 2.09
SMIM1-201ENST00000444870 STAC3Q96MF2 364 aa28.12■■■□□ 2.09
SMIM1-201ENST00000444870 ACEP12821 1306 aa28.12■■■□□ 2.09
SMIM1-201ENST00000444870 CRYBG1Q9Y4K1 1723 aa28.1■■■□□ 2.09
SMIM1-201ENST00000444870 ABTB2Q8N961 1025 aa28.1■■■□□ 2.09
SMIM1-201ENST00000444870 LARP1Q6PKG0 1096 aaKnown RBP28.09■■■□□ 2.09
SMIM1-201ENST00000444870 CCDC61Q9Y6R9 512 aa28.09■■■□□ 2.09
SMIM1-201ENST00000444870 TNS1Q9HBL0 1735 aaKnown RBP28.06■■■□□ 2.08
SMIM1-201ENST00000444870 BARGINQ6ZT62 677 aa28.06■■■□□ 2.08
SMIM1-201ENST00000444870 SSH2Q76I76 1423 aa28.06■■■□□ 2.08
SMIM1-201ENST00000444870 TCP11L2Q8N4U5 519 aa28.05■■■□□ 2.08
SMIM1-201ENST00000444870 ZBTB7CA1YPR0 619 aa28.04■■■□□ 2.08
SMIM1-201ENST00000444870 POLR3AO14802 1390 aaPredicted RBP28.03■■■□□ 2.08
SMIM1-201ENST00000444870 ITSN1Q15811 1721 aa28.02■■■□□ 2.08
SMIM1-201ENST00000444870 ARHGEF28Q8N1W1 1705 aaKnown RBP28.02■■■□□ 2.08
SMIM1-201ENST00000444870 PLEKHG3A1L390 1219 aa28.02■■■□□ 2.08
SMIM1-201ENST00000444870 NBPF14Q5TI25 921 aa28.02■■■□□ 2.08
SMIM1-201ENST00000444870 PHRF1Q9P1Y6 1649 aaKnown RBP28.02■■■□□ 2.08
SMIM1-201ENST00000444870 PARD3Q8TEW0 1356 aa28■■■□□ 2.07
SMIM1-201ENST00000444870 SRPK2P78362 688 aaKnown RBP28■■■□□ 2.07
SMIM1-201ENST00000444870 CAMTA1Q9Y6Y1 1673 aa28■■■□□ 2.07
SMIM1-201ENST00000444870 NLRP13Q86W25 1043 aa27.99■■■□□ 2.07
SMIM1-201ENST00000444870 GCP02774 474 aa27.98■■■□□ 2.07
SMIM1-201ENST00000444870 NBPF1Q3BBV0 1214 aa27.98■■■□□ 2.07
SMIM1-201ENST00000444870 CABP2Q9NPB3 220 aa27.96■■■□□ 2.07
SMIM1-201ENST00000444870 USP19O94966 1318 aa27.95■■■□□ 2.07
SMIM1-201ENST00000444870 CPDO75976 1380 aa27.95■■■□□ 2.06
SMIM1-201ENST00000444870 THRAP3Q9Y2W1 955 aaKnown RBP27.94■■■□□ 2.06
SMIM1-201ENST00000444870 NRKQ7Z2Y5 1582 aa27.94■■■□□ 2.06
SMIM1-201ENST00000444870 PPP1R1BQ9UD71 204 aaPredicted RBP27.93■■■□□ 2.06
SMIM1-201ENST00000444870 PPIP5K1Q6PFW1 1433 aa27.92■■■□□ 2.06
SMIM1-201ENST00000444870 NLRP6P59044 892 aa27.9■■■□□ 2.06
SMIM1-201ENST00000444870 TOPAZ1Q8N9V7 1692 aa27.89■■■□□ 2.06
SMIM1-201ENST00000444870 YY1P25490 414 aa27.89■■■□□ 2.06
SMIM1-201ENST00000444870 SPON1Q9HCB6 807 aa27.89■■■□□ 2.06
SMIM1-201ENST00000444870 CABP1Q9NZU7 370 aa27.88■■■□□ 2.05
SMIM1-201ENST00000444870 CENPJQ9HC77 1338 aaPredicted RBP27.88■■■□□ 2.05
SMIM1-201ENST00000444870 COL5A2P05997 1499 aaPredicted RBP27.87■■■□□ 2.05
SMIM1-201ENST00000444870 KCNQ2O43526 872 aa27.86■■■□□ 2.05
SMIM1-201ENST00000444870 TOM1L2Q6ZVM7 507 aa27.86■■■□□ 2.05
SMIM1-201ENST00000444870 LMO7Q8WWI1 1683 aa27.86■■■□□ 2.05
SMIM1-201ENST00000444870 CRB1P82279 1406 aa27.85■■■□□ 2.05
SMIM1-201ENST00000444870 DDB1Q16531 1140 aa27.84■■■□□ 2.05
SMIM1-201ENST00000444870 RREB1Q92766 1687 aa27.84■■■□□ 2.05
SMIM1-201ENST00000444870 NUP188Q5SRE5 1749 aa27.84■■■□□ 2.05
SMIM1-201ENST00000444870 C11orf95C9JLR9 678 aaPredicted RBP27.82■■■□□ 2.04
SMIM1-201ENST00000444870 DCAF8L1A6NGE4 600 aa27.81■■■□□ 2.04
SMIM1-201ENST00000444870 PTF1AQ7RTS3 328 aa27.81■■■□□ 2.04
SMIM1-201ENST00000444870 OVOS2A0A0G2JMS6 1433 aa27.81■■■□□ 2.04
SMIM1-201ENST00000444870 OVOS2A0A0J9YW53 1432 aa27.81■■■□□ 2.04
SMIM1-201ENST00000444870 OVOS2Q6IE36 1432 aa27.81■■■□□ 2.04
SMIM1-201ENST00000444870 AATKQ6ZMQ8 1374 aa27.79■■■□□ 2.04
SMIM1-201ENST00000444870 SOX12O15370 315 aa27.79■■■□□ 2.04
SMIM1-201ENST00000444870 USP6P35125 1406 aa27.78■■■□□ 2.04
SMIM1-201ENST00000444870 AXIN2Q9Y2T1 843 aa27.78■■■□□ 2.04
SMIM1-201ENST00000444870 BRD4O60885 1362 aaPredicted RBP27.77■■■□□ 2.04
SMIM1-201ENST00000444870 PLSCR1O15162 318 aa27.77■■■□□ 2.04
SMIM1-201ENST00000444870 BCL11BQ9C0K0 894 aaPredicted RBP27.77■■■□□ 2.04
SMIM1-201ENST00000444870 ANO8Q9HCE9 1232 aaPredicted RBP27.77■■■□□ 2.04
SMIM1-201ENST00000444870 KIAA1210Q9ULL0 1709 aa27.76■■■□□ 2.03
SMIM1-201ENST00000444870 PARP4Q9UKK3 1724 aaKnown RBP27.75■■■□□ 2.03
SMIM1-201ENST00000444870 CSB-PGBD3P0DP91 1061 aa27.75■■■□□ 2.03
SMIM1-201ENST00000444870 MARCH10Q8NA82 808 aaPredicted RBP27.74■■■□□ 2.03
SMIM1-201ENST00000444870 PDGFDQ9GZP0 370 aaPredicted RBP27.74■■■□□ 2.03
SMIM1-201ENST00000444870 WDR17Q8IZU2 1322 aa27.72■■■□□ 2.03
SMIM1-201ENST00000444870 ZBTB7AO95365 584 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms