RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 NRKQ7Z2Y5 1582 aa20.61■□□□□ 0.89
SNX13-204ENST00000444712 E9PSI1 815 aa20.6■□□□□ 0.89
SNX13-204ENST00000444712 SLFN5Q08AF3 891 aa20.6■□□□□ 0.89
SNX13-204ENST00000444712 DUSP27Q5VZP5 1158 aa20.6■□□□□ 0.89
SNX13-204ENST00000444712 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
SNX13-204ENST00000444712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNX13-204ENST00000444712 CHD2O14647 1828 aaKnown RBP20.58■□□□□ 0.89
SNX13-204ENST00000444712 TRMT2AQ8IZ69 625 aaKnown RBP20.58■□□□□ 0.88
SNX13-204ENST00000444712 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.88
SNX13-204ENST00000444712 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
SNX13-204ENST00000444712 PRR36Q9H6K5 1346 aa20.57■□□□□ 0.88
SNX13-204ENST00000444712 AATKQ6ZMQ8 1374 aa20.57■□□□□ 0.88
SNX13-204ENST00000444712 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
SNX13-204ENST00000444712 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
SNX13-204ENST00000444712 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
SNX13-204ENST00000444712 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNX13-204ENST00000444712 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
SNX13-204ENST00000444712 DIAPH1O60610 1272 aaKnown RBP20.54■□□□□ 0.88
SNX13-204ENST00000444712 TCP11L2Q8N4U5 519 aa20.54■□□□□ 0.88
SNX13-204ENST00000444712 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
SNX13-204ENST00000444712 COG3Q96JB2 828 aa20.54■□□□□ 0.88
SNX13-204ENST00000444712 ANKARQ7Z5J8 1434 aa20.53■□□□□ 0.88
SNX13-204ENST00000444712 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
SNX13-204ENST00000444712 WWC1Q8IX03 1113 aa20.53■□□□□ 0.88
SNX13-204ENST00000444712 WDR63Q8IWG1 891 aa20.53■□□□□ 0.88
SNX13-204ENST00000444712 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.52■□□□□ 0.88
SNX13-204ENST00000444712 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
SNX13-204ENST00000444712 NALCNQ8IZF0 1738 aa20.52■□□□□ 0.88
SNX13-204ENST00000444712 USP6P35125 1406 aa20.51■□□□□ 0.87
SNX13-204ENST00000444712 U2SURPO15042 1029 aaKnown RBP20.51■□□□□ 0.87
SNX13-204ENST00000444712 RGPD8O14715 1765 aaPredicted RBP20.51■□□□□ 0.87
SNX13-204ENST00000444712 ACEP12821 1306 aa20.5■□□□□ 0.87
SNX13-204ENST00000444712 NME9Q86XW9 330 aa20.5■□□□□ 0.87
SNX13-204ENST00000444712 POLKQ9UBT6 870 aa20.5■□□□□ 0.87
SNX13-204ENST00000444712 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
SNX13-204ENST00000444712 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
SNX13-204ENST00000444712 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
SNX13-204ENST00000444712 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
SNX13-204ENST00000444712 TTC21BQ7Z4L5 1316 aa20.48■□□□□ 0.87
SNX13-204ENST00000444712 TTC21AQ8NDW8 1320 aa20.48■□□□□ 0.87
SNX13-204ENST00000444712 PLEKHF1Q96S99 279 aa20.46■□□□□ 0.87
SNX13-204ENST00000444712 FCHSD2O94868 740 aa20.46■□□□□ 0.87
SNX13-204ENST00000444712 KCNA6P17658 529 aa20.46■□□□□ 0.87
SNX13-204ENST00000444712 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
SNX13-204ENST00000444712 OVOS2A0A0J9YW53 1432 aa20.46■□□□□ 0.87
SNX13-204ENST00000444712 OVOS2Q6IE36 1432 aa20.46■□□□□ 0.87
SNX13-204ENST00000444712 NEFMP07197 916 aa20.45■□□□□ 0.86
SNX13-204ENST00000444712 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
SNX13-204ENST00000444712 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
SNX13-204ENST00000444712 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
SNX13-204ENST00000444712 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
SNX13-204ENST00000444712 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
SNX13-204ENST00000444712 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
SNX13-204ENST00000444712 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
SNX13-204ENST00000444712 USP54Q70EL1 1684 aa20.42■□□□□ 0.86
SNX13-204ENST00000444712 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
SNX13-204ENST00000444712 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
SNX13-204ENST00000444712 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
SNX13-204ENST00000444712 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
SNX13-204ENST00000444712 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
SNX13-204ENST00000444712 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
SNX13-204ENST00000444712 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
SNX13-204ENST00000444712 EMILIN1Q9Y6C2 1016 aa20.4■□□□□ 0.86
SNX13-204ENST00000444712 USP31Q70CQ4 1352 aa20.4■□□□□ 0.86
SNX13-204ENST00000444712 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.86
SNX13-204ENST00000444712 IL16Q14005 1332 aa20.39■□□□□ 0.86
SNX13-204ENST00000444712 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
SNX13-204ENST00000444712 PLIN1O60240 522 aa20.37■□□□□ 0.85
SNX13-204ENST00000444712 IL13P35225 146 aa20.37■□□□□ 0.85
SNX13-204ENST00000444712 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
SNX13-204ENST00000444712 PIK3C2AO00443 1686 aa20.37■□□□□ 0.85
SNX13-204ENST00000444712 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
SNX13-204ENST00000444712 PMFBP1Q8TBY8 1022 aa20.35■□□□□ 0.85
SNX13-204ENST00000444712 FBLN1P23142 703 aa20.34■□□□□ 0.85
SNX13-204ENST00000444712 CRBNQ96SW2 442 aa20.34■□□□□ 0.85
SNX13-204ENST00000444712 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
SNX13-204ENST00000444712 RIPK4P57078 832 aa20.34■□□□□ 0.85
SNX13-204ENST00000444712 RRS1Q15050 365 aaKnown RBP20.34■□□□□ 0.85
SNX13-204ENST00000444712 TRIM35Q9UPQ4 493 aa20.32■□□□□ 0.84
SNX13-204ENST00000444712 PEAK1Q9H792 1746 aa20.32■□□□□ 0.84
SNX13-204ENST00000444712 CALD1Q05682 793 aaKnown RBP20.32■□□□□ 0.84
SNX13-204ENST00000444712 RGPD1P0DJD0 1748 aa20.31■□□□□ 0.84
SNX13-204ENST00000444712 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
SNX13-204ENST00000444712 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
SNX13-204ENST00000444712 MARF1Q9Y4F3 1742 aaKnown RBP20.3■□□□□ 0.84
SNX13-204ENST00000444712 LMOD3Q0VAK6 560 aa20.3■□□□□ 0.84
SNX13-204ENST00000444712 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
SNX13-204ENST00000444712 KIF24Q5T7B8 1368 aa20.29■□□□□ 0.84
SNX13-204ENST00000444712 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
SNX13-204ENST00000444712 BCAR3O75815 825 aa20.28■□□□□ 0.84
SNX13-204ENST00000444712 RARSP54136 660 aaKnown RBP20.28■□□□□ 0.84
SNX13-204ENST00000444712 PHF8Q9UPP1 1060 aa20.28■□□□□ 0.84
SNX13-204ENST00000444712 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
SNX13-204ENST00000444712 FLT4P35916 1363 aa20.28■□□□□ 0.84
SNX13-204ENST00000444712 HMOX1P09601 288 aa20.27■□□□□ 0.84
SNX13-204ENST00000444712 CANXP27824 592 aaKnown RBP20.27■□□□□ 0.84
SNX13-204ENST00000444712 C20orf194Q5TEA3 1177 aa20.27■□□□□ 0.84
SNX13-204ENST00000444712 EIF4A2Q14240 407 aaKnown RBP20.26■□□□□ 0.83
SNX13-204ENST00000444712 KIF1AQ12756 1690 aa20.25■□□□□ 0.83
SNX13-204ENST00000444712 AAMPQ13685 434 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms