RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 USP6P35125 1406 aa17.16■□□□□ 0.34
USP1-203ENST00000442679 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
USP1-203ENST00000442679 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
USP1-203ENST00000442679 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
USP1-203ENST00000442679 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
USP1-203ENST00000442679 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
USP1-203ENST00000442679 LRP6O75581 1613 aa17.15■□□□□ 0.34
USP1-203ENST00000442679 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
USP1-203ENST00000442679 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
USP1-203ENST00000442679 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
USP1-203ENST00000442679 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
USP1-203ENST00000442679 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
USP1-203ENST00000442679 TTC21BQ7Z4L5 1316 aa17.14■□□□□ 0.33
USP1-203ENST00000442679 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
USP1-203ENST00000442679 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
USP1-203ENST00000442679 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
USP1-203ENST00000442679 MSH5O43196 834 aa17.13■□□□□ 0.33
USP1-203ENST00000442679 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
USP1-203ENST00000442679 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
USP1-203ENST00000442679 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
USP1-203ENST00000442679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.11■□□□□ 0.33
USP1-203ENST00000442679 C8orf37Q96NL8 207 aa17.11■□□□□ 0.33
USP1-203ENST00000442679 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
USP1-203ENST00000442679 NLRP6P59044 892 aa17.1■□□□□ 0.33
USP1-203ENST00000442679 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
USP1-203ENST00000442679 NGLY1Q96IV0 654 aa17.09■□□□□ 0.33
USP1-203ENST00000442679 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
USP1-203ENST00000442679 AKAP12Q02952 1782 aa17.08■□□□□ 0.33
USP1-203ENST00000442679 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
USP1-203ENST00000442679 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
USP1-203ENST00000442679 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
USP1-203ENST00000442679 NME9Q86XW9 330 aa17.06■□□□□ 0.32
USP1-203ENST00000442679 USP19O94966 1318 aa17.05■□□□□ 0.32
USP1-203ENST00000442679 AFF2P51816 1311 aa17.05■□□□□ 0.32
USP1-203ENST00000442679 ZRANB1Q9UGI0 708 aa17.05■□□□□ 0.32
USP1-203ENST00000442679 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
USP1-203ENST00000442679 FAM83GA6ND36 823 aa17.04■□□□□ 0.32
USP1-203ENST00000442679 GCP02774 474 aa17.04■□□□□ 0.32
USP1-203ENST00000442679 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
USP1-203ENST00000442679 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
USP1-203ENST00000442679 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
USP1-203ENST00000442679 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
USP1-203ENST00000442679 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
USP1-203ENST00000442679 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
USP1-203ENST00000442679 PANK3Q9H999 370 aa17.02■□□□□ 0.32
USP1-203ENST00000442679 USP21Q9UK80 565 aa17.02■□□□□ 0.32
USP1-203ENST00000442679 USP31Q70CQ4 1352 aa17.02■□□□□ 0.31
USP1-203ENST00000442679 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
USP1-203ENST00000442679 MYOM1P52179 1685 aa17.01■□□□□ 0.31
USP1-203ENST00000442679 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
USP1-203ENST00000442679 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
USP1-203ENST00000442679 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
USP1-203ENST00000442679 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
USP1-203ENST00000442679 FYB1O15117 783 aa17■□□□□ 0.31
USP1-203ENST00000442679 SOX12O15370 315 aa17■□□□□ 0.31
USP1-203ENST00000442679 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
USP1-203ENST00000442679 ABCA3Q99758 1704 aa17■□□□□ 0.31
USP1-203ENST00000442679 NSD3Q9BZ95 1437 aa17■□□□□ 0.31
USP1-203ENST00000442679 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
USP1-203ENST00000442679 COG3Q96JB2 828 aa16.99■□□□□ 0.31
USP1-203ENST00000442679 QTRT2Q9H974 415 aaKnown RBP16.99■□□□□ 0.31
USP1-203ENST00000442679 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
USP1-203ENST00000442679 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
USP1-203ENST00000442679 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
USP1-203ENST00000442679 GGNBP2Q9H3C7 697 aa16.98■□□□□ 0.31
USP1-203ENST00000442679 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
USP1-203ENST00000442679 SLIT3O75094 1523 aa16.97■□□□□ 0.31
USP1-203ENST00000442679 MARF1Q9Y4F3 1742 aaKnown RBP16.97■□□□□ 0.31
USP1-203ENST00000442679 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
USP1-203ENST00000442679 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
USP1-203ENST00000442679 CPDO75976 1380 aa16.97■□□□□ 0.31
USP1-203ENST00000442679 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
USP1-203ENST00000442679 SLIT2O94813 1529 aa16.96■□□□□ 0.31
USP1-203ENST00000442679 TRPC5Q9UL62 973 aaPredicted RBP16.96■□□□□ 0.31
USP1-203ENST00000442679 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.3
USP1-203ENST00000442679 ARHGEF25Q86VW2 580 aa16.95■□□□□ 0.3
USP1-203ENST00000442679 OVOS2A0A0J9YW53 1432 aa16.95■□□□□ 0.3
USP1-203ENST00000442679 OVOS2Q6IE36 1432 aa16.95■□□□□ 0.3
USP1-203ENST00000442679 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
USP1-203ENST00000442679 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
USP1-203ENST00000442679 RXRBP28702 533 aa16.93■□□□□ 0.3
USP1-203ENST00000442679 EVA1CP58658 441 aa16.92■□□□□ 0.3
USP1-203ENST00000442679 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
USP1-203ENST00000442679 NFAT5O94916 1531 aa16.91■□□□□ 0.3
USP1-203ENST00000442679 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
USP1-203ENST00000442679 ATRNO75882 1429 aa16.91■□□□□ 0.3
USP1-203ENST00000442679 RBM6P78332 1123 aaKnown RBP16.91■□□□□ 0.3
USP1-203ENST00000442679 VPS72Q15906 364 aa16.91■□□□□ 0.3
USP1-203ENST00000442679 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
USP1-203ENST00000442679 CCDC9Q9Y3X0 531 aaKnown RBP16.91■□□□□ 0.3
USP1-203ENST00000442679 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
USP1-203ENST00000442679 FBLN1P23142 703 aa16.9■□□□□ 0.3
USP1-203ENST00000442679 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
USP1-203ENST00000442679 PLCH1Q4KWH8 1693 aa16.9■□□□□ 0.3
USP1-203ENST00000442679 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
USP1-203ENST00000442679 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
USP1-203ENST00000442679 NWD2Q9ULI1 1742 aa16.88■□□□□ 0.29
USP1-203ENST00000442679 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
USP1-203ENST00000442679 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
USP1-203ENST00000442679 RRS1Q15050 365 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1595.2 ms