RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 GRIPAP1Q4V328 841 aa6.61□□□□□ -1.35
CDC42BPA-207ENST00000441725 SEPT9Q9UHD8 586 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-207ENST00000441725 UNCXA6NJT0 531 aa6.6□□□□□ -1.35
CDC42BPA-207ENST00000441725 PHLDB3Q6NSJ2 640 aa6.6□□□□□ -1.35
CDC42BPA-207ENST00000441725 MRPL50Q8N5N7 158 aaKnown RBP6.6□□□□□ -1.35
CDC42BPA-207ENST00000441725 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
CDC42BPA-207ENST00000441725 FBXO45P0C2W1 286 aa6.59□□□□□ -1.35
CDC42BPA-207ENST00000441725 ELOAQ14241 798 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-207ENST00000441725 CFHP08603 1231 aa6.59□□□□□ -1.35
CDC42BPA-207ENST00000441725 B4GALNT3Q6L9W6 998 aa6.59□□□□□ -1.35
CDC42BPA-207ENST00000441725 ATP6V1AP38606 617 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 NR1H3Q13133 447 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 TXNDC2Q86VQ3 553 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 NOVA2Q9UNW9 492 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L3A6NCW0 530 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L4A6NCW7 530 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L2Q6R6M4 530 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L1Q7RTZ2 530 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 LAPTM4BQ86VI4 370 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 RETREG3Q86VR2 466 aa6.58□□□□□ -1.36
CDC42BPA-207ENST00000441725 CCER1Q8TC90 406 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-207ENST00000441725 KCTD12Q96CX2 325 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-207ENST00000441725 SHROOM4Q9ULL8 1493 aa6.56□□□□□ -1.36
CDC42BPA-207ENST00000441725 GOLGA8CPA6NN73 597 aa6.56□□□□□ -1.36
CDC42BPA-207ENST00000441725 HDGFP51858 240 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-207ENST00000441725 DEPDC4Q8N2C3 294 aa6.56□□□□□ -1.36
CDC42BPA-207ENST00000441725 SLAIN2Q9P270 581 aa6.56□□□□□ -1.36
CDC42BPA-207ENST00000441725 ZBBXA8MT70 800 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L5A8MUK1 530 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 SKIP12755 728 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 DESI1Q6ICB0 168 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 SAMD7Q7Z3H4 446 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 FAM174AQ8TBP5 190 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 RBM47A0AV96 593 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 FAM98CQ17RN3 349 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 PUS10Q3MIT2 529 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 NFATC2IPQ8NCF5 419 aa6.55□□□□□ -1.36
CDC42BPA-207ENST00000441725 RNF40O75150 1001 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 SSFA2P28290 1259 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 LYPD8Q6UX82 237 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 DNAJC14Q6Y2X3 702 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 WNT2BQ93097 391 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 SLC27A5Q9Y2P5 690 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 FAM196BA6NMK8 535 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L15C9J2P7 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L10C9JJH3 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L13C9JLJ4 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L12C9JPN9 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L11C9JVI0 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L21D6R901 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L18D6R9N7 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L22D6RA61 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L17D6RBQ6 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L19D6RCP7 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L20D6RJB6 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 SLC4A3P48751 1232 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 USP17L24Q0WX57 530 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 MORN1Q5T089 497 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 THSD4Q6ZMP0 1018 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 PLEKHM2Q8IWE5 1019 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 ZFRQ96KR1 1074 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 HCSTQ9UBK5 93 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 FKBPLQ9UIM3 349 aa6.54□□□□□ -1.36
CDC42BPA-207ENST00000441725 FAM69CQ0P6D2 419 aa6.53□□□□□ -1.36
CDC42BPA-207ENST00000441725 ANKK1Q8NFD2 765 aa6.53□□□□□ -1.36
CDC42BPA-207ENST00000441725 MKRN1Q9UHC7 482 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-207ENST00000441725 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.36
CDC42BPA-207ENST00000441725 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.36
CDC42BPA-207ENST00000441725 ARID4AP29374 1257 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-207ENST00000441725 PTK7Q13308 1070 aa6.52□□□□□ -1.37
CDC42BPA-207ENST00000441725 RNF19BQ6ZMZ0 732 aa6.52□□□□□ -1.37
CDC42BPA-207ENST00000441725 SERPINB4P48594 390 aa6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 NCOA4Q13772 614 aa6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 KIAA1522Q9P206 1035 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 MAP10Q9P2G4 905 aa6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 F12P00748 615 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 SCNN1AP37088 669 aa6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 BLOC1S3Q6QNY0 202 aa6.51□□□□□ -1.37
CDC42BPA-207ENST00000441725 SOWAHBA6NEL2 793 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 SOWAHDA6NJG2 315 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 RASA1P20936 1047 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 PTPN5P54829 565 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 MRRFQ96E11 262 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 BCAMP50895 628 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 Q3C1V9 767 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 KMT5BQ4FZB7 885 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 CLP1Q92989 425 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 USP35Q9P2H5 1018 aa6.5□□□□□ -1.37
CDC42BPA-207ENST00000441725 KCNH2Q12809 1159 aa6.49□□□□□ -1.37
CDC42BPA-207ENST00000441725 FAM200AQ8TCP9 573 aa6.49□□□□□ -1.37
CDC42BPA-207ENST00000441725 CEP126Q9P2H0 1117 aa6.49□□□□□ -1.37
CDC42BPA-207ENST00000441725 LARP1Q6PKG0 1096 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 LRCH3Q96II8 777 aa6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 USB1Q9BQ65 265 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 ATP5J2-PTCD1G3V325 749 aa6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 ACTN4O43707 911 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 ZNF16P17020 682 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 ERCC3P19447 782 aa6.48□□□□□ -1.37
CDC42BPA-207ENST00000441725 ATP2B4P23634 1241 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms