RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 GPRASP1Q5JY77 1395 aa11.81□□□□□ -0.52
LYSMD1-202ENST00000440902 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
LYSMD1-202ENST00000440902 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
LYSMD1-202ENST00000440902 KRT27Q7Z3Y8 459 aa11.8□□□□□ -0.52
LYSMD1-202ENST00000440902 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
LYSMD1-202ENST00000440902 RGPD1P0DJD0 1748 aa11.79□□□□□ -0.52
LYSMD1-202ENST00000440902 ATP7BP35670 1465 aa11.78□□□□□ -0.52
LYSMD1-202ENST00000440902 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
LYSMD1-202ENST00000440902 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
LYSMD1-202ENST00000440902 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
LYSMD1-202ENST00000440902 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
LYSMD1-202ENST00000440902 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
LYSMD1-202ENST00000440902 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
LYSMD1-202ENST00000440902 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
LYSMD1-202ENST00000440902 THSD7AQ9UPZ6 1657 aa11.77□□□□□ -0.53
LYSMD1-202ENST00000440902 LRP5O75197 1615 aa11.76□□□□□ -0.53
LYSMD1-202ENST00000440902 PRDM11Q9NQV5 511 aa11.76□□□□□ -0.53
LYSMD1-202ENST00000440902 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
LYSMD1-202ENST00000440902 BAG6P46379 1132 aa11.75□□□□□ -0.53
LYSMD1-202ENST00000440902 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
LYSMD1-202ENST00000440902 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
LYSMD1-202ENST00000440902 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
LYSMD1-202ENST00000440902 PSDA5PKW4 1024 aaPredicted RBP11.73□□□□□ -0.53
LYSMD1-202ENST00000440902 SPATA31A5Q5VU36 1347 aa11.73□□□□□ -0.53
LYSMD1-202ENST00000440902 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
LYSMD1-202ENST00000440902 SPATA31A7Q8IWB4 1347 aa11.73□□□□□ -0.53
LYSMD1-202ENST00000440902 KIAA0232Q92628 1395 aa11.73□□□□□ -0.53
LYSMD1-202ENST00000440902 NRKQ7Z2Y5 1582 aa11.72□□□□□ -0.53
LYSMD1-202ENST00000440902 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
LYSMD1-202ENST00000440902 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
LYSMD1-202ENST00000440902 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
LYSMD1-202ENST00000440902 STRN4Q9NRL3 753 aa11.72□□□□□ -0.53
LYSMD1-202ENST00000440902 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
LYSMD1-202ENST00000440902 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
LYSMD1-202ENST00000440902 ACEP12821 1306 aa11.7□□□□□ -0.54
LYSMD1-202ENST00000440902 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
LYSMD1-202ENST00000440902 POLR3AO14802 1390 aaPredicted RBP11.69□□□□□ -0.54
LYSMD1-202ENST00000440902 SPATA31A1Q5TZJ5 1347 aa11.69□□□□□ -0.54
LYSMD1-202ENST00000440902 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
LYSMD1-202ENST00000440902 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
LYSMD1-202ENST00000440902 HRCP23327 699 aa11.68□□□□□ -0.54
LYSMD1-202ENST00000440902 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
LYSMD1-202ENST00000440902 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
LYSMD1-202ENST00000440902 RREB1Q92766 1687 aa11.67□□□□□ -0.54
LYSMD1-202ENST00000440902 CAMTA1Q9Y6Y1 1673 aa11.67□□□□□ -0.54
LYSMD1-202ENST00000440902 DISP2A7MBM2 1401 aa11.67□□□□□ -0.54
LYSMD1-202ENST00000440902 SSH2Q76I76 1423 aa11.67□□□□□ -0.54
LYSMD1-202ENST00000440902 TRIM37O94972 964 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 EVA1CP58658 441 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 EZH2Q15910 746 aaKnown RBP11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
LYSMD1-202ENST00000440902 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
LYSMD1-202ENST00000440902 PARP4Q9UKK3 1724 aaKnown RBP11.65□□□□□ -0.54
LYSMD1-202ENST00000440902 CENPJQ9HC77 1338 aaPredicted RBP11.64□□□□□ -0.55
LYSMD1-202ENST00000440902 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
LYSMD1-202ENST00000440902 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
LYSMD1-202ENST00000440902 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
LYSMD1-202ENST00000440902 CPDO75976 1380 aa11.64□□□□□ -0.55
LYSMD1-202ENST00000440902 USP19O94966 1318 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 MSH5O43196 834 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 APBA3O96018 575 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 PDE3BQ13370 1112 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 CABP2Q9NPB3 220 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 TRPM1Q7Z4N2 1603 aa11.63□□□□□ -0.55
LYSMD1-202ENST00000440902 PIK3C2AO00443 1686 aa11.62□□□□□ -0.55
LYSMD1-202ENST00000440902 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
LYSMD1-202ENST00000440902 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
LYSMD1-202ENST00000440902 CAMKK2Q96RR4 588 aa11.62□□□□□ -0.55
LYSMD1-202ENST00000440902 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
LYSMD1-202ENST00000440902 RGPD5Q99666 1765 aa11.62□□□□□ -0.55
LYSMD1-202ENST00000440902 LRRC37A3O60309 1634 aa11.61□□□□□ -0.55
LYSMD1-202ENST00000440902 SBF2Q86WG5 1849 aa11.61□□□□□ -0.55
LYSMD1-202ENST00000440902 GCP02774 474 aa11.61□□□□□ -0.55
LYSMD1-202ENST00000440902 TCP11L2Q8N4U5 519 aa11.61□□□□□ -0.55
LYSMD1-202ENST00000440902 AKAP12Q02952 1782 aa11.61□□□□□ -0.55
LYSMD1-202ENST00000440902 USP6P35125 1406 aa11.6□□□□□ -0.55
LYSMD1-202ENST00000440902 SLIT3O75094 1523 aa11.6□□□□□ -0.55
LYSMD1-202ENST00000440902 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
LYSMD1-202ENST00000440902 COL18A1P39060 1754 aa11.59□□□□□ -0.55
LYSMD1-202ENST00000440902 CABP1Q9NZU7 370 aa11.59□□□□□ -0.55
LYSMD1-202ENST00000440902 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
LYSMD1-202ENST00000440902 CRB1P82279 1406 aa11.59□□□□□ -0.55
LYSMD1-202ENST00000440902 BRD4O60885 1362 aaPredicted RBP11.58□□□□□ -0.56
LYSMD1-202ENST00000440902 NLRP6P59044 892 aa11.58□□□□□ -0.56
LYSMD1-202ENST00000440902 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.56
LYSMD1-202ENST00000440902 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-202ENST00000440902 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
LYSMD1-202ENST00000440902 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
LYSMD1-202ENST00000440902 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
LYSMD1-202ENST00000440902 OVOS2A0A0J9YW53 1432 aa11.56□□□□□ -0.56
LYSMD1-202ENST00000440902 OVOS2Q6IE36 1432 aa11.56□□□□□ -0.56
LYSMD1-202ENST00000440902 L3MBTL2Q969R5 705 aa11.56□□□□□ -0.56
LYSMD1-202ENST00000440902 EVC2Q86UK5 1308 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms