RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 ABTB2Q8N961 1025 aa31.46■■■□□ 2.63
CNOT3-203ENST00000440571 C8orf37Q96NL8 207 aa31.46■■■□□ 2.63
CNOT3-203ENST00000440571 HDGFL2Q7Z4V5 671 aaPredicted RBP31.45■■■□□ 2.63
CNOT3-203ENST00000440571 BRD4O60885 1362 aaPredicted RBP31.44■■■□□ 2.62
CNOT3-203ENST00000440571 NGLY1Q96IV0 654 aa31.44■■■□□ 2.62
CNOT3-203ENST00000440571 RGS17Q9UGC6 210 aaPredicted RBP31.44■■■□□ 2.62
CNOT3-203ENST00000440571 NUTM2GQ5VZR2 741 aa31.43■■■□□ 2.62
CNOT3-203ENST00000440571 TERF2IPQ9NYB0 399 aa31.43■■■□□ 2.62
CNOT3-203ENST00000440571 USP6P35125 1406 aa31.41■■■□□ 2.62
CNOT3-203ENST00000440571 KTN1Q86UP2 1357 aaKnown RBP31.4■■■□□ 2.62
CNOT3-203ENST00000440571 COL22A1Q8NFW1 1626 aaPredicted RBP31.39■■■□□ 2.62
CNOT3-203ENST00000440571 CPSF1Q10570 1443 aaKnown RBP31.39■■■□□ 2.62
CNOT3-203ENST00000440571 ZNF772Q68DY9 489 aaPredicted RBP31.38■■■□□ 2.61
CNOT3-203ENST00000440571 NLRP13Q86W25 1043 aa31.38■■■□□ 2.61
CNOT3-203ENST00000440571 TTC21BQ7Z4L5 1316 aa31.38■■■□□ 2.61
CNOT3-203ENST00000440571 AFF2P51816 1311 aa31.37■■■□□ 2.61
CNOT3-203ENST00000440571 NINLQ9Y2I6 1382 aa31.37■■■□□ 2.61
CNOT3-203ENST00000440571 TRPM3Q9HCF6 1732 aaPredicted RBP31.36■■■□□ 2.61
CNOT3-203ENST00000440571 NLRP6P59044 892 aa31.35■■■□□ 2.61
CNOT3-203ENST00000440571 POLR3GLQ9BT43 218 aa31.35■■■□□ 2.61
CNOT3-203ENST00000440571 SSH2Q76I76 1423 aa31.33■■■□□ 2.61
CNOT3-203ENST00000440571 TTC21AQ8NDW8 1320 aa31.33■■■□□ 2.61
CNOT3-203ENST00000440571 POTEAQ6S8J7 498 aa31.32■■■□□ 2.6
CNOT3-203ENST00000440571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.32■■■□□ 2.6
CNOT3-203ENST00000440571 FNBP4Q8N3X1 1017 aaPredicted RBP31.32■■■□□ 2.6
CNOT3-203ENST00000440571 USP21Q9UK80 565 aa31.3■■■□□ 2.6
CNOT3-203ENST00000440571 CD163L1Q9NR16 1453 aa31.29■■■□□ 2.6
CNOT3-203ENST00000440571 A0A1W2PP64 1363 aa31.29■■■□□ 2.6
CNOT3-203ENST00000440571 ALS2Q96Q42 1657 aa31.29■■■□□ 2.6
CNOT3-203ENST00000440571 FAM83GA6ND36 823 aa31.28■■■□□ 2.6
CNOT3-203ENST00000440571 ILDR2Q71H61 639 aa31.27■■■□□ 2.6
CNOT3-203ENST00000440571 QTRT2Q9H974 415 aaKnown RBP31.27■■■□□ 2.6
CNOT3-203ENST00000440571 GCP02774 474 aa31.26■■■□□ 2.59
CNOT3-203ENST00000440571 ZC3H6P61129 1189 aaKnown RBP31.25■■■□□ 2.59
CNOT3-203ENST00000440571 ANKRD36BQ8N2N9 1353 aa31.25■■■□□ 2.59
CNOT3-203ENST00000440571 USP19O94966 1318 aa31.24■■■□□ 2.59
CNOT3-203ENST00000440571 C11orf95C9JLR9 678 aaPredicted RBP31.24■■■□□ 2.59
CNOT3-203ENST00000440571 EDC4Q6P2E9 1401 aaKnown RBP31.23■■■□□ 2.59
CNOT3-203ENST00000440571 NME9Q86XW9 330 aa31.22■■■□□ 2.59
CNOT3-203ENST00000440571 PRDM11Q9NQV5 511 aa31.22■■■□□ 2.59
CNOT3-203ENST00000440571 ZRANB1Q9UGI0 708 aa31.21■■■□□ 2.59
CNOT3-203ENST00000440571 UNC5CLQ8IV45 518 aa31.2■■■□□ 2.59
CNOT3-203ENST00000440571 TRPC5Q9UL62 973 aaPredicted RBP31.2■■■□□ 2.59
CNOT3-203ENST00000440571 RXRBP28702 533 aa31.19■■■□□ 2.58
CNOT3-203ENST00000440571 KCNH5Q8NCM2 988 aa31.18■■■□□ 2.58
CNOT3-203ENST00000440571 KIAA0232Q92628 1395 aa31.17■■■□□ 2.58
CNOT3-203ENST00000440571 CHRNA2Q15822 529 aa31.17■■■□□ 2.58
CNOT3-203ENST00000440571 AKAP12Q02952 1782 aa31.17■■■□□ 2.58
CNOT3-203ENST00000440571 BTG4Q9NY30 223 aa31.16■■■□□ 2.58
CNOT3-203ENST00000440571 SOX12O15370 315 aa31.15■■■□□ 2.58
CNOT3-203ENST00000440571 CARD14Q9BXL6 1004 aa31.15■■■□□ 2.58
CNOT3-203ENST00000440571 USP31Q70CQ4 1352 aa31.15■■■□□ 2.58
CNOT3-203ENST00000440571 BCL9LQ86UU0 1499 aa31.14■■■□□ 2.58
CNOT3-203ENST00000440571 ZBTB7CA1YPR0 619 aa31.13■■■□□ 2.57
CNOT3-203ENST00000440571 ZEB1P37275 1124 aaPredicted RBP31.13■■■□□ 2.57
CNOT3-203ENST00000440571 RBM6P78332 1123 aaKnown RBP31.13■■■□□ 2.57
CNOT3-203ENST00000440571 SLIT2O94813 1529 aa31.13■■■□□ 2.57
CNOT3-203ENST00000440571 CPDO75976 1380 aa31.11■■■□□ 2.57
CNOT3-203ENST00000440571 KIF7Q2M1P5 1343 aa31.11■■■□□ 2.57
CNOT3-203ENST00000440571 COG3Q96JB2 828 aa31.11■■■□□ 2.57
CNOT3-203ENST00000440571 PANK3Q9H999 370 aa31.11■■■□□ 2.57
CNOT3-203ENST00000440571 FYB1O15117 783 aa31.1■■■□□ 2.57
CNOT3-203ENST00000440571 MON2Q7Z3U7 1717 aa31.1■■■□□ 2.57
CNOT3-203ENST00000440571 EVA1CP58658 441 aa31.08■■■□□ 2.57
CNOT3-203ENST00000440571 GJD4Q96KN9 370 aaPredicted RBP31.08■■■□□ 2.57
CNOT3-203ENST00000440571 CCDC9Q9Y3X0 531 aaKnown RBP31.08■■■□□ 2.57
CNOT3-203ENST00000440571 PIK3C2AO00443 1686 aa31.08■■■□□ 2.57
CNOT3-203ENST00000440571 ABCA3Q99758 1704 aa31.07■■■□□ 2.56
CNOT3-203ENST00000440571 VPS72Q15906 364 aa31.07■■■□□ 2.56
CNOT3-203ENST00000440571 ARHGEF25Q86VW2 580 aa31.07■■■□□ 2.56
CNOT3-203ENST00000440571 NRKQ7Z2Y5 1582 aa31.07■■■□□ 2.56
CNOT3-203ENST00000440571 ATRNO75882 1429 aa31.07■■■□□ 2.56
CNOT3-203ENST00000440571 GGNBP2Q9H3C7 697 aa31.06■■■□□ 2.56
CNOT3-203ENST00000440571 MARF1Q9Y4F3 1742 aaKnown RBP31.06■■■□□ 2.56
CNOT3-203ENST00000440571 SLIT3O75094 1523 aa31.04■■■□□ 2.56
CNOT3-203ENST00000440571 STRN4Q9NRL3 753 aa31.04■■■□□ 2.56
CNOT3-203ENST00000440571 NSD3Q9BZ95 1437 aa31.04■■■□□ 2.56
CNOT3-203ENST00000440571 CRYBG1Q9Y4K1 1723 aa31.04■■■□□ 2.56
CNOT3-203ENST00000440571 PHRF1Q9P1Y6 1649 aaKnown RBP31.02■■■□□ 2.56
CNOT3-203ENST00000440571 AATKQ6ZMQ8 1374 aa31.01■■■□□ 2.55
CNOT3-203ENST00000440571 CGNL1Q0VF96 1302 aa31■■■□□ 2.55
CNOT3-203ENST00000440571 COL14A1Q05707 1796 aaKnown RBP31■■■□□ 2.55
CNOT3-203ENST00000440571 WASHC2AQ641Q2 1341 aa30.98■■■□□ 2.55
CNOT3-203ENST00000440571 OVOS2A0A0J9YW53 1432 aa30.98■■■□□ 2.55
CNOT3-203ENST00000440571 OVOS2Q6IE36 1432 aa30.98■■■□□ 2.55
CNOT3-203ENST00000440571 CCDC7Q96M83 1385 aa30.98■■■□□ 2.55
CNOT3-203ENST00000440571 AXIN2Q9Y2T1 843 aa30.97■■■□□ 2.55
CNOT3-203ENST00000440571 MYOM1P52179 1685 aa30.96■■■□□ 2.55
CNOT3-203ENST00000440571 KNSTRNQ9Y448 316 aa30.95■■■□□ 2.55
CNOT3-203ENST00000440571 FBLN1P23142 703 aa30.94■■■□□ 2.54
CNOT3-203ENST00000440571 LARP1Q6PKG0 1096 aaKnown RBP30.93■■■□□ 2.54
CNOT3-203ENST00000440571 SPATA31A5Q5VU36 1347 aa30.93■■■□□ 2.54
CNOT3-203ENST00000440571 SPATA31A7Q8IWB4 1347 aa30.93■■■□□ 2.54
CNOT3-203ENST00000440571 CAMTA1Q9Y6Y1 1673 aa30.92■■■□□ 2.54
CNOT3-203ENST00000440571 NWD2Q9ULI1 1742 aa30.92■■■□□ 2.54
CNOT3-203ENST00000440571 PLCH1Q4KWH8 1693 aa30.91■■■□□ 2.54
CNOT3-203ENST00000440571 NFAT5O94916 1531 aa30.91■■■□□ 2.54
CNOT3-203ENST00000440571 CDK12Q9NYV4 1490 aaPredicted RBP30.9■■■□□ 2.54
CNOT3-203ENST00000440571 SOCS7O14512 581 aa30.89■■■□□ 2.54
CNOT3-203ENST00000440571 ONECUT3O60422 494 aaPredicted RBP30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms