RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MED1Q15648 1581 aaPredicted RBP6.48□□□□□ -1.37
EDEM3-203ENST00000439962 SOS2Q07890 1332 aaPredicted RBP6.48□□□□□ -1.37
EDEM3-203ENST00000439962 TRPM1Q7Z4N2 1603 aa6.48□□□□□ -1.37
EDEM3-203ENST00000439962 RXRBP28702 533 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 IFT172Q9UG01 1749 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 PNPLA6Q8IY17 1366 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 PPIP5K1Q6PFW1 1433 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 FAM83GA6ND36 823 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 EVA1CP58658 441 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 SPATA31A3Q5VYP0 1347 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 NRXN1Q9ULB1 1477 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 KAT6BQ8WYB5 2073 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
EDEM3-203ENST00000439962 NME9Q86XW9 330 aa6.47□□□□□ -1.37
EDEM3-203ENST00000439962 HSPA5P11021 654 aaKnown RBP6.46□□□□□ -1.38
EDEM3-203ENST00000439962 SUPT16HQ9Y5B9 1047 aaKnown RBP6.46□□□□□ -1.38
EDEM3-203ENST00000439962 USP47Q96K76 1375 aa6.46□□□□□ -1.38
EDEM3-203ENST00000439962 CSB-PGBD3P0DP91 1061 aa6.46□□□□□ -1.38
EDEM3-203ENST00000439962 GGNBP2Q9H3C7 697 aa6.46□□□□□ -1.38
EDEM3-203ENST00000439962 WASHC2AQ641Q2 1341 aa6.46□□□□□ -1.38
EDEM3-203ENST00000439962 STAC3Q96MF2 364 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 SPATA31A6Q5VVP1 1343 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 INSRP06213 1382 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 TECPR2O15040 1411 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 DCCP43146 1447 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 NCOA3Q9Y6Q9 1424 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 KIAA1210Q9ULL0 1709 aa6.45□□□□□ -1.38
EDEM3-203ENST00000439962 ZNF772Q68DY9 489 aaPredicted RBP6.45□□□□□ -1.38
EDEM3-203ENST00000439962 EIF3AQ14152 1382 aaKnown RBP6.45□□□□□ -1.38
EDEM3-203ENST00000439962 COL16A1Q07092 1604 aaPredicted RBP6.44□□□□□ -1.38
EDEM3-203ENST00000439962 KIAA0232Q92628 1395 aa6.44□□□□□ -1.38
EDEM3-203ENST00000439962 GCP02774 474 aa6.43□□□□□ -1.38
EDEM3-203ENST00000439962 TMF1P82094 1093 aa6.43□□□□□ -1.38
EDEM3-203ENST00000439962 RRS1Q15050 365 aaKnown RBP6.43□□□□□ -1.38
EDEM3-203ENST00000439962 C11orf95C9JLR9 678 aaPredicted RBP6.43□□□□□ -1.38
EDEM3-203ENST00000439962 SOCS7O14512 581 aa6.43□□□□□ -1.38
EDEM3-203ENST00000439962 HDGFL2Q7Z4V5 671 aaPredicted RBP6.43□□□□□ -1.38
EDEM3-203ENST00000439962 SIRT1Q96EB6 747 aa6.43□□□□□ -1.38
EDEM3-203ENST00000439962 TESK2Q96S53 571 aa6.43□□□□□ -1.38
EDEM3-203ENST00000439962 LARP1Q6PKG0 1096 aaKnown RBP6.43□□□□□ -1.38
EDEM3-203ENST00000439962 NLRP13Q86W25 1043 aa6.43□□□□□ -1.38
EDEM3-203ENST00000439962 ATP7BP35670 1465 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 ARHGEF28Q8N1W1 1705 aaKnown RBP6.42□□□□□ -1.38
EDEM3-203ENST00000439962 TOM1L2Q6ZVM7 507 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 TRPC5Q9UL62 973 aaPredicted RBP6.42□□□□□ -1.38
EDEM3-203ENST00000439962 TNS3Q68CZ2 1445 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 PXDNQ92626 1479 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 NEFLP07196 543 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 UNC5CLQ8IV45 518 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 AXIN2Q9Y2T1 843 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 CDC42BPGQ6DT37 1551 aa6.42□□□□□ -1.38
EDEM3-203ENST00000439962 TTC21BQ7Z4L5 1316 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 USHBP1Q8N6Y0 703 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 GJD4Q96KN9 370 aaPredicted RBP6.41□□□□□ -1.38
EDEM3-203ENST00000439962 NLRP2Q9NX02 1062 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 RBM6P78332 1123 aaKnown RBP6.41□□□□□ -1.38
EDEM3-203ENST00000439962 CC2D1BQ5T0F9 858 aaKnown RBP6.41□□□□□ -1.38
EDEM3-203ENST00000439962 SEPT12Q8IYM1 358 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 QRICH2Q9H0J4 1663 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 TULP4Q9NRJ4 1543 aa6.41□□□□□ -1.38
EDEM3-203ENST00000439962 PLEKHG3A1L390 1219 aa6.4□□□□□ -1.38
EDEM3-203ENST00000439962 PRKRIP1Q9H875 184 aaPredicted RBP6.4□□□□□ -1.38
EDEM3-203ENST00000439962 USP32Q8NFA0 1604 aa6.4□□□□□ -1.38
EDEM3-203ENST00000439962 KIF7Q2M1P5 1343 aa6.4□□□□□ -1.38
EDEM3-203ENST00000439962 ZBED9Q6R2W3 1325 aa6.4□□□□□ -1.38
EDEM3-203ENST00000439962 AMPHP49418 695 aa6.4□□□□□ -1.38
EDEM3-203ENST00000439962 DEFB132Q7Z7B7 95 aa6.4□□□□□ -1.38
EDEM3-203ENST00000439962 A0A1W2PP64 1363 aa6.4□□□□□ -1.39
EDEM3-203ENST00000439962 FMN2Q9NZ56 1722 aa6.4□□□□□ -1.39
EDEM3-203ENST00000439962 AHDC1Q5TGY3 1603 aaPredicted RBP6.4□□□□□ -1.39
EDEM3-203ENST00000439962 SENP3-EIF4A1A0A087X0R7 540 aa6.39□□□□□ -1.39
EDEM3-203ENST00000439962 PANK3Q9H999 370 aa6.39□□□□□ -1.39
EDEM3-203ENST00000439962 ARHGEF10O15013 1369 aa6.39□□□□□ -1.39
EDEM3-203ENST00000439962 COG3Q96JB2 828 aa6.39□□□□□ -1.39
EDEM3-203ENST00000439962 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
EDEM3-203ENST00000439962 DLC1Q96QB1 1528 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 SYTL4Q96C24 671 aaPredicted RBP6.38□□□□□ -1.39
EDEM3-203ENST00000439962 ZNF692Q9BU19 519 aaPredicted RBP6.38□□□□□ -1.39
EDEM3-203ENST00000439962 CARD14Q9BXL6 1004 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 USP6P35125 1406 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 BCL9LQ86UU0 1499 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 KNDC1Q76NI1 1749 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 NHSL1Q5SYE7 1610 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 ATAD2Q6PL18 1390 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 DDX54Q8TDD1 881 aaKnown RBP6.38□□□□□ -1.39
EDEM3-203ENST00000439962 EMILIN1Q9Y6C2 1016 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 ANKARQ7Z5J8 1434 aa6.38□□□□□ -1.39
EDEM3-203ENST00000439962 TRIM37O94972 964 aa6.37□□□□□ -1.39
EDEM3-203ENST00000439962 PDE3BQ13370 1112 aa6.37□□□□□ -1.39
EDEM3-203ENST00000439962 ACSBG1Q96GR2 724 aa6.37□□□□□ -1.39
EDEM3-203ENST00000439962 BRD4O60885 1362 aaPredicted RBP6.37□□□□□ -1.39
EDEM3-203ENST00000439962 SMG6Q86US8 1419 aaKnown RBP6.37□□□□□ -1.39
EDEM3-203ENST00000439962 FYB1O15117 783 aa6.37□□□□□ -1.39
EDEM3-203ENST00000439962 SLC24A1O60721 1099 aa6.37□□□□□ -1.39
EDEM3-203ENST00000439962 SBNO1A3KN83 1393 aa6.37□□□□□ -1.39
EDEM3-203ENST00000439962 RALBP1Q15311 655 aa6.36□□□□□ -1.39
EDEM3-203ENST00000439962 HSP90AB2PQ58FF8 381 aa6.36□□□□□ -1.39
EDEM3-203ENST00000439962 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
EDEM3-203ENST00000439962 KRT27Q7Z3Y8 459 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms