RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ADAMTS2O95450 1211 aa16.52■□□□□ 0.24
HSPG2-206ENST00000439717 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.24
HSPG2-206ENST00000439717 TMC1Q8TDI8 760 aa16.52■□□□□ 0.24
HSPG2-206ENST00000439717 RGS17Q9UGC6 210 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-206ENST00000439717 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
HSPG2-206ENST00000439717 HAP1P54257 671 aaPredicted RBP16.5■□□□□ 0.23
HSPG2-206ENST00000439717 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
HSPG2-206ENST00000439717 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
HSPG2-206ENST00000439717 C8orf37Q96NL8 207 aa16.5■□□□□ 0.23
HSPG2-206ENST00000439717 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
HSPG2-206ENST00000439717 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
HSPG2-206ENST00000439717 AKAP12Q02952 1782 aa16.5■□□□□ 0.23
HSPG2-206ENST00000439717 KTN1Q86UP2 1357 aaKnown RBP16.5■□□□□ 0.23
HSPG2-206ENST00000439717 CD163L1Q9NR16 1453 aa16.49■□□□□ 0.23
HSPG2-206ENST00000439717 ZNF772Q68DY9 489 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-206ENST00000439717 CABLES1Q8TDN4 633 aa16.49■□□□□ 0.23
HSPG2-206ENST00000439717 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
HSPG2-206ENST00000439717 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
HSPG2-206ENST00000439717 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
HSPG2-206ENST00000439717 NLRP13Q86W25 1043 aa16.47■□□□□ 0.23
HSPG2-206ENST00000439717 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-206ENST00000439717 ABCA3Q99758 1704 aa16.47■□□□□ 0.23
HSPG2-206ENST00000439717 MARF1Q9Y4F3 1742 aaKnown RBP16.47■□□□□ 0.23
HSPG2-206ENST00000439717 AFF2P51816 1311 aa16.46■□□□□ 0.23
HSPG2-206ENST00000439717 MON2Q7Z3U7 1717 aa16.46■□□□□ 0.23
HSPG2-206ENST00000439717 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
HSPG2-206ENST00000439717 A0A1W2PP64 1363 aa16.45■□□□□ 0.22
HSPG2-206ENST00000439717 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
HSPG2-206ENST00000439717 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
HSPG2-206ENST00000439717 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
HSPG2-206ENST00000439717 USP19O94966 1318 aa16.45■□□□□ 0.22
HSPG2-206ENST00000439717 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
HSPG2-206ENST00000439717 NUTM2GQ5VZR2 741 aa16.44■□□□□ 0.22
HSPG2-206ENST00000439717 NLRP6P59044 892 aa16.43■□□□□ 0.22
HSPG2-206ENST00000439717 POTEAQ6S8J7 498 aa16.43■□□□□ 0.22
HSPG2-206ENST00000439717 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
HSPG2-206ENST00000439717 USP21Q9UK80 565 aa16.42■□□□□ 0.22
HSPG2-206ENST00000439717 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
HSPG2-206ENST00000439717 SLIT2O94813 1529 aa16.41■□□□□ 0.22
HSPG2-206ENST00000439717 USP31Q70CQ4 1352 aa16.4■□□□□ 0.22
HSPG2-206ENST00000439717 FAM83GA6ND36 823 aa16.4■□□□□ 0.22
HSPG2-206ENST00000439717 GCP02774 474 aa16.4■□□□□ 0.22
HSPG2-206ENST00000439717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
HSPG2-206ENST00000439717 SLIT3O75094 1523 aa16.4■□□□□ 0.22
HSPG2-206ENST00000439717 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
HSPG2-206ENST00000439717 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.21
HSPG2-206ENST00000439717 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
HSPG2-206ENST00000439717 BCL9LQ86UU0 1499 aa16.39■□□□□ 0.21
HSPG2-206ENST00000439717 MYOM1P52179 1685 aa16.39■□□□□ 0.21
HSPG2-206ENST00000439717 CPDO75976 1380 aa16.38■□□□□ 0.21
HSPG2-206ENST00000439717 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
HSPG2-206ENST00000439717 UNC5CLQ8IV45 518 aa16.38■□□□□ 0.21
HSPG2-206ENST00000439717 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
HSPG2-206ENST00000439717 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
HSPG2-206ENST00000439717 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
HSPG2-206ENST00000439717 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
HSPG2-206ENST00000439717 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
HSPG2-206ENST00000439717 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-206ENST00000439717 RXRBP28702 533 aa16.37■□□□□ 0.21
HSPG2-206ENST00000439717 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
HSPG2-206ENST00000439717 NME9Q86XW9 330 aa16.37■□□□□ 0.21
HSPG2-206ENST00000439717 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
HSPG2-206ENST00000439717 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
HSPG2-206ENST00000439717 ATRNO75882 1429 aa16.36■□□□□ 0.21
HSPG2-206ENST00000439717 PLCH1Q4KWH8 1693 aa16.36■□□□□ 0.21
HSPG2-206ENST00000439717 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
HSPG2-206ENST00000439717 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
HSPG2-206ENST00000439717 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
HSPG2-206ENST00000439717 ZRANB1Q9UGI0 708 aa16.34■□□□□ 0.21
HSPG2-206ENST00000439717 OVOS2A0A0J9YW53 1432 aa16.34■□□□□ 0.21
HSPG2-206ENST00000439717 OVOS2Q6IE36 1432 aa16.34■□□□□ 0.21
HSPG2-206ENST00000439717 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
HSPG2-206ENST00000439717 VPS72Q15906 364 aa16.33■□□□□ 0.2
HSPG2-206ENST00000439717 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
HSPG2-206ENST00000439717 KIF7Q2M1P5 1343 aa16.33■□□□□ 0.2
HSPG2-206ENST00000439717 CDK12Q9NYV4 1490 aaPredicted RBP16.33■□□□□ 0.2
HSPG2-206ENST00000439717 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
HSPG2-206ENST00000439717 COG3Q96JB2 828 aa16.32■□□□□ 0.2
HSPG2-206ENST00000439717 GJD4Q96KN9 370 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-206ENST00000439717 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
HSPG2-206ENST00000439717 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
HSPG2-206ENST00000439717 NFAT5O94916 1531 aa16.31■□□□□ 0.2
HSPG2-206ENST00000439717 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
HSPG2-206ENST00000439717 FYB1O15117 783 aa16.31■□□□□ 0.2
HSPG2-206ENST00000439717 PANK3Q9H999 370 aa16.3■□□□□ 0.2
HSPG2-206ENST00000439717 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
HSPG2-206ENST00000439717 SOX12O15370 315 aa16.29■□□□□ 0.2
HSPG2-206ENST00000439717 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
HSPG2-206ENST00000439717 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
HSPG2-206ENST00000439717 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
HSPG2-206ENST00000439717 EVA1CP58658 441 aa16.28■□□□□ 0.2
HSPG2-206ENST00000439717 ABCC6O95255 1503 aa16.28■□□□□ 0.2
HSPG2-206ENST00000439717 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.2
HSPG2-206ENST00000439717 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
HSPG2-206ENST00000439717 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
HSPG2-206ENST00000439717 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
HSPG2-206ENST00000439717 GLI3P10071 1580 aa16.26■□□□□ 0.19
HSPG2-206ENST00000439717 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
HSPG2-206ENST00000439717 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
HSPG2-206ENST00000439717 COL18A1P39060 1754 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms