RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 PSMA5P28066 241 aa16.49■□□□□ 0.23
LRCH3-206ENST00000438796 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
LRCH3-206ENST00000438796 DHX57Q6P158 1386 aaKnown RBP16.49■□□□□ 0.23
LRCH3-206ENST00000438796 GPRASP1Q5JY77 1395 aa16.49■□□□□ 0.23
LRCH3-206ENST00000438796 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
LRCH3-206ENST00000438796 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
LRCH3-206ENST00000438796 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
LRCH3-206ENST00000438796 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
LRCH3-206ENST00000438796 CCDC30Q5VVM6 783 aa16.48■□□□□ 0.23
LRCH3-206ENST00000438796 PLCD4Q9BRC7 762 aa16.48■□□□□ 0.23
LRCH3-206ENST00000438796 CALRP27797 417 aaKnown RBP16.48■□□□□ 0.23
LRCH3-206ENST00000438796 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
LRCH3-206ENST00000438796 RDXP35241 583 aaKnown RBP16.47■□□□□ 0.23
LRCH3-206ENST00000438796 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
LRCH3-206ENST00000438796 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
LRCH3-206ENST00000438796 CLASRPQ8N2M8 674 aaKnown RBP16.47■□□□□ 0.23
LRCH3-206ENST00000438796 CCDC97Q96F63 343 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-206ENST00000438796 SEPT11Q9NVA2 429 aaKnown RBP16.47■□□□□ 0.23
LRCH3-206ENST00000438796 TXLNAP40222 546 aa16.47■□□□□ 0.23
LRCH3-206ENST00000438796 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
LRCH3-206ENST00000438796 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
LRCH3-206ENST00000438796 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
LRCH3-206ENST00000438796 SPC24Q8NBT2 197 aa16.46■□□□□ 0.23
LRCH3-206ENST00000438796 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
LRCH3-206ENST00000438796 HSP90B2PQ58FF3 399 aa16.46■□□□□ 0.22
LRCH3-206ENST00000438796 MIA2Q96PC5 1412 aa16.46■□□□□ 0.22
LRCH3-206ENST00000438796 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
LRCH3-206ENST00000438796 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
LRCH3-206ENST00000438796 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
LRCH3-206ENST00000438796 TXNDC2Q86VQ3 553 aa16.45■□□□□ 0.22
LRCH3-206ENST00000438796 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
LRCH3-206ENST00000438796 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
LRCH3-206ENST00000438796 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
LRCH3-206ENST00000438796 NUCB2P80303 420 aa16.44■□□□□ 0.22
LRCH3-206ENST00000438796 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
LRCH3-206ENST00000438796 ACBD3Q9H3P7 528 aa16.44■□□□□ 0.22
LRCH3-206ENST00000438796 ARGLU1Q9NWB6 273 aaPredicted RBP16.44■□□□□ 0.22
LRCH3-206ENST00000438796 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
LRCH3-206ENST00000438796 CDC45O75419 566 aa16.43■□□□□ 0.22
LRCH3-206ENST00000438796 SSBP05455 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
LRCH3-206ENST00000438796 MTHFSP49914 203 aa16.43■□□□□ 0.22
LRCH3-206ENST00000438796 FILIP1LQ4L180 1135 aa16.43■□□□□ 0.22
LRCH3-206ENST00000438796 MYO6Q9UM54 1294 aa16.43■□□□□ 0.22
LRCH3-206ENST00000438796 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
LRCH3-206ENST00000438796 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
LRCH3-206ENST00000438796 USP5P45974 858 aa16.42■□□□□ 0.22
LRCH3-206ENST00000438796 SEPT7Q16181 437 aaKnown RBP16.42■□□□□ 0.22
LRCH3-206ENST00000438796 SMARCE1Q969G3 411 aa16.42■□□□□ 0.22
LRCH3-206ENST00000438796 CAVIN1Q6NZI2 390 aaKnown RBP16.42■□□□□ 0.22
LRCH3-206ENST00000438796 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
LRCH3-206ENST00000438796 ZBED9Q6R2W3 1325 aa16.41■□□□□ 0.22
LRCH3-206ENST00000438796 H0YHG0 523 aa16.41■□□□□ 0.22
LRCH3-206ENST00000438796 MPNDQ8N594 471 aa16.41■□□□□ 0.22
LRCH3-206ENST00000438796 FIBPO43427 364 aa16.41■□□□□ 0.22
LRCH3-206ENST00000438796 FAM177A1Q8N128 213 aaPredicted RBP16.41■□□□□ 0.22
LRCH3-206ENST00000438796 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
LRCH3-206ENST00000438796 DEF6Q9H4E7 631 aa16.4■□□□□ 0.22
LRCH3-206ENST00000438796 ZNF76P36508 570 aa16.4■□□□□ 0.22
LRCH3-206ENST00000438796 NEBLO76041 1014 aa16.4■□□□□ 0.22
LRCH3-206ENST00000438796 NEK4P51957 841 aa16.4■□□□□ 0.22
LRCH3-206ENST00000438796 STK38Q15208 465 aa16.4■□□□□ 0.22
LRCH3-206ENST00000438796 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.226e-7■■■□□ 15
LRCH3-206ENST00000438796 PRKAR2BP31323 418 aa16.4■□□□□ 0.22
LRCH3-206ENST00000438796 ENOX2Q16206 610 aaKnown RBP16.4■□□□□ 0.22
LRCH3-206ENST00000438796 PRAM1Q96QH2 718 aa16.39■□□□□ 0.21
LRCH3-206ENST00000438796 AXDND1Q5T1B0 1012 aaPredicted RBP16.39■□□□□ 0.21
LRCH3-206ENST00000438796 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
LRCH3-206ENST00000438796 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
LRCH3-206ENST00000438796 CENPHQ9H3R5 247 aa16.39■□□□□ 0.21
LRCH3-206ENST00000438796 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
LRCH3-206ENST00000438796 SERPINC1P01008 464 aa16.38■□□□□ 0.21
LRCH3-206ENST00000438796 SSR1P43307 286 aaKnown RBP16.38■□□□□ 0.21
LRCH3-206ENST00000438796 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
LRCH3-206ENST00000438796 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
LRCH3-206ENST00000438796 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-206ENST00000438796 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
LRCH3-206ENST00000438796 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
LRCH3-206ENST00000438796 DCTN1Q14203 1278 aa16.38■□□□□ 0.21
LRCH3-206ENST00000438796 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
LRCH3-206ENST00000438796 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
LRCH3-206ENST00000438796 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
LRCH3-206ENST00000438796 GNAI2P04899 355 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 TDO2P48775 406 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
LRCH3-206ENST00000438796 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
LRCH3-206ENST00000438796 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
LRCH3-206ENST00000438796 TAX1BP1Q86VP1 789 aa16.35■□□□□ 0.21
LRCH3-206ENST00000438796 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
LRCH3-206ENST00000438796 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
LRCH3-206ENST00000438796 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
LRCH3-206ENST00000438796 TTLL12Q14166 644 aaPredicted RBP16.35■□□□□ 0.21
LRCH3-206ENST00000438796 GNAI3P08754 354 aa16.35■□□□□ 0.21
LRCH3-206ENST00000438796 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
LRCH3-206ENST00000438796 FAM193AP78312 1265 aa16.35■□□□□ 0.21
LRCH3-206ENST00000438796 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms