RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 CABP1Q9NZU7 370 aa27.6■■■□□ 2.01
SURF1-202ENST00000437995 USP21Q9UK80 565 aa27.6■■■□□ 2.01
SURF1-202ENST00000437995 ATAD2Q6PL18 1390 aa27.59■■■□□ 2.01
SURF1-202ENST00000437995 QTRT2Q9H974 415 aaKnown RBP27.58■■■□□ 2.01
SURF1-202ENST00000437995 RXRBP28702 533 aa27.57■■■□□ 2
SURF1-202ENST00000437995 BRD4O60885 1362 aaPredicted RBP27.55■■■□□ 2
SURF1-202ENST00000437995 CRYBG1Q9Y4K1 1723 aa27.55■■■□□ 2
SURF1-202ENST00000437995 ST20-MTHFSA0A0A6YYL1 179 aa27.54■■■□□ 2
SURF1-202ENST00000437995 BCL9LQ86UU0 1499 aa27.54■■■□□ 2
SURF1-202ENST00000437995 SLIT2O94813 1529 aa27.53■■■□□ 2
SURF1-202ENST00000437995 USP6P35125 1406 aa27.53■■■□□ 2
SURF1-202ENST00000437995 TRPC5Q9UL62 973 aaPredicted RBP27.53■■■□□ 2
SURF1-202ENST00000437995 USP47Q96K76 1375 aa27.52■■■□□ 2
SURF1-202ENST00000437995 RBM6P78332 1123 aaKnown RBP27.52■■■□□ 2
SURF1-202ENST00000437995 CDK12Q9NYV4 1490 aaPredicted RBP27.51■■■□□ 2
SURF1-202ENST00000437995 ATRNO75882 1429 aa27.51■■□□□ 1.99
SURF1-202ENST00000437995 TESK2Q96S53 571 aa27.51■■□□□ 1.99
SURF1-202ENST00000437995 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
SURF1-202ENST00000437995 NUTM2GQ5VZR2 741 aa27.49■■□□□ 1.99
SURF1-202ENST00000437995 ABTB2Q8N961 1025 aa27.49■■□□□ 1.99
SURF1-202ENST00000437995 PLCH1Q4KWH8 1693 aa27.49■■□□□ 1.99
SURF1-202ENST00000437995 PHRF1Q9P1Y6 1649 aaKnown RBP27.49■■□□□ 1.99
SURF1-202ENST00000437995 AKAP12Q02952 1782 aa27.48■■□□□ 1.99
SURF1-202ENST00000437995 SLC24A1O60721 1099 aa27.48■■□□□ 1.99
SURF1-202ENST00000437995 UNC5CLQ8IV45 518 aa27.47■■□□□ 1.99
SURF1-202ENST00000437995 PUS7Q96PZ0 661 aaKnown RBP27.47■■□□□ 1.99
SURF1-202ENST00000437995 ZNF692Q9BU19 519 aaPredicted RBP27.47■■□□□ 1.99
SURF1-202ENST00000437995 NWD2Q9ULI1 1742 aa27.47■■□□□ 1.99
SURF1-202ENST00000437995 FAM83GA6ND36 823 aa27.46■■□□□ 1.99
SURF1-202ENST00000437995 CPSF1Q10570 1443 aaKnown RBP27.46■■□□□ 1.99
SURF1-202ENST00000437995 SSH2Q76I76 1423 aa27.46■■□□□ 1.99
SURF1-202ENST00000437995 COL14A1Q05707 1796 aaKnown RBP27.44■■□□□ 1.98
SURF1-202ENST00000437995 NLRP13Q86W25 1043 aa27.43■■□□□ 1.98
SURF1-202ENST00000437995 USP19O94966 1318 aa27.42■■□□□ 1.98
SURF1-202ENST00000437995 RGS12O14924 1447 aa27.42■■□□□ 1.98
SURF1-202ENST00000437995 TMC1Q8TDI8 760 aa27.42■■□□□ 1.98
SURF1-202ENST00000437995 NRKQ7Z2Y5 1582 aa27.41■■□□□ 1.98
SURF1-202ENST00000437995 KTN1Q86UP2 1357 aaKnown RBP27.41■■□□□ 1.98
SURF1-202ENST00000437995 PRDM11Q9NQV5 511 aa27.41■■□□□ 1.98
SURF1-202ENST00000437995 GJD4Q96KN9 370 aaPredicted RBP27.4■■□□□ 1.98
SURF1-202ENST00000437995 MON2Q7Z3U7 1717 aa27.4■■□□□ 1.98
SURF1-202ENST00000437995 TTC21BQ7Z4L5 1316 aa27.4■■□□□ 1.98
SURF1-202ENST00000437995 PIK3C2AO00443 1686 aa27.4■■□□□ 1.98
SURF1-202ENST00000437995 CD163L1Q9NR16 1453 aa27.39■■□□□ 1.98
SURF1-202ENST00000437995 KIAA0232Q92628 1395 aa27.39■■□□□ 1.98
SURF1-202ENST00000437995 TTC21AQ8NDW8 1320 aa27.39■■□□□ 1.97
SURF1-202ENST00000437995 NRAPQ86VF7 1730 aa27.38■■□□□ 1.97
SURF1-202ENST00000437995 NLRP6P59044 892 aa27.38■■□□□ 1.97
SURF1-202ENST00000437995 TMF1P82094 1093 aa27.38■■□□□ 1.97
SURF1-202ENST00000437995 SLC12A5Q9H2X9 1139 aa27.38■■□□□ 1.97
SURF1-202ENST00000437995 VPS72Q15906 364 aa27.37■■□□□ 1.97
SURF1-202ENST00000437995 BTG4Q9NY30 223 aa27.37■■□□□ 1.97
SURF1-202ENST00000437995 NINLQ9Y2I6 1382 aa27.36■■□□□ 1.97
SURF1-202ENST00000437995 ZC3H6P61129 1189 aaKnown RBP27.36■■□□□ 1.97
SURF1-202ENST00000437995 HDGFL2Q7Z4V5 671 aaPredicted RBP27.36■■□□□ 1.97
SURF1-202ENST00000437995 GLI3P10071 1580 aa27.35■■□□□ 1.97
SURF1-202ENST00000437995 TERF2IPQ9NYB0 399 aa27.35■■□□□ 1.97
SURF1-202ENST00000437995 GCP02774 474 aa27.34■■□□□ 1.97
SURF1-202ENST00000437995 SLIT3O75094 1523 aa27.34■■□□□ 1.97
SURF1-202ENST00000437995 CPDO75976 1380 aa27.34■■□□□ 1.97
SURF1-202ENST00000437995 CHRNA2Q15822 529 aa27.33■■□□□ 1.97
SURF1-202ENST00000437995 CCDC9Q9Y3X0 531 aaKnown RBP27.32■■□□□ 1.96
SURF1-202ENST00000437995 A0A1W2PP64 1363 aa27.32■■□□□ 1.96
SURF1-202ENST00000437995 CDCA8Q53HL2 280 aa27.3■■□□□ 1.96
SURF1-202ENST00000437995 EDC4Q6P2E9 1401 aaKnown RBP27.3■■□□□ 1.96
SURF1-202ENST00000437995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.29■■□□□ 1.96
SURF1-202ENST00000437995 LMO7Q8WWI1 1683 aa27.27■■□□□ 1.96
SURF1-202ENST00000437995 USP31Q70CQ4 1352 aa27.25■■□□□ 1.95
SURF1-202ENST00000437995 EIF4G2P78344 907 aaKnown RBP eCLIP27.25■■□□□ 1.95
SURF1-202ENST00000437995 USP54Q70EL1 1684 aa27.24■■□□□ 1.95
SURF1-202ENST00000437995 NME9Q86XW9 330 aa27.24■■□□□ 1.95
SURF1-202ENST00000437995 KCNH5Q8NCM2 988 aa27.24■■□□□ 1.95
SURF1-202ENST00000437995 CAMTA1Q9Y6Y1 1673 aa27.24■■□□□ 1.95
SURF1-202ENST00000437995 ANKRD36BQ8N2N9 1353 aa27.23■■□□□ 1.95
SURF1-202ENST00000437995 SPATA31A5Q5VU36 1347 aa27.22■■□□□ 1.95
SURF1-202ENST00000437995 SPATA31A7Q8IWB4 1347 aa27.22■■□□□ 1.95
SURF1-202ENST00000437995 STRN4Q9NRL3 753 aa27.22■■□□□ 1.95
SURF1-202ENST00000437995 ZRANB1Q9UGI0 708 aa27.22■■□□□ 1.95
SURF1-202ENST00000437995 ZBTB7CA1YPR0 619 aa27.21■■□□□ 1.95
SURF1-202ENST00000437995 HSPA5P11021 654 aaKnown RBP27.21■■□□□ 1.95
SURF1-202ENST00000437995 UPF1Q92900 1129 aaKnown RBP eCLIP27.21■■□□□ 1.95
SURF1-202ENST00000437995 AATKQ6ZMQ8 1374 aa27.21■■□□□ 1.95
SURF1-202ENST00000437995 ONECUT3O60422 494 aaPredicted RBP27.2■■□□□ 1.94
SURF1-202ENST00000437995 EVA1CP58658 441 aa27.2■■□□□ 1.94
SURF1-202ENST00000437995 SEPT12Q8IYM1 358 aa27.2■■□□□ 1.94
SURF1-202ENST00000437995 NFAT5O94916 1531 aa27.2■■□□□ 1.94
SURF1-202ENST00000437995 SOX12O15370 315 aa27.19■■□□□ 1.94
SURF1-202ENST00000437995 ARHGEF25Q86VW2 580 aa27.18■■□□□ 1.94
SURF1-202ENST00000437995 MYOM1P52179 1685 aa27.17■■□□□ 1.94
SURF1-202ENST00000437995 FAM98CQ17RN3 349 aaKnown RBP27.17■■□□□ 1.94
SURF1-202ENST00000437995 COL5A2P05997 1499 aaPredicted RBP27.17■■□□□ 1.94
SURF1-202ENST00000437995 COL18A1P39060 1754 aa27.17■■□□□ 1.94
SURF1-202ENST00000437995 SPATA31A1Q5TZJ5 1347 aa27.16■■□□□ 1.94
SURF1-202ENST00000437995 BRWD3Q6RI45 1802 aa27.16■■□□□ 1.94
SURF1-202ENST00000437995 OVOS2A0A0J9YW53 1432 aa27.16■■□□□ 1.94
SURF1-202ENST00000437995 OVOS2Q6IE36 1432 aa27.16■■□□□ 1.94
SURF1-202ENST00000437995 A0A0G2JS52 829 aa27.14■■□□□ 1.94
SURF1-202ENST00000437995 MYT1Q01538 1121 aa27.14■■□□□ 1.94
SURF1-202ENST00000437995 LARP1Q6PKG0 1096 aaKnown RBP27.14■■□□□ 1.94
SURF1-202ENST00000437995 THSD7AQ9UPZ6 1657 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms