RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
LINC00242-201ENST00000437615 NME9Q86XW9 330 aa16.25■□□□□ 0.19
LINC00242-201ENST00000437615 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
LINC00242-201ENST00000437615 DIAPH1O60610 1272 aaKnown RBP16.24■□□□□ 0.19
LINC00242-201ENST00000437615 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
LINC00242-201ENST00000437615 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
LINC00242-201ENST00000437615 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
LINC00242-201ENST00000437615 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
LINC00242-201ENST00000437615 CCDC27Q2M243 656 aa16.21■□□□□ 0.19
LINC00242-201ENST00000437615 COG3Q96JB2 828 aa16.21■□□□□ 0.19
LINC00242-201ENST00000437615 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
LINC00242-201ENST00000437615 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
LINC00242-201ENST00000437615 PLEKHF1Q96S99 279 aa16.21■□□□□ 0.19
LINC00242-201ENST00000437615 NKTRP30414 1462 aaKnown RBP16.2■□□□□ 0.18
LINC00242-201ENST00000437615 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
LINC00242-201ENST00000437615 ACEP12821 1306 aa16.19■□□□□ 0.18
LINC00242-201ENST00000437615 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
LINC00242-201ENST00000437615 COL3A1P02461 1466 aaPredicted RBP16.19■□□□□ 0.18
LINC00242-201ENST00000437615 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
LINC00242-201ENST00000437615 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
LINC00242-201ENST00000437615 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
LINC00242-201ENST00000437615 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
LINC00242-201ENST00000437615 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
LINC00242-201ENST00000437615 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
LINC00242-201ENST00000437615 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
LINC00242-201ENST00000437615 CDC42BPGQ6DT37 1551 aa16.18■□□□□ 0.18
LINC00242-201ENST00000437615 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
LINC00242-201ENST00000437615 MAPK8IP3Q9UPT6 1336 aa16.18■□□□□ 0.18
LINC00242-201ENST00000437615 KCNA6P17658 529 aa16.18■□□□□ 0.18
LINC00242-201ENST00000437615 PNNQ9H307 717 aaKnown RBP16.18■□□□□ 0.18
LINC00242-201ENST00000437615 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
LINC00242-201ENST00000437615 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
LINC00242-201ENST00000437615 BCAR3O75815 825 aa16.16■□□□□ 0.18
LINC00242-201ENST00000437615 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
LINC00242-201ENST00000437615 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
LINC00242-201ENST00000437615 CEP170BQ9Y4F5 1589 aaPredicted RBP16.16■□□□□ 0.18
LINC00242-201ENST00000437615 PTCH1Q13635 1447 aa16.16■□□□□ 0.18
LINC00242-201ENST00000437615 FCHSD2O94868 740 aa16.16■□□□□ 0.18
LINC00242-201ENST00000437615 RIMS1Q86UR5 1692 aaKnown RBP16.16■□□□□ 0.18
LINC00242-201ENST00000437615 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
LINC00242-201ENST00000437615 PMFBP1Q8TBY8 1022 aa16.15■□□□□ 0.18
LINC00242-201ENST00000437615 ADGRB2O60241 1585 aa16.15■□□□□ 0.18
LINC00242-201ENST00000437615 AATKQ6ZMQ8 1374 aa16.15■□□□□ 0.18
LINC00242-201ENST00000437615 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
LINC00242-201ENST00000437615 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
LINC00242-201ENST00000437615 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
LINC00242-201ENST00000437615 RIPK4P57078 832 aa16.13■□□□□ 0.17
LINC00242-201ENST00000437615 IL13P35225 146 aa16.13■□□□□ 0.17
LINC00242-201ENST00000437615 NGDNQ8NEJ9 315 aaKnown RBP16.13■□□□□ 0.17
LINC00242-201ENST00000437615 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
LINC00242-201ENST00000437615 NEFMP07197 916 aa16.12■□□□□ 0.17
LINC00242-201ENST00000437615 HMOX1P09601 288 aa16.11■□□□□ 0.17
LINC00242-201ENST00000437615 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
LINC00242-201ENST00000437615 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
LINC00242-201ENST00000437615 USP6P35125 1406 aa16.11■□□□□ 0.17
LINC00242-201ENST00000437615 MON2Q7Z3U7 1717 aa16.1■□□□□ 0.17
LINC00242-201ENST00000437615 ADAMTSL3P82987 1691 aa16.09■□□□□ 0.17
LINC00242-201ENST00000437615 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.17
LINC00242-201ENST00000437615 PHACTR3Q96KR7 559 aa16.08■□□□□ 0.16
LINC00242-201ENST00000437615 AKAP12Q02952 1782 aa16.08■□□□□ 0.16
LINC00242-201ENST00000437615 MAP2P11137 1827 aaKnown RBP16.07■□□□□ 0.16
LINC00242-201ENST00000437615 CANXP27824 592 aaKnown RBP16.07■□□□□ 0.16
LINC00242-201ENST00000437615 TSR2Q969E8 191 aaKnown RBP16.07■□□□□ 0.16
LINC00242-201ENST00000437615 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
LINC00242-201ENST00000437615 ITSN1Q15811 1721 aa16.07■□□□□ 0.16
LINC00242-201ENST00000437615 CDK12Q9NYV4 1490 aaPredicted RBP16.07■□□□□ 0.16
LINC00242-201ENST00000437615 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
LINC00242-201ENST00000437615 SOX12O15370 315 aa16.06■□□□□ 0.16
LINC00242-201ENST00000437615 FRAT1Q92837 279 aaPredicted RBP16.06■□□□□ 0.16
LINC00242-201ENST00000437615 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
LINC00242-201ENST00000437615 XRN1Q8IZH2 1706 aaKnown RBP16.05■□□□□ 0.16
LINC00242-201ENST00000437615 IL16Q14005 1332 aa16.05■□□□□ 0.16
LINC00242-201ENST00000437615 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
LINC00242-201ENST00000437615 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
LINC00242-201ENST00000437615 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
LINC00242-201ENST00000437615 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
LINC00242-201ENST00000437615 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
LINC00242-201ENST00000437615 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
LINC00242-201ENST00000437615 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
LINC00242-201ENST00000437615 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
LINC00242-201ENST00000437615 BCL2L13Q9BXK5 485 aa16.04■□□□□ 0.16
LINC00242-201ENST00000437615 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
LINC00242-201ENST00000437615 ANKARQ7Z5J8 1434 aa16.03■□□□□ 0.16
LINC00242-201ENST00000437615 HSP90AB2PQ58FF8 381 aa16.03■□□□□ 0.16
LINC00242-201ENST00000437615 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
LINC00242-201ENST00000437615 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.16
LINC00242-201ENST00000437615 LRRC7Q96NW7 1537 aa16.02■□□□□ 0.15
LINC00242-201ENST00000437615 NLRP6P59044 892 aa16.02■□□□□ 0.15
LINC00242-201ENST00000437615 PANK1Q8TE04 598 aa16.02■□□□□ 0.15
LINC00242-201ENST00000437615 NPHP4O75161 1426 aaPredicted RBP16.01■□□□□ 0.15
LINC00242-201ENST00000437615 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
LINC00242-201ENST00000437615 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
LINC00242-201ENST00000437615 COG6Q9Y2V7 657 aa16■□□□□ 0.15
LINC00242-201ENST00000437615 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
LINC00242-201ENST00000437615 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
LINC00242-201ENST00000437615 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
LINC00242-201ENST00000437615 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
LINC00242-201ENST00000437615 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
LINC00242-201ENST00000437615 MAP3K19Q56UN5 1328 aa15.99■□□□□ 0.15
LINC00242-201ENST00000437615 NUTM2GQ5VZR2 741 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms