RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 TTC21AQ8NDW8 1320 aa20.26■□□□□ 0.83
SKA2-202ENST00000437036 ARHGEF10O15013 1369 aa20.25■□□□□ 0.83
SKA2-202ENST00000437036 TNS3Q68CZ2 1445 aa20.25■□□□□ 0.83
SKA2-202ENST00000437036 TTC21BQ7Z4L5 1316 aa20.25■□□□□ 0.83
SKA2-202ENST00000437036 JCADQ9P266 1359 aa20.24■□□□□ 0.83
SKA2-202ENST00000437036 MYOM1P52179 1685 aa20.24■□□□□ 0.83
SKA2-202ENST00000437036 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
SKA2-202ENST00000437036 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
SKA2-202ENST00000437036 AKAP12Q02952 1782 aa20.23■□□□□ 0.83
SKA2-202ENST00000437036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
SKA2-202ENST00000437036 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
SKA2-202ENST00000437036 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
SKA2-202ENST00000437036 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
SKA2-202ENST00000437036 KNSTRNQ9Y448 316 aa20.21■□□□□ 0.83
SKA2-202ENST00000437036 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
SKA2-202ENST00000437036 MON2Q7Z3U7 1717 aa20.2■□□□□ 0.82
SKA2-202ENST00000437036 NLRP13Q86W25 1043 aa20.2■□□□□ 0.82
SKA2-202ENST00000437036 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
SKA2-202ENST00000437036 NLRP6P59044 892 aa20.19■□□□□ 0.82
SKA2-202ENST00000437036 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
SKA2-202ENST00000437036 PNPLA6Q8IY17 1366 aa20.19■□□□□ 0.82
SKA2-202ENST00000437036 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
SKA2-202ENST00000437036 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
SKA2-202ENST00000437036 NME9Q86XW9 330 aa20.17■□□□□ 0.82
SKA2-202ENST00000437036 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
SKA2-202ENST00000437036 SPATA31A6Q5VVP1 1343 aa20.16■□□□□ 0.82
SKA2-202ENST00000437036 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
SKA2-202ENST00000437036 COG3Q96JB2 828 aa20.15■□□□□ 0.82
SKA2-202ENST00000437036 NRKQ7Z2Y5 1582 aa20.15■□□□□ 0.82
SKA2-202ENST00000437036 ALS2Q96Q42 1657 aa20.14■□□□□ 0.81
SKA2-202ENST00000437036 USP31Q70CQ4 1352 aa20.14■□□□□ 0.81
SKA2-202ENST00000437036 FYB1O15117 783 aa20.14■□□□□ 0.81
SKA2-202ENST00000437036 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
SKA2-202ENST00000437036 NUTM2BA6NNL0 878 aaPredicted RBP20.12■□□□□ 0.81
SKA2-202ENST00000437036 NUTM2EB1AL46 878 aaPredicted RBP20.12■□□□□ 0.81
SKA2-202ENST00000437036 PER1O15534 1290 aaPredicted RBP20.12■□□□□ 0.81
SKA2-202ENST00000437036 NUTM2AQ8IVF1 878 aaPredicted RBP20.12■□□□□ 0.81
SKA2-202ENST00000437036 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
SKA2-202ENST00000437036 NSD2O96028 1365 aa20.11■□□□□ 0.81
SKA2-202ENST00000437036 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
SKA2-202ENST00000437036 CABLES1Q8TDN4 633 aa20.11■□□□□ 0.81
SKA2-202ENST00000437036 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
SKA2-202ENST00000437036 USP19O94966 1318 aa20.1■□□□□ 0.81
SKA2-202ENST00000437036 PIK3C2AO00443 1686 aa20.1■□□□□ 0.81
SKA2-202ENST00000437036 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
SKA2-202ENST00000437036 MED1Q15648 1581 aaPredicted RBP20.08■□□□□ 0.81
SKA2-202ENST00000437036 GCP02774 474 aa20.08■□□□□ 0.81
SKA2-202ENST00000437036 AMER1Q5JTC6 1135 aaPredicted RBP20.08■□□□□ 0.81
SKA2-202ENST00000437036 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
SKA2-202ENST00000437036 OVOS2A0A0J9YW53 1432 aa20.07■□□□□ 0.8
SKA2-202ENST00000437036 OVOS2Q6IE36 1432 aa20.07■□□□□ 0.8
SKA2-202ENST00000437036 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
SKA2-202ENST00000437036 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
SKA2-202ENST00000437036 SOX12O15370 315 aa20.05■□□□□ 0.8
SKA2-202ENST00000437036 ADAMTS2O95450 1211 aa20.05■□□□□ 0.8
SKA2-202ENST00000437036 KIF20BQ96Q89 1820 aa20.04■□□□□ 0.8
SKA2-202ENST00000437036 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
SKA2-202ENST00000437036 SLIT3O75094 1523 aa20.03■□□□□ 0.8
SKA2-202ENST00000437036 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
SKA2-202ENST00000437036 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
SKA2-202ENST00000437036 PRDM11Q9NQV5 511 aa20.02■□□□□ 0.8
SKA2-202ENST00000437036 USP54Q70EL1 1684 aa20.01■□□□□ 0.79
SKA2-202ENST00000437036 CPDO75976 1380 aa20■□□□□ 0.79
SKA2-202ENST00000437036 ZBTB7CA1YPR0 619 aa20■□□□□ 0.79
SKA2-202ENST00000437036 PHRF1Q9P1Y6 1649 aaKnown RBP20■□□□□ 0.79
SKA2-202ENST00000437036 KIAA0232Q92628 1395 aa19.99■□□□□ 0.79
SKA2-202ENST00000437036 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
SKA2-202ENST00000437036 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
SKA2-202ENST00000437036 LRP6O75581 1613 aa19.98■□□□□ 0.79
SKA2-202ENST00000437036 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
SKA2-202ENST00000437036 C8orf37Q96NL8 207 aa19.98■□□□□ 0.79
SKA2-202ENST00000437036 ABCA3Q99758 1704 aa19.98■□□□□ 0.79
SKA2-202ENST00000437036 CRYBG1Q9Y4K1 1723 aa19.97■□□□□ 0.79
SKA2-202ENST00000437036 AATKQ6ZMQ8 1374 aa19.96■□□□□ 0.79
SKA2-202ENST00000437036 MARF1Q9Y4F3 1742 aaKnown RBP19.96■□□□□ 0.79
SKA2-202ENST00000437036 FAM83GA6ND36 823 aa19.96■□□□□ 0.79
SKA2-202ENST00000437036 NFAT5O94916 1531 aa19.96■□□□□ 0.79
SKA2-202ENST00000437036 ANKRD26Q9UPS8 1709 aa19.96■□□□□ 0.79
SKA2-202ENST00000437036 AMPHP49418 695 aa19.95■□□□□ 0.78
SKA2-202ENST00000437036 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
SKA2-202ENST00000437036 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
SKA2-202ENST00000437036 RALBP1Q15311 655 aa19.94■□□□□ 0.78
SKA2-202ENST00000437036 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
SKA2-202ENST00000437036 FBLN1P23142 703 aa19.93■□□□□ 0.78
SKA2-202ENST00000437036 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
SKA2-202ENST00000437036 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
SKA2-202ENST00000437036 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
SKA2-202ENST00000437036 FNBP4Q8N3X1 1017 aaPredicted RBP19.91■□□□□ 0.78
SKA2-202ENST00000437036 IP6K1Q92551 441 aa19.91■□□□□ 0.78
SKA2-202ENST00000437036 BTG4Q9NY30 223 aa19.91■□□□□ 0.78
SKA2-202ENST00000437036 POLKQ9UBT6 870 aa19.91■□□□□ 0.78
SKA2-202ENST00000437036 COL14A1Q05707 1796 aaKnown RBP19.9■□□□□ 0.78
SKA2-202ENST00000437036 ANP32CO43423 234 aa19.9■□□□□ 0.78
SKA2-202ENST00000437036 EVA1CP58658 441 aa19.9■□□□□ 0.78
SKA2-202ENST00000437036 AFF2P51816 1311 aa19.9■□□□□ 0.78
SKA2-202ENST00000437036 RTL1A6NKG5 1358 aa19.9■□□□□ 0.78
SKA2-202ENST00000437036 PARD3Q8TEW0 1356 aa19.89■□□□□ 0.77
SKA2-202ENST00000437036 USP21Q9UK80 565 aa19.89■□□□□ 0.77
SKA2-202ENST00000437036 EMILIN1Q9Y6C2 1016 aa19.89■□□□□ 0.77
SKA2-202ENST00000437036 ABCC6O95255 1503 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms