RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
PNKDP1-201ENST00000435914 LMOD2Q6P5Q4 547 aa9.02□□□□□ -0.97
PNKDP1-201ENST00000435914 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
PNKDP1-201ENST00000435914 THSD7AQ9UPZ6 1657 aa9.01□□□□□ -0.97
PNKDP1-201ENST00000435914 PLEKHG3A1L390 1219 aa9.01□□□□□ -0.97
PNKDP1-201ENST00000435914 HAP1P54257 671 aaPredicted RBP9.01□□□□□ -0.97
PNKDP1-201ENST00000435914 CDK19Q9BWU1 502 aa9.01□□□□□ -0.97
PNKDP1-201ENST00000435914 PLEKHG5O94827 1062 aa9□□□□□ -0.97
PNKDP1-201ENST00000435914 NGDNQ8NEJ9 315 aaKnown RBP9□□□□□ -0.97
PNKDP1-201ENST00000435914 BTG4Q9NY30 223 aa9□□□□□ -0.97
PNKDP1-201ENST00000435914 CCDC61Q9Y6R9 512 aa9□□□□□ -0.97
PNKDP1-201ENST00000435914 NRKQ7Z2Y5 1582 aa8.99□□□□□ -0.97
PNKDP1-201ENST00000435914 NBPF8Q3BBV2 869 aa8.99□□□□□ -0.97
PNKDP1-201ENST00000435914 ACEP12821 1306 aa8.99□□□□□ -0.97
PNKDP1-201ENST00000435914 SPATA31A5Q5VU36 1347 aa8.99□□□□□ -0.97
PNKDP1-201ENST00000435914 SPATA31A7Q8IWB4 1347 aa8.99□□□□□ -0.97
PNKDP1-201ENST00000435914 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
PNKDP1-201ENST00000435914 TRPM1Q7Z4N2 1603 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 LMO7Q8WWI1 1683 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 QRICH2Q9H0J4 1663 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 KRT27Q7Z3Y8 459 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 DEFB132Q7Z7B7 95 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 L3MBTL2Q969R5 705 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 USP19O94966 1318 aa8.98□□□□□ -0.97
PNKDP1-201ENST00000435914 PAK3O75914 559 aaPredicted RBP8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 FAM98CQ17RN3 349 aaKnown RBP8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 SPATA31A1Q5TZJ5 1347 aa8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 CENPJQ9HC77 1338 aaPredicted RBP8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 CAMTA1Q9Y6Y1 1673 aa8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 CPDO75976 1380 aa8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 SSH2Q76I76 1423 aa8.97□□□□□ -0.97
PNKDP1-201ENST00000435914 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.98
PNKDP1-201ENST00000435914 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
PNKDP1-201ENST00000435914 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
PNKDP1-201ENST00000435914 TNS1Q9HBL0 1735 aaKnown RBP8.96□□□□□ -0.98
PNKDP1-201ENST00000435914 PPIP5K1Q6PFW1 1433 aa8.96□□□□□ -0.98
PNKDP1-201ENST00000435914 RGPD1P0DJD0 1748 aa8.95□□□□□ -0.98
PNKDP1-201ENST00000435914 CHRNA2Q15822 529 aa8.95□□□□□ -0.98
PNKDP1-201ENST00000435914 SIN3AQ96ST3 1273 aa8.95□□□□□ -0.98
PNKDP1-201ENST00000435914 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
PNKDP1-201ENST00000435914 DISP2A7MBM2 1401 aa8.95□□□□□ -0.98
PNKDP1-201ENST00000435914 ZC3H6P61129 1189 aaKnown RBP8.94□□□□□ -0.98
PNKDP1-201ENST00000435914 NUTM2GQ5VZR2 741 aa8.94□□□□□ -0.98
PNKDP1-201ENST00000435914 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
PNKDP1-201ENST00000435914 USP6P35125 1406 aa8.94□□□□□ -0.98
PNKDP1-201ENST00000435914 SLIT3O75094 1523 aa8.94□□□□□ -0.98
PNKDP1-201ENST00000435914 PIK3C2AO00443 1686 aa8.94□□□□□ -0.98
PNKDP1-201ENST00000435914 FAM182BQ5T319 152 aa8.93□□□□□ -0.98
PNKDP1-201ENST00000435914 ABTB2Q8N961 1025 aa8.93□□□□□ -0.98
PNKDP1-201ENST00000435914 COL18A1P39060 1754 aa8.93□□□□□ -0.98
PNKDP1-201ENST00000435914 AKAP12Q02952 1782 aa8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 LRP5O75197 1615 aa8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 COL5A2P05997 1499 aaPredicted RBP8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 GCP02774 474 aa8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 CABP1Q9NZU7 370 aa8.92□□□□□ -0.98
PNKDP1-201ENST00000435914 PARP4Q9UKK3 1724 aaKnown RBP8.91□□□□□ -0.98
PNKDP1-201ENST00000435914 SF3B2Q13435 895 aaKnown RBP8.91□□□□□ -0.98
PNKDP1-201ENST00000435914 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
PNKDP1-201ENST00000435914 NLRP13Q86W25 1043 aa8.91□□□□□ -0.98
PNKDP1-201ENST00000435914 STRN4Q9NRL3 753 aa8.91□□□□□ -0.98
PNKDP1-201ENST00000435914 CPSF1Q10570 1443 aaKnown RBP8.9□□□□□ -0.98
PNKDP1-201ENST00000435914 SBNO2Q9Y2G9 1366 aa8.9□□□□□ -0.98
PNKDP1-201ENST00000435914 A0A0G2JS52 829 aa8.9□□□□□ -0.98
PNKDP1-201ENST00000435914 BAG6P46379 1132 aa8.9□□□□□ -0.98
PNKDP1-201ENST00000435914 MYT1Q01538 1121 aa8.9□□□□□ -0.98
PNKDP1-201ENST00000435914 PEAK1Q9H792 1746 aa8.9□□□□□ -0.98
PNKDP1-201ENST00000435914 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 AATKQ6ZMQ8 1374 aa8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 EVC2Q86UK5 1308 aa8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 RREB1Q92766 1687 aa8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 EN1Q05925 392 aaPredicted RBP8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 TCP11L2Q8N4U5 519 aa8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 CAMKK2Q96RR4 588 aa8.89□□□□□ -0.99
PNKDP1-201ENST00000435914 MON2Q7Z3U7 1717 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 USP54Q70EL1 1684 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 NLRP6P59044 892 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 FAM196AQ6ZSG2 479 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 THRAP3Q9Y2W1 955 aaKnown RBP8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 WNK3Q9BYP7 1800 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 NFAT5O94916 1531 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 CD163L1Q9NR16 1453 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 CRB1P82279 1406 aa8.88□□□□□ -0.99
PNKDP1-201ENST00000435914 LRRC37A3O60309 1634 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 RGPD5Q99666 1765 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 EVA1CP58658 441 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 NEUROD1Q13562 356 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 EZH2Q15910 746 aaKnown RBP8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 USP35Q9P2H5 1018 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 AXIN2Q9Y2T1 843 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 SBF2Q86WG5 1849 aa8.87□□□□□ -0.99
PNKDP1-201ENST00000435914 PARD3Q8TEW0 1356 aa8.86□□□□□ -0.99
PNKDP1-201ENST00000435914 NUP188Q5SRE5 1749 aa8.86□□□□□ -0.99
PNKDP1-201ENST00000435914 PSDA5PKW4 1024 aaPredicted RBP8.86□□□□□ -0.99
PNKDP1-201ENST00000435914 TRIM37O94972 964 aa8.86□□□□□ -0.99
PNKDP1-201ENST00000435914 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
PNKDP1-201ENST00000435914 ZNF692Q9BU19 519 aaPredicted RBP8.86□□□□□ -0.99
PNKDP1-201ENST00000435914 USP31Q70CQ4 1352 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms