RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
GTF3C3-204ENST00000435252 TRIM32Q13049 653 aa9.65□□□□□ -0.86
GTF3C3-204ENST00000435252 WNT7BP56706 349 aa9.64□□□□□ -0.87
GTF3C3-204ENST00000435252 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
GTF3C3-204ENST00000435252 PLA2G2CQ5R387 149 aa9.63□□□□□ -0.87
GTF3C3-204ENST00000435252 PTCRAQ6ISU1 281 aaPredicted RBP9.63□□□□□ -0.87
GTF3C3-204ENST00000435252 PRKD2Q9BZL6 878 aa9.63□□□□□ -0.87
GTF3C3-204ENST00000435252 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
GTF3C3-204ENST00000435252 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
GTF3C3-204ENST00000435252 ZNF592Q92610 1267 aa9.62□□□□□ -0.87
GTF3C3-204ENST00000435252 ZNF330Q9Y3S2 320 aaPredicted RBP9.62□□□□□ -0.87
GTF3C3-204ENST00000435252 GPSM3Q9Y4H4 160 aa9.62□□□□□ -0.87
GTF3C3-204ENST00000435252 ABL2P42684 1182 aa9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 PTK2Q05397 1052 aa9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 AGERQ15109 404 aa9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 BPHLQ86WA6 291 aaPredicted RBP9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 ZNF511Q8NB15 262 aa9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 TBC1D2BQ9UPU7 963 aa9.61□□□□□ -0.87
GTF3C3-204ENST00000435252 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
GTF3C3-204ENST00000435252 BAP1Q92560 729 aa9.6□□□□□ -0.87
GTF3C3-204ENST00000435252 GDPD2Q9HCC8 539 aa9.6□□□□□ -0.87
GTF3C3-204ENST00000435252 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
GTF3C3-204ENST00000435252 WASHC4Q2M389 1173 aa9.59□□□□□ -0.87
GTF3C3-204ENST00000435252 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
GTF3C3-204ENST00000435252 SPRYD7Q5W111 196 aa9.59□□□□□ -0.87
GTF3C3-204ENST00000435252 ZNF697Q5TEC3 545 aa9.58□□□□□ -0.88
GTF3C3-204ENST00000435252 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
GTF3C3-204ENST00000435252 ARHGAP9Q9BRR9 750 aa9.58□□□□□ -0.88
GTF3C3-204ENST00000435252 SH3BP2P78314 561 aa9.57□□□□□ -0.88
GTF3C3-204ENST00000435252 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
GTF3C3-204ENST00000435252 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
GTF3C3-204ENST00000435252 A6NJR5 290 aa9.56□□□□□ -0.88
GTF3C3-204ENST00000435252 ZBBXA8MT70 800 aa9.56□□□□□ -0.88
GTF3C3-204ENST00000435252 VARSP26640 1264 aaKnown RBP9.56□□□□□ -0.88
GTF3C3-204ENST00000435252 LAPTM4AQ15012 233 aa9.56□□□□□ -0.88
GTF3C3-204ENST00000435252 MAGEB6P1A0A0J9YX57 407 aa9.55□□□□□ -0.88
GTF3C3-204ENST00000435252 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
GTF3C3-204ENST00000435252 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
GTF3C3-204ENST00000435252 WNT7AO00755 349 aa9.54□□□□□ -0.88
GTF3C3-204ENST00000435252 NR1H3Q13133 447 aa9.54□□□□□ -0.88
GTF3C3-204ENST00000435252 FAM174AQ8TBP5 190 aa9.54□□□□□ -0.88
GTF3C3-204ENST00000435252 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
GTF3C3-204ENST00000435252 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 RC3H1Q5TC82 1133 aaKnown RBP9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 EMID1Q96A84 441 aaPredicted RBP9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 SLC10A4Q96EP9 437 aa9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 POM121Q96HA1 1249 aa9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 CARD14Q9BXL6 1004 aa9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 CDV3Q9UKY7 258 aaKnown RBP9.53□□□□□ -0.88
GTF3C3-204ENST00000435252 SOX11P35716 441 aa9.52□□□□□ -0.89
GTF3C3-204ENST00000435252 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
GTF3C3-204ENST00000435252 SKOR1P84550 965 aa9.52□□□□□ -0.89
GTF3C3-204ENST00000435252 SH3RF1Q7Z6J0 888 aa9.52□□□□□ -0.89
GTF3C3-204ENST00000435252 FOXJ1Q92949 421 aa9.52□□□□□ -0.89
GTF3C3-204ENST00000435252 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
GTF3C3-204ENST00000435252 FOXC1Q12948 553 aa9.5□□□□□ -0.89
GTF3C3-204ENST00000435252 GPR37L1O60883 481 aa9.49□□□□□ -0.89
GTF3C3-204ENST00000435252 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
GTF3C3-204ENST00000435252 ADAM32Q8TC27 787 aa9.49□□□□□ -0.89
GTF3C3-204ENST00000435252 IRF5Q13568 498 aa9.48□□□□□ -0.89
GTF3C3-204ENST00000435252 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
GTF3C3-204ENST00000435252 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-204ENST00000435252 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-204ENST00000435252 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
GTF3C3-204ENST00000435252 C1QTNF2Q9BXJ5 285 aa9.48□□□□□ -0.89
GTF3C3-204ENST00000435252 PRR20EP86478 221 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 PRR20CP86479 221 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 PRR20DP86480 221 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 PRR20BP86481 221 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 PRR20AP86496 221 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 VAC14Q08AM6 782 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 CYP4X1Q8N118 509 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 MPNDQ8N594 471 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 TRIM52Q96A61 297 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 PCDHB9Q9Y5E1 797 aa9.47□□□□□ -0.89
GTF3C3-204ENST00000435252 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
GTF3C3-204ENST00000435252 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
GTF3C3-204ENST00000435252 SNIP1Q8TAD8 396 aaKnown RBP9.46□□□□□ -0.9
GTF3C3-204ENST00000435252 MAP4K5Q9Y4K4 846 aa9.46□□□□□ -0.9
GTF3C3-204ENST00000435252 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
GTF3C3-204ENST00000435252 VASH1Q7L8A9 365 aaPredicted RBP9.45□□□□□ -0.9
GTF3C3-204ENST00000435252 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 TRAK2O60296 914 aa9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 GDF9O60383 454 aa9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 FNBP4Q8N3X1 1017 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 PDZRN3Q9UPQ7 1066 aa9.44□□□□□ -0.9
GTF3C3-204ENST00000435252 TNFRSF10AO00220 468 aa9.43□□□□□ -0.9
GTF3C3-204ENST00000435252 CCDC125Q86Z20 511 aa9.43□□□□□ -0.9
GTF3C3-204ENST00000435252 OCSTAMPQ9BR26 566 aa9.43□□□□□ -0.9
GTF3C3-204ENST00000435252 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
GTF3C3-204ENST00000435252 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
GTF3C3-204ENST00000435252 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
GTF3C3-204ENST00000435252 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
GTF3C3-204ENST00000435252 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
GTF3C3-204ENST00000435252 TLL2Q9Y6L7 1015 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms