RNA–Protein interactions for RNA: ENST00000435061.1

SREBF2-203, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 3

Gene SREBF2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-203ENST00000435061 CCDC125Q86Z20 511 aa24.84■■□□□ 1.57
SREBF2-203ENST00000435061 ONECUT3O60422 494 aaPredicted RBP24.83■■□□□ 1.57
SREBF2-203ENST00000435061 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
SREBF2-203ENST00000435061 CCDC9Q9Y3X0 531 aaKnown RBP24.83■■□□□ 1.57
SREBF2-203ENST00000435061 ACEP12821 1306 aa24.83■■□□□ 1.56
SREBF2-203ENST00000435061 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
SREBF2-203ENST00000435061 PLCH1Q4KWH8 1693 aa24.81■■□□□ 1.56
SREBF2-203ENST00000435061 SRPK2P78362 688 aaKnown RBP24.81■■□□□ 1.56
SREBF2-203ENST00000435061 SEPT12Q8IYM1 358 aa24.81■■□□□ 1.56
SREBF2-203ENST00000435061 BTG4Q9NY30 223 aa24.81■■□□□ 1.56
SREBF2-203ENST00000435061 TOPAZ1Q8N9V7 1692 aa24.78■■□□□ 1.56
SREBF2-203ENST00000435061 EP400Q96L91 3159 aa24.77■■□□□ 1.56
SREBF2-203ENST00000435061 PRDM11Q9NQV5 511 aa24.77■■□□□ 1.56
SREBF2-203ENST00000435061 COL14A1Q05707 1796 aaKnown RBP24.77■■□□□ 1.56
SREBF2-203ENST00000435061 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
SREBF2-203ENST00000435061 ROCK2O75116 1388 aaKnown RBP24.74■■□□□ 1.55
SREBF2-203ENST00000435061 PPIP5K1Q6PFW1 1433 aa24.74■■□□□ 1.55
SREBF2-203ENST00000435061 CRYBG1Q9Y4K1 1723 aa24.73■■□□□ 1.55
SREBF2-203ENST00000435061 ABTB2Q8N961 1025 aa24.73■■□□□ 1.55
SREBF2-203ENST00000435061 BRD4O60885 1362 aaPredicted RBP24.72■■□□□ 1.55
SREBF2-203ENST00000435061 KIAA0232Q92628 1395 aa24.72■■□□□ 1.55
SREBF2-203ENST00000435061 EVC2Q86UK5 1308 aa24.72■■□□□ 1.55
SREBF2-203ENST00000435061 NUTM2GQ5VZR2 741 aa24.72■■□□□ 1.55
SREBF2-203ENST00000435061 KRT27Q7Z3Y8 459 aa24.72■■□□□ 1.55
SREBF2-203ENST00000435061 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
SREBF2-203ENST00000435061 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
SREBF2-203ENST00000435061 NRAPQ86VF7 1730 aa24.71■■□□□ 1.55
SREBF2-203ENST00000435061 TRPM1Q7Z4N2 1603 aa24.71■■□□□ 1.55
SREBF2-203ENST00000435061 QRICH2Q9H0J4 1663 aa24.7■■□□□ 1.54
SREBF2-203ENST00000435061 FAM98CQ17RN3 349 aaKnown RBP24.7■■□□□ 1.54
SREBF2-203ENST00000435061 CABP1Q9NZU7 370 aa24.7■■□□□ 1.54
SREBF2-203ENST00000435061 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
SREBF2-203ENST00000435061 A0A0G2JS52 829 aa24.69■■□□□ 1.54
SREBF2-203ENST00000435061 ZC3H6P61129 1189 aaKnown RBP24.69■■□□□ 1.54
SREBF2-203ENST00000435061 MYT1Q01538 1121 aa24.69■■□□□ 1.54
SREBF2-203ENST00000435061 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
SREBF2-203ENST00000435061 BRWD3Q6RI45 1802 aa24.68■■□□□ 1.54
SREBF2-203ENST00000435061 USP19O94966 1318 aa24.67■■□□□ 1.54
SREBF2-203ENST00000435061 CHRNA2Q15822 529 aa24.67■■□□□ 1.54
SREBF2-203ENST00000435061 PHRF1Q9P1Y6 1649 aaKnown RBP24.65■■□□□ 1.54
SREBF2-203ENST00000435061 SF3B2Q13435 895 aaKnown RBP24.65■■□□□ 1.54
SREBF2-203ENST00000435061 CPDO75976 1380 aa24.65■■□□□ 1.54
SREBF2-203ENST00000435061 ZRANB1Q9UGI0 708 aa24.64■■□□□ 1.54
SREBF2-203ENST00000435061 SPATA31A1Q5TZJ5 1347 aa24.63■■□□□ 1.53
SREBF2-203ENST00000435061 USP6P35125 1406 aa24.63■■□□□ 1.53
SREBF2-203ENST00000435061 GCP02774 474 aa24.63■■□□□ 1.53
SREBF2-203ENST00000435061 STRN4Q9NRL3 753 aa24.63■■□□□ 1.53
SREBF2-203ENST00000435061 EVA1CP58658 441 aa24.61■■□□□ 1.53
SREBF2-203ENST00000435061 ZNF692Q9BU19 519 aaPredicted RBP24.61■■□□□ 1.53
SREBF2-203ENST00000435061 TRIM26Q12899 539 aaPredicted RBP24.6■■□□□ 1.53
SREBF2-203ENST00000435061 NRKQ7Z2Y5 1582 aa24.59■■□□□ 1.53
SREBF2-203ENST00000435061 TONSLQ96HA7 1378 aa24.59■■□□□ 1.53
SREBF2-203ENST00000435061 NLRP6P59044 892 aa24.59■■□□□ 1.53
SREBF2-203ENST00000435061 CARD11Q9BXL7 1154 aa24.59■■□□□ 1.53
SREBF2-203ENST00000435061 SSH2Q76I76 1423 aa24.59■■□□□ 1.53
SREBF2-203ENST00000435061 SBNO2Q9Y2G9 1366 aa24.57■■□□□ 1.52
SREBF2-203ENST00000435061 DEFB132Q7Z7B7 95 aa24.57■■□□□ 1.52
SREBF2-203ENST00000435061 BARGINQ6ZT62 677 aa24.55■■□□□ 1.52
SREBF2-203ENST00000435061 THSD7AQ9UPZ6 1657 aa24.55■■□□□ 1.52
SREBF2-203ENST00000435061 CAMTA1Q9Y6Y1 1673 aa24.55■■□□□ 1.52
SREBF2-203ENST00000435061 LARP1Q6PKG0 1096 aaKnown RBP24.53■■□□□ 1.52
SREBF2-203ENST00000435061 USP35Q9P2H5 1018 aa24.53■■□□□ 1.52
SREBF2-203ENST00000435061 BAG6P46379 1132 aa24.52■■□□□ 1.52
SREBF2-203ENST00000435061 TCP11L2Q8N4U5 519 aa24.52■■□□□ 1.52
SREBF2-203ENST00000435061 TTC21BQ7Z4L5 1316 aa24.52■■□□□ 1.52
SREBF2-203ENST00000435061 LMO7Q8WWI1 1683 aa24.52■■□□□ 1.52
SREBF2-203ENST00000435061 THRAP3Q9Y2W1 955 aaKnown RBP24.51■■□□□ 1.51
SREBF2-203ENST00000435061 TTC21AQ8NDW8 1320 aa24.51■■□□□ 1.51
SREBF2-203ENST00000435061 AATKQ6ZMQ8 1374 aa24.51■■□□□ 1.51
SREBF2-203ENST00000435061 CPSF1Q10570 1443 aaKnown RBP24.51■■□□□ 1.51
SREBF2-203ENST00000435061 SLIT3O75094 1523 aa24.51■■□□□ 1.51
SREBF2-203ENST00000435061 FAM182BQ5T319 152 aa24.5■■□□□ 1.51
SREBF2-203ENST00000435061 FAM196AQ6ZSG2 479 aa24.49■■□□□ 1.51
SREBF2-203ENST00000435061 SRCAPQ6ZRS2 3230 aa24.48■■□□□ 1.51
SREBF2-203ENST00000435061 KCNH5Q8NCM2 988 aa24.48■■□□□ 1.51
SREBF2-203ENST00000435061 COL5A2P05997 1499 aaPredicted RBP24.47■■□□□ 1.51
SREBF2-203ENST00000435061 KTN1Q86UP2 1357 aaKnown RBP24.47■■□□□ 1.51
SREBF2-203ENST00000435061 PDE3BQ13370 1112 aa24.47■■□□□ 1.51
SREBF2-203ENST00000435061 ZBTB7CA1YPR0 619 aa24.46■■□□□ 1.51
SREBF2-203ENST00000435061 PUS7Q96PZ0 661 aaKnown RBP24.46■■□□□ 1.51
SREBF2-203ENST00000435061 PIK3C2AO00443 1686 aa24.46■■□□□ 1.51
SREBF2-203ENST00000435061 CRB1P82279 1406 aa24.44■■□□□ 1.5
SREBF2-203ENST00000435061 ARHGEF25Q86VW2 580 aa24.44■■□□□ 1.5
SREBF2-203ENST00000435061 AKAP12Q02952 1782 aa24.44■■□□□ 1.5
SREBF2-203ENST00000435061 SLC24A1O60721 1099 aa24.42■■□□□ 1.5
SREBF2-203ENST00000435061 DISP2A7MBM2 1401 aa24.42■■□□□ 1.5
SREBF2-203ENST00000435061 RGPD1P0DJD0 1748 aa24.41■■□□□ 1.5
SREBF2-203ENST00000435061 EN1Q05925 392 aaPredicted RBP24.41■■□□□ 1.5
SREBF2-203ENST00000435061 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
SREBF2-203ENST00000435061 TRIM37O94972 964 aa24.4■■□□□ 1.5
SREBF2-203ENST00000435061 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
SREBF2-203ENST00000435061 AXIN2Q9Y2T1 843 aa24.4■■□□□ 1.5
SREBF2-203ENST00000435061 C11orf95C9JLR9 678 aaPredicted RBP24.39■■□□□ 1.49
SREBF2-203ENST00000435061 TOM1L2Q6ZVM7 507 aa24.39■■□□□ 1.49
SREBF2-203ENST00000435061 SLC12A5Q9H2X9 1139 aa24.39■■□□□ 1.49
SREBF2-203ENST00000435061 USP31Q70CQ4 1352 aa24.39■■□□□ 1.49
SREBF2-203ENST00000435061 WDR17Q8IZU2 1322 aa24.38■■□□□ 1.49
SREBF2-203ENST00000435061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.38■■□□□ 1.49
SREBF2-203ENST00000435061 TERF2IPQ9NYB0 399 aa24.38■■□□□ 1.49
SREBF2-203ENST00000435061 CD163L1Q9NR16 1453 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms