RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
NUP50-210ENST00000434760 GJD4Q96KN9 370 aaPredicted RBP22.73■■□□□ 1.23
NUP50-210ENST00000434760 ATAD2Q6PL18 1390 aa22.73■■□□□ 1.23
NUP50-210ENST00000434760 AKAP12Q02952 1782 aa22.72■■□□□ 1.23
NUP50-210ENST00000434760 NGDNQ8NEJ9 315 aaKnown RBP22.72■■□□□ 1.23
NUP50-210ENST00000434760 HAP1P54257 671 aaPredicted RBP22.71■■□□□ 1.23
NUP50-210ENST00000434760 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
NUP50-210ENST00000434760 PLEKHG5O94827 1062 aa22.7■■□□□ 1.22
NUP50-210ENST00000434760 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
NUP50-210ENST00000434760 LMO7Q8WWI1 1683 aa22.69■■□□□ 1.22
NUP50-210ENST00000434760 ACEP12821 1306 aa22.69■■□□□ 1.22
NUP50-210ENST00000434760 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
NUP50-210ENST00000434760 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
NUP50-210ENST00000434760 CCDC61Q9Y6R9 512 aa22.69■■□□□ 1.22
NUP50-210ENST00000434760 PIK3C2AO00443 1686 aa22.68■■□□□ 1.22
NUP50-210ENST00000434760 THSD7AQ9UPZ6 1657 aa22.68■■□□□ 1.22
NUP50-210ENST00000434760 FAM83GA6ND36 823 aa22.67■■□□□ 1.22
NUP50-210ENST00000434760 VPS72Q15906 364 aa22.67■■□□□ 1.22
NUP50-210ENST00000434760 NBPF8Q3BBV2 869 aa22.66■■□□□ 1.22
NUP50-210ENST00000434760 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
NUP50-210ENST00000434760 USP6P35125 1406 aa22.64■■□□□ 1.21
NUP50-210ENST00000434760 USP19O94966 1318 aa22.63■■□□□ 1.21
NUP50-210ENST00000434760 SLIT3O75094 1523 aa22.63■■□□□ 1.21
NUP50-210ENST00000434760 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
NUP50-210ENST00000434760 CABP2Q9NPB3 220 aa22.63■■□□□ 1.21
NUP50-210ENST00000434760 KIAA0232Q92628 1395 aa22.63■■□□□ 1.21
NUP50-210ENST00000434760 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
NUP50-210ENST00000434760 SRPK2P78362 688 aaKnown RBP22.62■■□□□ 1.21
NUP50-210ENST00000434760 SSH2Q76I76 1423 aa22.62■■□□□ 1.21
NUP50-210ENST00000434760 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
NUP50-210ENST00000434760 BRD4O60885 1362 aaPredicted RBP22.6■■□□□ 1.21
NUP50-210ENST00000434760 BTG4Q9NY30 223 aa22.59■■□□□ 1.21
NUP50-210ENST00000434760 SRCAPQ6ZRS2 3230 aa22.59■■□□□ 1.21
NUP50-210ENST00000434760 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
NUP50-210ENST00000434760 ONECUT3O60422 494 aaPredicted RBP22.58■■□□□ 1.21
NUP50-210ENST00000434760 CPDO75976 1380 aa22.58■■□□□ 1.21
NUP50-210ENST00000434760 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
NUP50-210ENST00000434760 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
NUP50-210ENST00000434760 CAMTA1Q9Y6Y1 1673 aa22.57■■□□□ 1.2
NUP50-210ENST00000434760 NUTM2GQ5VZR2 741 aa22.56■■□□□ 1.2
NUP50-210ENST00000434760 PRDM11Q9NQV5 511 aa22.56■■□□□ 1.2
NUP50-210ENST00000434760 COL18A1P39060 1754 aa22.55■■□□□ 1.2
NUP50-210ENST00000434760 SEPT12Q8IYM1 358 aa22.55■■□□□ 1.2
NUP50-210ENST00000434760 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
NUP50-210ENST00000434760 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
NUP50-210ENST00000434760 SPATA31A5Q5VU36 1347 aa22.54■■□□□ 1.2
NUP50-210ENST00000434760 SPATA31A7Q8IWB4 1347 aa22.54■■□□□ 1.2
NUP50-210ENST00000434760 CABP1Q9NZU7 370 aa22.53■■□□□ 1.2
NUP50-210ENST00000434760 BLMP54132 1417 aaPredicted RBP22.53■■□□□ 1.2
NUP50-210ENST00000434760 TNS1Q9HBL0 1735 aaKnown RBP22.53■■□□□ 1.2
NUP50-210ENST00000434760 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
NUP50-210ENST00000434760 CCDC9Q9Y3X0 531 aaKnown RBP22.52■■□□□ 1.2
NUP50-210ENST00000434760 CD163L1Q9NR16 1453 aa22.52■■□□□ 1.2
NUP50-210ENST00000434760 RGPD1P0DJD0 1748 aa22.51■■□□□ 1.19
NUP50-210ENST00000434760 CHRNA2Q15822 529 aa22.51■■□□□ 1.19
NUP50-210ENST00000434760 COL5A2P05997 1499 aaPredicted RBP22.5■■□□□ 1.19
NUP50-210ENST00000434760 NFAT5O94916 1531 aa22.5■■□□□ 1.19
NUP50-210ENST00000434760 PARP4Q9UKK3 1724 aaKnown RBP22.49■■□□□ 1.19
NUP50-210ENST00000434760 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
NUP50-210ENST00000434760 FAM98CQ17RN3 349 aaKnown RBP22.49■■□□□ 1.19
NUP50-210ENST00000434760 CARD11Q9BXL7 1154 aa22.48■■□□□ 1.19
NUP50-210ENST00000434760 SPATA31A1Q5TZJ5 1347 aa22.48■■□□□ 1.19
NUP50-210ENST00000434760 RGPD5Q99666 1765 aa22.48■■□□□ 1.19
NUP50-210ENST00000434760 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
NUP50-210ENST00000434760 NLRP13Q86W25 1043 aa22.46■■□□□ 1.19
NUP50-210ENST00000434760 CCDC125Q86Z20 511 aa22.46■■□□□ 1.19
NUP50-210ENST00000434760 GCP02774 474 aa22.45■■□□□ 1.18
NUP50-210ENST00000434760 LRRC37A3O60309 1634 aa22.44■■□□□ 1.18
NUP50-210ENST00000434760 ABCC6O95255 1503 aa22.44■■□□□ 1.18
NUP50-210ENST00000434760 LTN1O94822 1766 aa22.43■■□□□ 1.18
NUP50-210ENST00000434760 TTC21BQ7Z4L5 1316 aa22.42■■□□□ 1.18
NUP50-210ENST00000434760 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
NUP50-210ENST00000434760 STRN4Q9NRL3 753 aa22.41■■□□□ 1.18
NUP50-210ENST00000434760 KTN1Q86UP2 1357 aaKnown RBP22.4■■□□□ 1.18
NUP50-210ENST00000434760 TTC21AQ8NDW8 1320 aa22.4■■□□□ 1.18
NUP50-210ENST00000434760 A0A0G2JS52 829 aa22.4■■□□□ 1.18
NUP50-210ENST00000434760 MYT1Q01538 1121 aa22.4■■□□□ 1.18
NUP50-210ENST00000434760 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
NUP50-210ENST00000434760 NLRP6P59044 892 aa22.39■■□□□ 1.17
NUP50-210ENST00000434760 LARP1Q6PKG0 1096 aaKnown RBP22.38■■□□□ 1.17
NUP50-210ENST00000434760 TESK2Q96S53 571 aa22.38■■□□□ 1.17
NUP50-210ENST00000434760 ZNF692Q9BU19 519 aaPredicted RBP22.38■■□□□ 1.17
NUP50-210ENST00000434760 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
NUP50-210ENST00000434760 CRB1P82279 1406 aa22.38■■□□□ 1.17
NUP50-210ENST00000434760 A0A1W2PP64 1363 aa22.37■■□□□ 1.17
NUP50-210ENST00000434760 BARGINQ6ZT62 677 aa22.36■■□□□ 1.17
NUP50-210ENST00000434760 DEFB132Q7Z7B7 95 aa22.36■■□□□ 1.17
NUP50-210ENST00000434760 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
NUP50-210ENST00000434760 USP31Q70CQ4 1352 aa22.36■■□□□ 1.17
NUP50-210ENST00000434760 MYOM1P52179 1685 aa22.35■■□□□ 1.17
NUP50-210ENST00000434760 RREB1Q92766 1687 aa22.35■■□□□ 1.17
NUP50-210ENST00000434760 SBF2Q86WG5 1849 aa22.34■■□□□ 1.17
NUP50-210ENST00000434760 OVOS2A0A0J9YW53 1432 aa22.34■■□□□ 1.17
NUP50-210ENST00000434760 OVOS2Q6IE36 1432 aa22.34■■□□□ 1.17
NUP50-210ENST00000434760 FAM182BQ5T319 152 aa22.34■■□□□ 1.17
NUP50-210ENST00000434760 PUS7Q96PZ0 661 aaKnown RBP22.32■■□□□ 1.16
NUP50-210ENST00000434760 USP35Q9P2H5 1018 aa22.32■■□□□ 1.16
NUP50-210ENST00000434760 USP47Q96K76 1375 aa22.32■■□□□ 1.16
NUP50-210ENST00000434760 NINLQ9Y2I6 1382 aa22.32■■□□□ 1.16
NUP50-210ENST00000434760 ST20-MTHFSA0A0A6YYL1 179 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms