RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 ACEP12821 1306 aa28.91■■■□□ 2.22
LMBR1-208ENST00000434278 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.89■■■□□ 2.22
LMBR1-208ENST00000434278 UNC5CLQ8IV45 518 aa28.88■■■□□ 2.21
LMBR1-208ENST00000434278 PPIP5K1Q6PFW1 1433 aa28.86■■■□□ 2.21
LMBR1-208ENST00000434278 CRYBG1Q9Y4K1 1723 aa28.86■■■□□ 2.21
LMBR1-208ENST00000434278 PLCH1Q4KWH8 1693 aa28.85■■■□□ 2.21
LMBR1-208ENST00000434278 FAM83GA6ND36 823 aa28.84■■■□□ 2.21
LMBR1-208ENST00000434278 UPF1Q92900 1129 aaKnown RBP eCLIP28.84■■■□□ 2.21
LMBR1-208ENST00000434278 GJD4Q96KN9 370 aaPredicted RBP28.84■■■□□ 2.21
LMBR1-208ENST00000434278 EVC2Q86UK5 1308 aa28.82■■■□□ 2.2
LMBR1-208ENST00000434278 RALGAPBQ86X10 1494 aa28.82■■■□□ 2.2
LMBR1-208ENST00000434278 NWD2Q9ULI1 1742 aa28.81■■■□□ 2.2
LMBR1-208ENST00000434278 CARD11Q9BXL7 1154 aa28.81■■■□□ 2.2
LMBR1-208ENST00000434278 CABP1Q9NZU7 370 aa28.8■■■□□ 2.2
LMBR1-208ENST00000434278 GLI3P10071 1580 aa28.79■■■□□ 2.2
LMBR1-208ENST00000434278 NUTM2GQ5VZR2 741 aa28.79■■■□□ 2.2
LMBR1-208ENST00000434278 VPS72Q15906 364 aa28.76■■■□□ 2.19
LMBR1-208ENST00000434278 PHRF1Q9P1Y6 1649 aaKnown RBP28.76■■■□□ 2.19
LMBR1-208ENST00000434278 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
LMBR1-208ENST00000434278 ABTB2Q8N961 1025 aa28.74■■■□□ 2.19
LMBR1-208ENST00000434278 BTG4Q9NY30 223 aa28.74■■■□□ 2.19
LMBR1-208ENST00000434278 NRAPQ86VF7 1730 aa28.74■■■□□ 2.19
LMBR1-208ENST00000434278 SBNO2Q9Y2G9 1366 aa28.72■■■□□ 2.19
LMBR1-208ENST00000434278 USP6P35125 1406 aa28.71■■■□□ 2.19
LMBR1-208ENST00000434278 PRDM11Q9NQV5 511 aa28.7■■■□□ 2.18
LMBR1-208ENST00000434278 BRD4O60885 1362 aaPredicted RBP28.7■■■□□ 2.18
LMBR1-208ENST00000434278 KIAA0232Q92628 1395 aa28.7■■■□□ 2.18
LMBR1-208ENST00000434278 CCDC9Q9Y3X0 531 aaKnown RBP28.69■■■□□ 2.18
LMBR1-208ENST00000434278 ATAD2Q6PL18 1390 aa28.69■■■□□ 2.18
LMBR1-208ENST00000434278 ZC3H6P61129 1189 aaKnown RBP28.68■■■□□ 2.18
LMBR1-208ENST00000434278 PCGF6Q9BYE7 350 aa28.68■■■□□ 2.18
LMBR1-208ENST00000434278 SSH2Q76I76 1423 aa28.67■■■□□ 2.18
LMBR1-208ENST00000434278 USP19O94966 1318 aa28.67■■■□□ 2.18
LMBR1-208ENST00000434278 NRKQ7Z2Y5 1582 aa28.67■■■□□ 2.18
LMBR1-208ENST00000434278 CHRNA2Q15822 529 aa28.66■■■□□ 2.18
LMBR1-208ENST00000434278 NLRP13Q86W25 1043 aa28.65■■■□□ 2.18
LMBR1-208ENST00000434278 ONECUT3O60422 494 aaPredicted RBP28.64■■■□□ 2.18
LMBR1-208ENST00000434278 AKAP12Q02952 1782 aa28.63■■■□□ 2.17
LMBR1-208ENST00000434278 SEPT12Q8IYM1 358 aa28.63■■■□□ 2.17
LMBR1-208ENST00000434278 BRWD3Q6RI45 1802 aa28.62■■■□□ 2.17
LMBR1-208ENST00000434278 ZNF692Q9BU19 519 aaPredicted RBP28.61■■■□□ 2.17
LMBR1-208ENST00000434278 CPSF1Q10570 1443 aaKnown RBP28.6■■■□□ 2.17
LMBR1-208ENST00000434278 GCP02774 474 aa28.6■■■□□ 2.17
LMBR1-208ENST00000434278 NLRP6P59044 892 aa28.6■■■□□ 2.17
LMBR1-208ENST00000434278 PIK3C2AO00443 1686 aa28.6■■■□□ 2.17
LMBR1-208ENST00000434278 SPATA31A5Q5VU36 1347 aa28.59■■■□□ 2.17
LMBR1-208ENST00000434278 SPATA31A7Q8IWB4 1347 aa28.59■■■□□ 2.17
LMBR1-208ENST00000434278 CPDO75976 1380 aa28.59■■■□□ 2.17
LMBR1-208ENST00000434278 ST20-MTHFSA0A0A6YYL1 179 aa28.58■■■□□ 2.17
LMBR1-208ENST00000434278 TTC21BQ7Z4L5 1316 aa28.58■■■□□ 2.17
LMBR1-208ENST00000434278 FAM98CQ17RN3 349 aaKnown RBP28.57■■■□□ 2.16
LMBR1-208ENST00000434278 TESK2Q96S53 571 aa28.57■■■□□ 2.16
LMBR1-208ENST00000434278 SLIT3O75094 1523 aa28.56■■■□□ 2.16
LMBR1-208ENST00000434278 CLSPNQ9HAW4 1339 aa28.56■■■□□ 2.16
LMBR1-208ENST00000434278 STRN4Q9NRL3 753 aa28.56■■■□□ 2.16
LMBR1-208ENST00000434278 KTN1Q86UP2 1357 aaKnown RBP28.55■■■□□ 2.16
LMBR1-208ENST00000434278 LMO7Q8WWI1 1683 aa28.54■■■□□ 2.16
LMBR1-208ENST00000434278 CAMTA1Q9Y6Y1 1673 aa28.54■■■□□ 2.16
LMBR1-208ENST00000434278 CD163L1Q9NR16 1453 aa28.54■■■□□ 2.16
LMBR1-208ENST00000434278 MON2Q7Z3U7 1717 aa28.54■■■□□ 2.16
LMBR1-208ENST00000434278 TMC1Q8TDI8 760 aa28.53■■■□□ 2.16
LMBR1-208ENST00000434278 TTC21AQ8NDW8 1320 aa28.52■■■□□ 2.16
LMBR1-208ENST00000434278 A0A0G2JS52 829 aa28.52■■■□□ 2.16
LMBR1-208ENST00000434278 MYT1Q01538 1121 aa28.52■■■□□ 2.16
LMBR1-208ENST00000434278 SLC12A5Q9H2X9 1139 aa28.52■■■□□ 2.16
LMBR1-208ENST00000434278 TIMELESSQ9UNS1 1208 aa28.52■■■□□ 2.16
LMBR1-208ENST00000434278 SPATA31A1Q5TZJ5 1347 aa28.51■■■□□ 2.15
LMBR1-208ENST00000434278 EP400Q96L91 3159 aa28.51■■■□□ 2.15
LMBR1-208ENST00000434278 KRT27Q7Z3Y8 459 aa28.51■■■□□ 2.15
LMBR1-208ENST00000434278 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
LMBR1-208ENST00000434278 EVA1CP58658 441 aa28.49■■■□□ 2.15
LMBR1-208ENST00000434278 ZBTB7CA1YPR0 619 aa28.48■■■□□ 2.15
LMBR1-208ENST00000434278 USP47Q96K76 1375 aa28.48■■■□□ 2.15
LMBR1-208ENST00000434278 THSD7AQ9UPZ6 1657 aa28.48■■■□□ 2.15
LMBR1-208ENST00000434278 LARP1Q6PKG0 1096 aaKnown RBP28.47■■■□□ 2.15
LMBR1-208ENST00000434278 CCDC125Q86Z20 511 aa28.47■■■□□ 2.15
LMBR1-208ENST00000434278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.45■■■□□ 2.142e-6■■□□□ 12.3
LMBR1-208ENST00000434278 ZRANB1Q9UGI0 708 aa28.45■■■□□ 2.14
LMBR1-208ENST00000434278 COL5A2P05997 1499 aaPredicted RBP28.45■■■□□ 2.14
LMBR1-208ENST00000434278 HDGFL2Q7Z4V5 671 aaPredicted RBP28.44■■■□□ 2.14
LMBR1-208ENST00000434278 USP35Q9P2H5 1018 aa28.44■■■□□ 2.14
LMBR1-208ENST00000434278 AATKQ6ZMQ8 1374 aa28.44■■■□□ 2.14
LMBR1-208ENST00000434278 COL18A1P39060 1754 aa28.43■■■□□ 2.14
LMBR1-208ENST00000434278 A0A1W2PP64 1363 aa28.43■■■□□ 2.14
LMBR1-208ENST00000434278 SLC24A1O60721 1099 aa28.43■■■□□ 2.14
LMBR1-208ENST00000434278 KCNH5Q8NCM2 988 aa28.43■■■□□ 2.14
LMBR1-208ENST00000434278 BLMP54132 1417 aaPredicted RBP28.43■■■□□ 2.14
LMBR1-208ENST00000434278 SOX12O15370 315 aa28.42■■■□□ 2.14
LMBR1-208ENST00000434278 USP31Q70CQ4 1352 aa28.41■■■□□ 2.14
LMBR1-208ENST00000434278 ARHGEF25Q86VW2 580 aa28.41■■■□□ 2.14
LMBR1-208ENST00000434278 NME9Q86XW9 330 aa28.41■■■□□ 2.14
LMBR1-208ENST00000434278 TERF2IPQ9NYB0 399 aa28.41■■■□□ 2.14
LMBR1-208ENST00000434278 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
LMBR1-208ENST00000434278 NFAT5O94916 1531 aa28.39■■■□□ 2.14
LMBR1-208ENST00000434278 EDC4Q6P2E9 1401 aaKnown RBP28.39■■■□□ 2.14
LMBR1-208ENST00000434278 BARGINQ6ZT62 677 aa28.39■■■□□ 2.14
LMBR1-208ENST00000434278 AXIN2Q9Y2T1 843 aa28.39■■■□□ 2.14
LMBR1-208ENST00000434278 USP54Q70EL1 1684 aa28.38■■■□□ 2.13
LMBR1-208ENST00000434278 FAM182BQ5T319 152 aa28.38■■■□□ 2.13
LMBR1-208ENST00000434278 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms