RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 ATP7BP35670 1465 aa28.81■■■□□ 2.2
APOE-203ENST00000434152 CCDC61Q9Y6R9 512 aa28.8■■■□□ 2.2
APOE-203ENST00000434152 VPS72Q15906 364 aa28.79■■■□□ 2.2
APOE-203ENST00000434152 TRPM3Q9HCF6 1732 aaPredicted RBP28.79■■■□□ 2.2
APOE-203ENST00000434152 ITSN1Q15811 1721 aa28.77■■■□□ 2.2
APOE-203ENST00000434152 SBNO2Q9Y2G9 1366 aa28.76■■■□□ 2.2
APOE-203ENST00000434152 PLEKHG3A1L390 1219 aa28.76■■■□□ 2.19
APOE-203ENST00000434152 ACEP12821 1306 aa28.75■■■□□ 2.19
APOE-203ENST00000434152 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.75■■■□□ 2.19
APOE-203ENST00000434152 CCDC9Q9Y3X0 531 aaKnown RBP28.74■■■□□ 2.19
APOE-203ENST00000434152 GLI3P10071 1580 aa28.74■■■□□ 2.19
APOE-203ENST00000434152 ALS2Q96Q42 1657 aa28.74■■■□□ 2.19
APOE-203ENST00000434152 POLR3AO14802 1390 aaPredicted RBP28.73■■■□□ 2.19
APOE-203ENST00000434152 SRPK2P78362 688 aaKnown RBP28.72■■■□□ 2.19
APOE-203ENST00000434152 BTG4Q9NY30 223 aa28.72■■■□□ 2.19
APOE-203ENST00000434152 ABCA3Q99758 1704 aa28.72■■■□□ 2.19
APOE-203ENST00000434152 ONECUT3O60422 494 aaPredicted RBP28.71■■■□□ 2.19
APOE-203ENST00000434152 SEPT12Q8IYM1 358 aa28.71■■■□□ 2.19
APOE-203ENST00000434152 CABP2Q9NPB3 220 aa28.71■■■□□ 2.19
APOE-203ENST00000434152 TOPAZ1Q8N9V7 1692 aa28.7■■■□□ 2.19
APOE-203ENST00000434152 NUTM2GQ5VZR2 741 aa28.69■■■□□ 2.18
APOE-203ENST00000434152 EVC2Q86UK5 1308 aa28.69■■■□□ 2.18
APOE-203ENST00000434152 SLC24A1O60721 1099 aa28.67■■■□□ 2.18
APOE-203ENST00000434152 CCDC125Q86Z20 511 aa28.66■■■□□ 2.18
APOE-203ENST00000434152 PRDM11Q9NQV5 511 aa28.66■■■□□ 2.18
APOE-203ENST00000434152 PLCH1Q4KWH8 1693 aa28.66■■■□□ 2.18
APOE-203ENST00000434152 NWD2Q9ULI1 1742 aa28.66■■■□□ 2.18
APOE-203ENST00000434152 ABTB2Q8N961 1025 aa28.63■■■□□ 2.17
APOE-203ENST00000434152 PPIP5K1Q6PFW1 1433 aa28.62■■■□□ 2.17
APOE-203ENST00000434152 ZC3H6P61129 1189 aaKnown RBP28.62■■■□□ 2.17
APOE-203ENST00000434152 CABP1Q9NZU7 370 aa28.62■■■□□ 2.17
APOE-203ENST00000434152 CHRNA2Q15822 529 aa28.61■■■□□ 2.17
APOE-203ENST00000434152 KIAA0232Q92628 1395 aa28.61■■■□□ 2.17
APOE-203ENST00000434152 FAM98CQ17RN3 349 aaKnown RBP28.6■■■□□ 2.17
APOE-203ENST00000434152 USP47Q96K76 1375 aa28.6■■■□□ 2.17
APOE-203ENST00000434152 KRT27Q7Z3Y8 459 aa28.59■■■□□ 2.17
APOE-203ENST00000434152 COL14A1Q05707 1796 aaKnown RBP28.59■■■□□ 2.17
APOE-203ENST00000434152 PUS7Q96PZ0 661 aaKnown RBP28.58■■■□□ 2.17
APOE-203ENST00000434152 SPATA31A5Q5VU36 1347 aa28.58■■■□□ 2.17
APOE-203ENST00000434152 SPATA31A7Q8IWB4 1347 aa28.58■■■□□ 2.17
APOE-203ENST00000434152 CRYBG1Q9Y4K1 1723 aa28.57■■■□□ 2.16
APOE-203ENST00000434152 ST20-MTHFSA0A0A6YYL1 179 aa28.57■■■□□ 2.16
APOE-203ENST00000434152 A0A0G2JS52 829 aa28.57■■■□□ 2.16
APOE-203ENST00000434152 MYT1Q01538 1121 aa28.57■■■□□ 2.16
APOE-203ENST00000434152 TESK2Q96S53 571 aa28.56■■■□□ 2.16
APOE-203ENST00000434152 NRAPQ86VF7 1730 aa28.55■■■□□ 2.16
APOE-203ENST00000434152 EP400Q96L91 3159 aa28.55■■■□□ 2.16
APOE-203ENST00000434152 NLRP13Q86W25 1043 aa28.54■■■□□ 2.16
APOE-203ENST00000434152 STRN4Q9NRL3 753 aa28.53■■■□□ 2.16
APOE-203ENST00000434152 BRWD3Q6RI45 1802 aa28.53■■■□□ 2.16
APOE-203ENST00000434152 BLMP54132 1417 aaPredicted RBP28.52■■■□□ 2.16
APOE-203ENST00000434152 USP19O94966 1318 aa28.52■■■□□ 2.16
APOE-203ENST00000434152 BRD4O60885 1362 aaPredicted RBP28.51■■■□□ 2.16
APOE-203ENST00000434152 GCP02774 474 aa28.51■■■□□ 2.15
APOE-203ENST00000434152 SPATA31A1Q5TZJ5 1347 aa28.49■■■□□ 2.15
APOE-203ENST00000434152 EVA1CP58658 441 aa28.49■■■□□ 2.15
APOE-203ENST00000434152 PHRF1Q9P1Y6 1649 aaKnown RBP28.48■■■□□ 2.15
APOE-203ENST00000434152 DEFB132Q7Z7B7 95 aa28.48■■■□□ 2.15
APOE-203ENST00000434152 USP6P35125 1406 aa28.48■■■□□ 2.15
APOE-203ENST00000434152 NLRP6P59044 892 aa28.47■■■□□ 2.15
APOE-203ENST00000434152 SF3B2Q13435 895 aaKnown RBP28.47■■■□□ 2.15
APOE-203ENST00000434152 ZRANB1Q9UGI0 708 aa28.47■■■□□ 2.15
APOE-203ENST00000434152 CPDO75976 1380 aa28.47■■■□□ 2.15
APOE-203ENST00000434152 AKAP12Q02952 1782 aa28.45■■■□□ 2.15
APOE-203ENST00000434152 ZNF692Q9BU19 519 aaPredicted RBP28.45■■■□□ 2.14
APOE-203ENST00000434152 SSH2Q76I76 1423 aa28.44■■■□□ 2.14
APOE-203ENST00000434152 TMF1P82094 1093 aa28.44■■■□□ 2.14
APOE-203ENST00000434152 FAM182BQ5T319 152 aa28.44■■■□□ 2.14
APOE-203ENST00000434152 USP35Q9P2H5 1018 aa28.43■■■□□ 2.14
APOE-203ENST00000434152 NINLQ9Y2I6 1382 aa28.42■■■□□ 2.14
APOE-203ENST00000434152 EIF4G2P78344 907 aaKnown RBP eCLIP28.42■■■□□ 2.14
APOE-203ENST00000434152 LARP1Q6PKG0 1096 aaKnown RBP28.42■■■□□ 2.14
APOE-203ENST00000434152 CAMTA1Q9Y6Y1 1673 aa28.42■■■□□ 2.14
APOE-203ENST00000434152 NRKQ7Z2Y5 1582 aa28.41■■■□□ 2.14
APOE-203ENST00000434152 CDCA8Q53HL2 280 aa28.41■■■□□ 2.14
APOE-203ENST00000434152 CPSF1Q10570 1443 aaKnown RBP28.41■■■□□ 2.14
APOE-203ENST00000434152 TTC21BQ7Z4L5 1316 aa28.4■■■□□ 2.14
APOE-203ENST00000434152 BARGINQ6ZT62 677 aa28.38■■■□□ 2.13
APOE-203ENST00000434152 ZBTB7CA1YPR0 619 aa28.37■■■□□ 2.13
APOE-203ENST00000434152 MON2Q7Z3U7 1717 aa28.37■■■□□ 2.13
APOE-203ENST00000434152 TCP11L2Q8N4U5 519 aa28.35■■■□□ 2.13
APOE-203ENST00000434152 THSD7AQ9UPZ6 1657 aa28.35■■■□□ 2.13
APOE-203ENST00000434152 CD163L1Q9NR16 1453 aa28.34■■■□□ 2.13
APOE-203ENST00000434152 BAG6P46379 1132 aa28.33■■■□□ 2.13
APOE-203ENST00000434152 LMO7Q8WWI1 1683 aa28.32■■■□□ 2.12
APOE-203ENST00000434152 HSPA5P11021 654 aaKnown RBP28.32■■■□□ 2.12
APOE-203ENST00000434152 TTC21AQ8NDW8 1320 aa28.32■■■□□ 2.12
APOE-203ENST00000434152 AATKQ6ZMQ8 1374 aa28.32■■■□□ 2.12
APOE-203ENST00000434152 KTN1Q86UP2 1357 aaKnown RBP28.32■■■□□ 2.12
APOE-203ENST00000434152 SLIT3O75094 1523 aa28.32■■■□□ 2.12
APOE-203ENST00000434152 TERF2IPQ9NYB0 399 aa28.31■■■□□ 2.12
APOE-203ENST00000434152 THRAP3Q9Y2W1 955 aaKnown RBP28.31■■■□□ 2.12
APOE-203ENST00000434152 FAM196AQ6ZSG2 479 aa28.3■■■□□ 2.12
APOE-203ENST00000434152 TMC1Q8TDI8 760 aa28.3■■■□□ 2.12
APOE-203ENST00000434152 SLC12A5Q9H2X9 1139 aa28.3■■■□□ 2.12
APOE-203ENST00000434152 COL5A2P05997 1499 aaPredicted RBP28.29■■■□□ 2.12
APOE-203ENST00000434152 PDE3BQ13370 1112 aa28.29■■■□□ 2.12
APOE-203ENST00000434152 HDGFL2Q7Z4V5 671 aaPredicted RBP28.29■■■□□ 2.12
APOE-203ENST00000434152 KCNH5Q8NCM2 988 aa28.29■■■□□ 2.12
APOE-203ENST00000434152 AXIN2Q9Y2T1 843 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms