RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.14■□□□□ 0.97
CNOT9-205ENST00000433439 USP6P35125 1406 aa21.13■□□□□ 0.97
CNOT9-205ENST00000433439 AHDC1Q5TGY3 1603 aaPredicted RBP21.13■□□□□ 0.97
CNOT9-205ENST00000433439 SOS2Q07890 1332 aaPredicted RBP21.12■□□□□ 0.97
CNOT9-205ENST00000433439 PXDNQ92626 1479 aa21.12■□□□□ 0.97
CNOT9-205ENST00000433439 MON2Q7Z3U7 1717 aa21.1■□□□□ 0.97
CNOT9-205ENST00000433439 NUTM2GQ5VZR2 741 aa21.1■□□□□ 0.97
CNOT9-205ENST00000433439 CARD14Q9BXL6 1004 aa21.1■□□□□ 0.97
CNOT9-205ENST00000433439 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
CNOT9-205ENST00000433439 TTC21BQ7Z4L5 1316 aa21.09■□□□□ 0.97
CNOT9-205ENST00000433439 CNGB1Q14028 1251 aaPredicted RBP21.09■□□□□ 0.97
CNOT9-205ENST00000433439 EDC4Q6P2E9 1401 aaKnown RBP21.08■□□□□ 0.97
CNOT9-205ENST00000433439 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
CNOT9-205ENST00000433439 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
CNOT9-205ENST00000433439 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
CNOT9-205ENST00000433439 RGS17Q9UGC6 210 aaPredicted RBP21.07■□□□□ 0.96
CNOT9-205ENST00000433439 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
CNOT9-205ENST00000433439 TRPM3Q9HCF6 1732 aaPredicted RBP21.07■□□□□ 0.96
CNOT9-205ENST00000433439 SPATA31A3Q5VYP0 1347 aa21.06■□□□□ 0.96
CNOT9-205ENST00000433439 TNS3Q68CZ2 1445 aa21.06■□□□□ 0.96
CNOT9-205ENST00000433439 NME9Q86XW9 330 aa21.06■□□□□ 0.96
CNOT9-205ENST00000433439 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
CNOT9-205ENST00000433439 NRKQ7Z2Y5 1582 aa21.05■□□□□ 0.96
CNOT9-205ENST00000433439 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
CNOT9-205ENST00000433439 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
CNOT9-205ENST00000433439 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
CNOT9-205ENST00000433439 BRD4O60885 1362 aaPredicted RBP21.03■□□□□ 0.96
CNOT9-205ENST00000433439 NLRP6P59044 892 aa21.03■□□□□ 0.96
CNOT9-205ENST00000433439 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.96
CNOT9-205ENST00000433439 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.95
CNOT9-205ENST00000433439 ARHGEF10O15013 1369 aa21■□□□□ 0.95
CNOT9-205ENST00000433439 ALS2Q96Q42 1657 aa21■□□□□ 0.95
CNOT9-205ENST00000433439 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
CNOT9-205ENST00000433439 PIK3C2AO00443 1686 aa20.99■□□□□ 0.95
CNOT9-205ENST00000433439 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
CNOT9-205ENST00000433439 FYB1O15117 783 aa20.99■□□□□ 0.95
CNOT9-205ENST00000433439 SOX12O15370 315 aa20.99■□□□□ 0.95
CNOT9-205ENST00000433439 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
CNOT9-205ENST00000433439 HAP1P54257 671 aaPredicted RBP20.99■□□□□ 0.95
CNOT9-205ENST00000433439 CC2D1BQ5T0F9 858 aaKnown RBP20.99■□□□□ 0.95
CNOT9-205ENST00000433439 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
CNOT9-205ENST00000433439 JCADQ9P266 1359 aa20.98■□□□□ 0.95
CNOT9-205ENST00000433439 NUTM2BA6NNL0 878 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-205ENST00000433439 NUTM2EB1AL46 878 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-205ENST00000433439 NUTM2AQ8IVF1 878 aaPredicted RBP20.98■□□□□ 0.95
CNOT9-205ENST00000433439 COG3Q96JB2 828 aa20.98■□□□□ 0.95
CNOT9-205ENST00000433439 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
CNOT9-205ENST00000433439 AMER1Q5JTC6 1135 aaPredicted RBP20.94■□□□□ 0.94
CNOT9-205ENST00000433439 ZBTB7CA1YPR0 619 aa20.93■□□□□ 0.94
CNOT9-205ENST00000433439 TNNT2P45379 298 aaPredicted RBP20.93■□□□□ 0.94
CNOT9-205ENST00000433439 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
CNOT9-205ENST00000433439 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
CNOT9-205ENST00000433439 USP31Q70CQ4 1352 aa20.92■□□□□ 0.94
CNOT9-205ENST00000433439 OVOS2A0A0J9YW53 1432 aa20.91■□□□□ 0.94
CNOT9-205ENST00000433439 OVOS2Q6IE36 1432 aa20.91■□□□□ 0.94
CNOT9-205ENST00000433439 NSD2O96028 1365 aa20.9■□□□□ 0.94
CNOT9-205ENST00000433439 USP19O94966 1318 aa20.9■□□□□ 0.94
CNOT9-205ENST00000433439 ADAMTS2O95450 1211 aa20.9■□□□□ 0.94
CNOT9-205ENST00000433439 POTEAQ6S8J7 498 aa20.9■□□□□ 0.94
CNOT9-205ENST00000433439 MARF1Q9Y4F3 1742 aaKnown RBP20.9■□□□□ 0.94
CNOT9-205ENST00000433439 COL22A1Q8NFW1 1626 aaPredicted RBP20.89■□□□□ 0.94
CNOT9-205ENST00000433439 GCP02774 474 aa20.89■□□□□ 0.93
CNOT9-205ENST00000433439 FBLN1P23142 703 aa20.89■□□□□ 0.93
CNOT9-205ENST00000433439 ZC3H6P61129 1189 aaKnown RBP20.89■□□□□ 0.93
CNOT9-205ENST00000433439 SPATA31A6Q5VVP1 1343 aa20.88■□□□□ 0.93
CNOT9-205ENST00000433439 PHRF1Q9P1Y6 1649 aaKnown RBP20.88■□□□□ 0.93
CNOT9-205ENST00000433439 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
CNOT9-205ENST00000433439 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
CNOT9-205ENST00000433439 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
CNOT9-205ENST00000433439 MEX3CQ5U5Q3 659 aaKnown RBP20.86■□□□□ 0.93
CNOT9-205ENST00000433439 SLIT3O75094 1523 aa20.86■□□□□ 0.93
CNOT9-205ENST00000433439 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
CNOT9-205ENST00000433439 USP54Q70EL1 1684 aa20.85■□□□□ 0.93
CNOT9-205ENST00000433439 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
CNOT9-205ENST00000433439 RRS1Q15050 365 aaKnown RBP20.83■□□□□ 0.93
CNOT9-205ENST00000433439 CHRNA2Q15822 529 aa20.83■□□□□ 0.93
CNOT9-205ENST00000433439 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.93
CNOT9-205ENST00000433439 KIAA0232Q92628 1395 aa20.83■□□□□ 0.92
CNOT9-205ENST00000433439 LRP6O75581 1613 aa20.82■□□□□ 0.92
CNOT9-205ENST00000433439 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
CNOT9-205ENST00000433439 NFAT5O94916 1531 aa20.8■□□□□ 0.92
CNOT9-205ENST00000433439 ANP32CO43423 234 aa20.8■□□□□ 0.92
CNOT9-205ENST00000433439 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
CNOT9-205ENST00000433439 C8orf37Q96NL8 207 aa20.8■□□□□ 0.92
CNOT9-205ENST00000433439 AMPHP49418 695 aa20.79■□□□□ 0.92
CNOT9-205ENST00000433439 EMILIN1Q9Y6C2 1016 aa20.79■□□□□ 0.92
CNOT9-205ENST00000433439 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
CNOT9-205ENST00000433439 ARHGEF25Q86VW2 580 aa20.78■□□□□ 0.92
CNOT9-205ENST00000433439 FAM83GA6ND36 823 aa20.77■□□□□ 0.92
CNOT9-205ENST00000433439 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
CNOT9-205ENST00000433439 LTN1O94822 1766 aa20.77■□□□□ 0.91
CNOT9-205ENST00000433439 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
CNOT9-205ENST00000433439 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
CNOT9-205ENST00000433439 RALBP1Q15311 655 aa20.76■□□□□ 0.91
CNOT9-205ENST00000433439 PRKRIP1Q9H875 184 aaPredicted RBP20.76■□□□□ 0.91
CNOT9-205ENST00000433439 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
CNOT9-205ENST00000433439 CPDO75976 1380 aa20.75■□□□□ 0.91
CNOT9-205ENST00000433439 AATKQ6ZMQ8 1374 aa20.75■□□□□ 0.91
CNOT9-205ENST00000433439 PPP2R1AP30153 589 aa20.75■□□□□ 0.91
CNOT9-205ENST00000433439 MTHFSP49914 203 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms