RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 CCDC61Q9Y6R9 512 aa26.54■■□□□ 1.84
SDHAF3-202ENST00000432641 ITSN1Q15811 1721 aa26.54■■□□□ 1.84
SDHAF3-202ENST00000432641 NUDT16Q96DE0 195 aaKnown RBP26.52■■□□□ 1.84
SDHAF3-202ENST00000432641 DIP2AQ14689 1571 aa26.52■■□□□ 1.84
SDHAF3-202ENST00000432641 DIAPH1O60610 1272 aaKnown RBP26.51■■□□□ 1.83
SDHAF3-202ENST00000432641 TCERG1O14776 1098 aaKnown RBP26.51■■□□□ 1.83
SDHAF3-202ENST00000432641 ZNF692Q9BU19 519 aaPredicted RBP26.51■■□□□ 1.83
SDHAF3-202ENST00000432641 MYH16Q9H6N6 1097 aa26.51■■□□□ 1.83
SDHAF3-202ENST00000432641 DMRT2Q9Y5R5 561 aa26.51■■□□□ 1.83
SDHAF3-202ENST00000432641 PLEKHF1Q96S99 279 aa26.49■■□□□ 1.83
SDHAF3-202ENST00000432641 MAPK8IP3Q9UPT6 1336 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 AATKQ6ZMQ8 1374 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 ROBO2Q9HCK4 1378 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 U2SURPO15042 1029 aaKnown RBP26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 MSH5O43196 834 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 PDE3AQ14432 1141 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 NEUROD2Q15784 382 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 C20orf194Q5TEA3 1177 aa26.48■■□□□ 1.83
SDHAF3-202ENST00000432641 LTKP29376 864 aa26.47■■□□□ 1.83
SDHAF3-202ENST00000432641 RRP7AQ9Y3A4 280 aaKnown RBP26.47■■□□□ 1.83
SDHAF3-202ENST00000432641 TOPAZ1Q8N9V7 1692 aa26.46■■□□□ 1.83
SDHAF3-202ENST00000432641 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
SDHAF3-202ENST00000432641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.46■■□□□ 1.83
SDHAF3-202ENST00000432641 THEMISQ8N1K5 641 aaPredicted RBP26.46■■□□□ 1.83
SDHAF3-202ENST00000432641 MS4A1P11836 297 aa26.45■■□□□ 1.83
SDHAF3-202ENST00000432641 MAP2P11137 1827 aaKnown RBP26.44■■□□□ 1.82
SDHAF3-202ENST00000432641 CDK12Q9NYV4 1490 aaPredicted RBP26.44■■□□□ 1.82
SDHAF3-202ENST00000432641 TBX22Q9Y458 520 aa26.44■■□□□ 1.82
SDHAF3-202ENST00000432641 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.44■■□□□ 1.82
SDHAF3-202ENST00000432641 IL16Q14005 1332 aa26.44■■□□□ 1.82
SDHAF3-202ENST00000432641 FCHSD2O94868 740 aa26.43■■□□□ 1.82
SDHAF3-202ENST00000432641 CEBPAP49715 358 aaPredicted RBP26.43■■□□□ 1.82
SDHAF3-202ENST00000432641 PTCH1Q13635 1447 aa26.43■■□□□ 1.82
SDHAF3-202ENST00000432641 CENPQQ7L2Z9 268 aaPredicted RBP26.43■■□□□ 1.82
SDHAF3-202ENST00000432641 TMPOP42166 694 aaKnown RBP26.42■■□□□ 1.82
SDHAF3-202ENST00000432641 POLKQ9UBT6 870 aa26.42■■□□□ 1.82
SDHAF3-202ENST00000432641 BCAR3O75815 825 aa26.42■■□□□ 1.82
SDHAF3-202ENST00000432641 AAMPQ13685 434 aa26.41■■□□□ 1.82
SDHAF3-202ENST00000432641 COG3Q96JB2 828 aa26.4■■□□□ 1.82
SDHAF3-202ENST00000432641 KDM2BQ8NHM5 1336 aa26.39■■□□□ 1.82
SDHAF3-202ENST00000432641 NEFMP07197 916 aa26.38■■□□□ 1.81
SDHAF3-202ENST00000432641 NRKQ7Z2Y5 1582 aa26.38■■□□□ 1.81
SDHAF3-202ENST00000432641 RARSP54136 660 aaKnown RBP26.38■■□□□ 1.81
SDHAF3-202ENST00000432641 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
SDHAF3-202ENST00000432641 PLEKHG3A1L390 1219 aa26.37■■□□□ 1.81
SDHAF3-202ENST00000432641 PRR36Q9H6K5 1346 aa26.37■■□□□ 1.81
SDHAF3-202ENST00000432641 CANXP27824 592 aaKnown RBP26.37■■□□□ 1.81
SDHAF3-202ENST00000432641 LRRC7Q96NW7 1537 aa26.36■■□□□ 1.81
SDHAF3-202ENST00000432641 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
SDHAF3-202ENST00000432641 NME9Q86XW9 330 aa26.35■■□□□ 1.81
SDHAF3-202ENST00000432641 PIK3R4Q99570 1358 aa26.34■■□□□ 1.81
SDHAF3-202ENST00000432641 TRIM35Q9UPQ4 493 aa26.34■■□□□ 1.81
SDHAF3-202ENST00000432641 XRN1Q8IZH2 1706 aaKnown RBP26.32■■□□□ 1.8
SDHAF3-202ENST00000432641 CEP170BQ9Y4F5 1589 aaPredicted RBP26.32■■□□□ 1.8
SDHAF3-202ENST00000432641 RIMS1Q86UR5 1692 aaKnown RBP26.32■■□□□ 1.8
SDHAF3-202ENST00000432641 SLC26A8Q96RN1 970 aa26.32■■□□□ 1.8
SDHAF3-202ENST00000432641 RSPH6AQ9H0K4 717 aa26.32■■□□□ 1.8
SDHAF3-202ENST00000432641 AMOTL2Q9Y2J4 779 aa26.32■■□□□ 1.8
SDHAF3-202ENST00000432641 RIPK4P57078 832 aa26.3■■□□□ 1.8
SDHAF3-202ENST00000432641 USP6P35125 1406 aa26.3■■□□□ 1.8
SDHAF3-202ENST00000432641 TTC21BQ7Z4L5 1316 aa26.29■■□□□ 1.8
SDHAF3-202ENST00000432641 PPM1GO15355 546 aaPredicted RBP26.29■■□□□ 1.8
SDHAF3-202ENST00000432641 IL13P35225 146 aa26.29■■□□□ 1.8
SDHAF3-202ENST00000432641 CALD1Q05682 793 aaKnown RBP26.28■■□□□ 1.8
SDHAF3-202ENST00000432641 NALCNQ8IZF0 1738 aa26.28■■□□□ 1.8
SDHAF3-202ENST00000432641 ACEP12821 1306 aa26.28■■□□□ 1.8
SDHAF3-202ENST00000432641 NCKAP5LQ9HCH0 1330 aa26.28■■□□□ 1.8
SDHAF3-202ENST00000432641 EMILIN1Q9Y6C2 1016 aa26.27■■□□□ 1.8
SDHAF3-202ENST00000432641 OVOS2A0A0J9YW53 1432 aa26.26■■□□□ 1.79
SDHAF3-202ENST00000432641 OVOS2Q6IE36 1432 aa26.26■■□□□ 1.79
SDHAF3-202ENST00000432641 PRKAR2BP31323 418 aa26.26■■□□□ 1.79
SDHAF3-202ENST00000432641 TTC21AQ8NDW8 1320 aa26.25■■□□□ 1.79
SDHAF3-202ENST00000432641 ZNF142P52746 1687 aaPredicted RBP26.25■■□□□ 1.79
SDHAF3-202ENST00000432641 NFE2L2Q16236 605 aa26.24■■□□□ 1.79
SDHAF3-202ENST00000432641 CLUAP1Q96AJ1 413 aa26.24■■□□□ 1.79
SDHAF3-202ENST00000432641 ANKARQ7Z5J8 1434 aa26.24■■□□□ 1.79
SDHAF3-202ENST00000432641 ANP32AP39687 249 aaKnown RBP26.24■■□□□ 1.79
SDHAF3-202ENST00000432641 FRAT1Q92837 279 aaPredicted RBP26.23■■□□□ 1.79
SDHAF3-202ENST00000432641 SSH2Q76I76 1423 aa26.23■■□□□ 1.79
SDHAF3-202ENST00000432641 PDE4AP27815 886 aa26.23■■□□□ 1.79
SDHAF3-202ENST00000432641 ZNF428Q96B54 188 aa26.22■■□□□ 1.79
SDHAF3-202ENST00000432641 BACH2Q9BYV9 841 aa26.22■■□□□ 1.79
SDHAF3-202ENST00000432641 ZRANB1Q9UGI0 708 aa26.22■■□□□ 1.79
SDHAF3-202ENST00000432641 USP31Q70CQ4 1352 aa26.22■■□□□ 1.79
SDHAF3-202ENST00000432641 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
SDHAF3-202ENST00000432641 ZKSCAN2Q63HK3 967 aa26.2■■□□□ 1.78
SDHAF3-202ENST00000432641 PANK1Q8TE04 598 aa26.2■■□□□ 1.78
SDHAF3-202ENST00000432641 FBLN1P23142 703 aa26.19■■□□□ 1.78
SDHAF3-202ENST00000432641 EXOSC9Q06265 439 aaKnown RBP26.19■■□□□ 1.78
SDHAF3-202ENST00000432641 COG6Q9Y2V7 657 aa26.19■■□□□ 1.78
SDHAF3-202ENST00000432641 TSR2Q969E8 191 aaKnown RBP26.19■■□□□ 1.78
SDHAF3-202ENST00000432641 PLPPR3Q6T4P5 718 aa26.18■■□□□ 1.78
SDHAF3-202ENST00000432641 PMFBP1Q8TBY8 1022 aa26.17■■□□□ 1.78
SDHAF3-202ENST00000432641 RRS1Q15050 365 aaKnown RBP26.16■■□□□ 1.78
SDHAF3-202ENST00000432641 ADAMTSL3P82987 1691 aa26.16■■□□□ 1.78
SDHAF3-202ENST00000432641 ALDH1L2Q3SY69 923 aa26.16■■□□□ 1.78
SDHAF3-202ENST00000432641 HMOX1P09601 288 aa26.15■■□□□ 1.78
SDHAF3-202ENST00000432641 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
SDHAF3-202ENST00000432641 SMC4Q9NTJ3 1288 aa26.15■■□□□ 1.78
SDHAF3-202ENST00000432641 FMN2Q9NZ56 1722 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms