RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 SAMD9LQ8IVG5 1584 aa8.71□□□□□ -1.02
NIPAL3-205ENST00000432012 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
NIPAL3-205ENST00000432012 POM121CA8CG34 1229 aa8.71□□□□□ -1.02
NIPAL3-205ENST00000432012 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
NIPAL3-205ENST00000432012 PDIA6Q15084 440 aa8.7□□□□□ -1.02
NIPAL3-205ENST00000432012 ADGBQ8N7X0 1667 aa8.7□□□□□ -1.02
NIPAL3-205ENST00000432012 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
NIPAL3-205ENST00000432012 YTHDC1Q96MU7 727 aaKnown RBP8.7□□□□□ -1.02
NIPAL3-205ENST00000432012 SHPRHQ149N8 1683 aa8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 ABCC3O15438 1527 aa8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 SETBP1Q9Y6X0 1596 aa8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 PPP1R15BQ5SWA1 713 aa8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 SPAG9O60271 1321 aaKnown RBP8.69□□□□□ -1.02
NIPAL3-205ENST00000432012 ZNF579Q8NAF0 562 aaKnown RBP8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 GNPATO15228 680 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 RFX1P22670 979 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 TAF7LQ5H9L4 462 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 MIA2Q96PC5 1412 aa8.68□□□□□ -1.02
NIPAL3-205ENST00000432012 CERS3Q8IU89 383 aa8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 ZNF526Q8TF50 670 aaPredicted RBP8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 PLEKHH2Q8IVE3 1493 aa8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 RBM6P78332 1123 aaKnown RBP8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 COL16A1Q07092 1604 aaPredicted RBP8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 INO80Q9ULG1 1556 aaPredicted RBP8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 GGT6Q6P531 493 aa8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 TRPC6Q9Y210 931 aa8.67□□□□□ -1.02
NIPAL3-205ENST00000432012 PHOX2BQ99453 314 aa8.66□□□□□ -1.02
NIPAL3-205ENST00000432012 LRP6O75581 1613 aa8.66□□□□□ -1.02
NIPAL3-205ENST00000432012 KDM4AO75164 1064 aa8.66□□□□□ -1.02
NIPAL3-205ENST00000432012 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
NIPAL3-205ENST00000432012 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
NIPAL3-205ENST00000432012 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
NIPAL3-205ENST00000432012 SCAF11Q99590 1463 aaKnown RBP8.65□□□□□ -1.02
NIPAL3-205ENST00000432012 RGS12O14924 1447 aa8.65□□□□□ -1.02
NIPAL3-205ENST00000432012 NWD1Q149M9 1564 aa8.65□□□□□ -1.03
NIPAL3-205ENST00000432012 NUTM2BA6NNL0 878 aaPredicted RBP8.65□□□□□ -1.03
NIPAL3-205ENST00000432012 NUTM2EB1AL46 878 aaPredicted RBP8.65□□□□□ -1.03
NIPAL3-205ENST00000432012 NUTM2DQ5VT03 806 aaPredicted RBP8.65□□□□□ -1.03
NIPAL3-205ENST00000432012 NUTM2AQ8IVF1 878 aaPredicted RBP8.65□□□□□ -1.03
NIPAL3-205ENST00000432012 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.03
NIPAL3-205ENST00000432012 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
NIPAL3-205ENST00000432012 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
NIPAL3-205ENST00000432012 FMN1Q68DA7 1419 aa8.64□□□□□ -1.03
NIPAL3-205ENST00000432012 MSH6P52701 1360 aa8.64□□□□□ -1.03
NIPAL3-205ENST00000432012 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
NIPAL3-205ENST00000432012 KIAA1107Q9UPP5 1409 aa8.64□□□□□ -1.03
NIPAL3-205ENST00000432012 NKTRP30414 1462 aaKnown RBP8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 SOX12O15370 315 aa8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 DSG2Q14126 1118 aa8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 GLMNQ92990 594 aa8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 CALR3Q96L12 384 aaKnown RBP8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 NHSL1Q5SYE7 1610 aa8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 TMEM94Q12767 1356 aa8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 CD44P16070 742 aaKnown RBP8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 AHDC1Q5TGY3 1603 aaPredicted RBP8.63□□□□□ -1.03
NIPAL3-205ENST00000432012 VPS8Q8N3P4 1428 aa8.62□□□□□ -1.03
NIPAL3-205ENST00000432012 MAP3K1Q13233 1512 aa8.62□□□□□ -1.03
NIPAL3-205ENST00000432012 OSBPP22059 807 aa8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 TIAM1Q13009 1591 aa8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 SLIT1O75093 1534 aa8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 KCNA6P17658 529 aa8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-205ENST00000432012 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 CCDC136Q96JN2 1154 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 AFF2P51816 1311 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 RTEL1-TNFRSF6BF6WH68 1400 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 ARHGAP23Q9P227 1491 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 EID1Q9Y6B2 187 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 NCOA3Q9Y6Q9 1424 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 DDX12PQ92771 950 aa8.6□□□□□ -1.03
NIPAL3-205ENST00000432012 CDC42BPAQ5VT25 1732 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 SYCP2Q9BX26 1530 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 YY1P25490 414 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 HIC1Q14526 733 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 MTMR14Q8NCE2 650 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 ADAMTS19Q8TE59 1207 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
NIPAL3-205ENST00000432012 UBR1Q8IWV7 1749 aa8.58□□□□□ -1.04
NIPAL3-205ENST00000432012 DHX29Q7Z478 1369 aaKnown RBP8.58□□□□□ -1.04
NIPAL3-205ENST00000432012 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
NIPAL3-205ENST00000432012 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
NIPAL3-205ENST00000432012 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
NIPAL3-205ENST00000432012 GPHNQ9NQX3 736 aaPredicted RBP8.58□□□□□ -1.04
NIPAL3-205ENST00000432012 KDM5AP29375 1690 aaKnown RBP8.57□□□□□ -1.04
NIPAL3-205ENST00000432012 WASHC2CQ9Y4E1 1318 aa8.57□□□□□ -1.04
NIPAL3-205ENST00000432012 ABL2P42684 1182 aa8.57□□□□□ -1.04
NIPAL3-205ENST00000432012 CLSPNQ9HAW4 1339 aa8.57□□□□□ -1.04
NIPAL3-205ENST00000432012 BRD1O95696 1058 aa8.57□□□□□ -1.04
NIPAL3-205ENST00000432012 KIAA1522Q9P206 1035 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms