RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ANKARQ7Z5J8 1434 aa16.94■□□□□ 0.3
DDX56-204ENST00000431640 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
DDX56-204ENST00000431640 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
DDX56-204ENST00000431640 MST1RQ04912 1400 aa16.93■□□□□ 0.3
DDX56-204ENST00000431640 MON2Q7Z3U7 1717 aa16.93■□□□□ 0.3
DDX56-204ENST00000431640 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
DDX56-204ENST00000431640 NUDT16Q96DE0 195 aaKnown RBP16.93■□□□□ 0.3
DDX56-204ENST00000431640 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
DDX56-204ENST00000431640 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
DDX56-204ENST00000431640 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
DDX56-204ENST00000431640 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
DDX56-204ENST00000431640 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
DDX56-204ENST00000431640 GOLGA2Q08379 1002 aa16.89■□□□□ 0.3
DDX56-204ENST00000431640 C14orf37Q86TY3 774 aa16.89■□□□□ 0.3
DDX56-204ENST00000431640 CABP1Q9NZU7 370 aa16.89■□□□□ 0.3
DDX56-204ENST00000431640 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.29
DDX56-204ENST00000431640 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
DDX56-204ENST00000431640 ZNF521Q96K83 1311 aa16.88■□□□□ 0.29
DDX56-204ENST00000431640 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
DDX56-204ENST00000431640 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
DDX56-204ENST00000431640 MSH6P52701 1360 aa16.87■□□□□ 0.29
DDX56-204ENST00000431640 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
DDX56-204ENST00000431640 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
DDX56-204ENST00000431640 KIF1AQ12756 1690 aa16.85■□□□□ 0.29
DDX56-204ENST00000431640 KIF20BQ96Q89 1820 aa16.84■□□□□ 0.29
DDX56-204ENST00000431640 SLFN5Q08AF3 891 aa16.84■□□□□ 0.29
DDX56-204ENST00000431640 PMFBP1Q8TBY8 1022 aa16.84■□□□□ 0.29
DDX56-204ENST00000431640 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
DDX56-204ENST00000431640 TRPM3Q9HCF6 1732 aaPredicted RBP16.83■□□□□ 0.28
DDX56-204ENST00000431640 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
DDX56-204ENST00000431640 APAF1O14727 1248 aa16.83■□□□□ 0.28
DDX56-204ENST00000431640 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
DDX56-204ENST00000431640 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
DDX56-204ENST00000431640 HDGFL2Q7Z4V5 671 aaPredicted RBP16.83■□□□□ 0.28
DDX56-204ENST00000431640 ACEP12821 1306 aa16.83■□□□□ 0.28
DDX56-204ENST00000431640 USP6P35125 1406 aa16.83■□□□□ 0.28
DDX56-204ENST00000431640 SSH2Q76I76 1423 aa16.83■□□□□ 0.28
DDX56-204ENST00000431640 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
DDX56-204ENST00000431640 ANKRD26Q9UPS8 1709 aa16.82■□□□□ 0.28
DDX56-204ENST00000431640 MARF1Q9Y4F3 1742 aaKnown RBP16.82■□□□□ 0.28
DDX56-204ENST00000431640 MTHFSP49914 203 aa16.81■□□□□ 0.28
DDX56-204ENST00000431640 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
DDX56-204ENST00000431640 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.81■□□□□ 0.28
DDX56-204ENST00000431640 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
DDX56-204ENST00000431640 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
DDX56-204ENST00000431640 E9PSI1 815 aa16.81■□□□□ 0.28
DDX56-204ENST00000431640 ATF3P18847 181 aa16.8■□□□□ 0.28
DDX56-204ENST00000431640 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
DDX56-204ENST00000431640 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
DDX56-204ENST00000431640 TNNT2P45379 298 aaPredicted RBP16.79■□□□□ 0.28
DDX56-204ENST00000431640 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
DDX56-204ENST00000431640 ROBO1Q9Y6N7 1651 aa16.79■□□□□ 0.28
DDX56-204ENST00000431640 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
DDX56-204ENST00000431640 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
DDX56-204ENST00000431640 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
DDX56-204ENST00000431640 DDX17Q92841 729 aaKnown RBP16.77■□□□□ 0.28
DDX56-204ENST00000431640 SHPRHQ149N8 1683 aa16.77■□□□□ 0.27
DDX56-204ENST00000431640 PXDNQ92626 1479 aa16.77■□□□□ 0.27
DDX56-204ENST00000431640 BRINP3Q76B58 766 aa16.77■□□□□ 0.27
DDX56-204ENST00000431640 USP54Q70EL1 1684 aa16.76■□□□□ 0.27
DDX56-204ENST00000431640 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
DDX56-204ENST00000431640 FYB1O15117 783 aa16.75■□□□□ 0.27
DDX56-204ENST00000431640 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
DDX56-204ENST00000431640 IQSEC2Q5JU85 1478 aa16.75■□□□□ 0.27
DDX56-204ENST00000431640 WDR63Q8IWG1 891 aa16.74■□□□□ 0.27
DDX56-204ENST00000431640 WWC1Q8IX03 1113 aa16.74■□□□□ 0.27
DDX56-204ENST00000431640 SLAIN2Q9P270 581 aa16.74■□□□□ 0.27
DDX56-204ENST00000431640 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
DDX56-204ENST00000431640 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
DDX56-204ENST00000431640 NME9Q86XW9 330 aa16.73■□□□□ 0.27
DDX56-204ENST00000431640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDX56-204ENST00000431640 NGDNQ8NEJ9 315 aaKnown RBP16.73■□□□□ 0.27
DDX56-204ENST00000431640 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
DDX56-204ENST00000431640 OVOS2A0A0J9YW53 1432 aa16.73■□□□□ 0.27
DDX56-204ENST00000431640 OVOS2Q6IE36 1432 aa16.73■□□□□ 0.27
DDX56-204ENST00000431640 FOXO3O43524 673 aa16.72■□□□□ 0.27
DDX56-204ENST00000431640 PNNQ9H307 717 aaKnown RBP16.72■□□□□ 0.27
DDX56-204ENST00000431640 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
DDX56-204ENST00000431640 GGNBP2Q9H3C7 697 aa16.72■□□□□ 0.27
DDX56-204ENST00000431640 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.27
DDX56-204ENST00000431640 PLIN1O60240 522 aa16.71■□□□□ 0.27
DDX56-204ENST00000431640 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
DDX56-204ENST00000431640 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
DDX56-204ENST00000431640 U2AF1L5P0DN76 240 aaPredicted RBP16.7■□□□□ 0.26
DDX56-204ENST00000431640 U2AF1Q01081 240 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX56-204ENST00000431640 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
DDX56-204ENST00000431640 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
DDX56-204ENST00000431640 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
DDX56-204ENST00000431640 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
DDX56-204ENST00000431640 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
DDX56-204ENST00000431640 MED1Q15648 1581 aaPredicted RBP16.67■□□□□ 0.26
DDX56-204ENST00000431640 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
DDX56-204ENST00000431640 TTC21AQ8NDW8 1320 aa16.66■□□□□ 0.26
DDX56-204ENST00000431640 PHRF1Q9P1Y6 1649 aaKnown RBP16.66■□□□□ 0.26
DDX56-204ENST00000431640 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
DDX56-204ENST00000431640 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
DDX56-204ENST00000431640 NPHP3Q7Z494 1330 aa16.65■□□□□ 0.26
DDX56-204ENST00000431640 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
DDX56-204ENST00000431640 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
DDX56-204ENST00000431640 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms