RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 GGNBP2Q9H3C7 697 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 ATP7BP35670 1465 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
CDC7-203ENST00000428239 NME9Q86XW9 330 aa9.58□□□□□ -0.88
CDC7-203ENST00000428239 ROBO1Q9Y6N7 1651 aa9.58□□□□□ -0.88
CDC7-203ENST00000428239 PRDM11Q9NQV5 511 aa9.58□□□□□ -0.88
CDC7-203ENST00000428239 JCADQ9P266 1359 aa9.58□□□□□ -0.88
CDC7-203ENST00000428239 WASHC2AQ641Q2 1341 aa9.57□□□□□ -0.88
CDC7-203ENST00000428239 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
CDC7-203ENST00000428239 XIRP1Q702N8 1843 aaKnown RBP9.57□□□□□ -0.88
CDC7-203ENST00000428239 CCDC7Q96M83 1385 aa9.57□□□□□ -0.88
CDC7-203ENST00000428239 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
CDC7-203ENST00000428239 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
CDC7-203ENST00000428239 ARHGEF10O15013 1369 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 NINLQ9Y2I6 1382 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 MORC1Q86VD1 984 aa9.56□□□□□ -0.88
CDC7-203ENST00000428239 EVA1CP58658 441 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 NSD3Q9BZ95 1437 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 FMN2Q9NZ56 1722 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 CHRNA2Q15822 529 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 STRN4Q9NRL3 753 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 ADGRB2O60241 1585 aa9.55□□□□□ -0.88
CDC7-203ENST00000428239 AMPHP49418 695 aa9.54□□□□□ -0.88
CDC7-203ENST00000428239 LTV1Q96GA3 475 aaPredicted RBP9.54□□□□□ -0.88
CDC7-203ENST00000428239 ANKRD36BQ8N2N9 1353 aa9.54□□□□□ -0.88
CDC7-203ENST00000428239 TTC21AQ8NDW8 1320 aa9.54□□□□□ -0.88
CDC7-203ENST00000428239 USP6P35125 1406 aa9.54□□□□□ -0.88
CDC7-203ENST00000428239 TNS3Q68CZ2 1445 aa9.54□□□□□ -0.88
CDC7-203ENST00000428239 USP35Q9P2H5 1018 aa9.54□□□□□ -0.88
CDC7-203ENST00000428239 PHLPP1O60346 1717 aa9.53□□□□□ -0.88
CDC7-203ENST00000428239 RGPD8O14715 1765 aaPredicted RBP9.53□□□□□ -0.88
CDC7-203ENST00000428239 POLR3AO14802 1390 aaPredicted RBP9.52□□□□□ -0.89
CDC7-203ENST00000428239 GCP02774 474 aa9.52□□□□□ -0.89
CDC7-203ENST00000428239 KCNH5Q8NCM2 988 aa9.52□□□□□ -0.89
CDC7-203ENST00000428239 SPATA31A6Q5VVP1 1343 aa9.52□□□□□ -0.89
CDC7-203ENST00000428239 SBNO1A3KN83 1393 aa9.52□□□□□ -0.89
CDC7-203ENST00000428239 PNPLA6Q8IY17 1366 aa9.52□□□□□ -0.89
CDC7-203ENST00000428239 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
CDC7-203ENST00000428239 EDC4Q6P2E9 1401 aaKnown RBP9.51□□□□□ -0.89
CDC7-203ENST00000428239 FBLN1P23142 703 aa9.51□□□□□ -0.89
CDC7-203ENST00000428239 KIF1AQ12756 1690 aa9.51□□□□□ -0.89
CDC7-203ENST00000428239 ITSN1Q15811 1721 aa9.51□□□□□ -0.89
CDC7-203ENST00000428239 RRS1Q15050 365 aaKnown RBP9.51□□□□□ -0.89
CDC7-203ENST00000428239 FYB1O15117 783 aa9.5□□□□□ -0.89
CDC7-203ENST00000428239 BTG4Q9NY30 223 aa9.49□□□□□ -0.89
CDC7-203ENST00000428239 USP21Q9UK80 565 aa9.49□□□□□ -0.89
CDC7-203ENST00000428239 USP32Q8NFA0 1604 aa9.49□□□□□ -0.89
CDC7-203ENST00000428239 KIAA0232Q92628 1395 aa9.49□□□□□ -0.89
CDC7-203ENST00000428239 PXDNQ92626 1479 aa9.48□□□□□ -0.89
CDC7-203ENST00000428239 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
CDC7-203ENST00000428239 AFF2P51816 1311 aa9.48□□□□□ -0.89
CDC7-203ENST00000428239 ANP32CO43423 234 aa9.48□□□□□ -0.89
CDC7-203ENST00000428239 TOM1L2Q6ZVM7 507 aa9.48□□□□□ -0.89
CDC7-203ENST00000428239 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
CDC7-203ENST00000428239 AHDC1Q5TGY3 1603 aaPredicted RBP9.47□□□□□ -0.89
CDC7-203ENST00000428239 BRD4O60885 1362 aaPredicted RBP9.47□□□□□ -0.89
CDC7-203ENST00000428239 FAM83GA6ND36 823 aa9.46□□□□□ -0.9
CDC7-203ENST00000428239 CFAP53Q96M91 514 aa9.46□□□□□ -0.9
CDC7-203ENST00000428239 EMILIN1Q9Y6C2 1016 aa9.46□□□□□ -0.9
CDC7-203ENST00000428239 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
CDC7-203ENST00000428239 ZNF772Q68DY9 489 aaPredicted RBP9.45□□□□□ -0.9
CDC7-203ENST00000428239 QTRT2Q9H974 415 aaKnown RBP9.45□□□□□ -0.9
CDC7-203ENST00000428239 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
CDC7-203ENST00000428239 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
CDC7-203ENST00000428239 MAP3K19Q56UN5 1328 aa9.44□□□□□ -0.9
CDC7-203ENST00000428239 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
CDC7-203ENST00000428239 TRPC5Q9UL62 973 aaPredicted RBP9.43□□□□□ -0.9
CDC7-203ENST00000428239 MTHFSP49914 203 aa9.43□□□□□ -0.9
CDC7-203ENST00000428239 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
CDC7-203ENST00000428239 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
CDC7-203ENST00000428239 UNC5CLQ8IV45 518 aa9.43□□□□□ -0.9
CDC7-203ENST00000428239 ANKRD24Q8TF21 1146 aa9.43□□□□□ -0.9
CDC7-203ENST00000428239 TOPAZ1Q8N9V7 1692 aa9.42□□□□□ -0.9
CDC7-203ENST00000428239 HSP90AB2PQ58FF8 381 aa9.42□□□□□ -0.9
CDC7-203ENST00000428239 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
CDC7-203ENST00000428239 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
CDC7-203ENST00000428239 RXRBP28702 533 aa9.42□□□□□ -0.9
CDC7-203ENST00000428239 USP19O94966 1318 aa9.42□□□□□ -0.9
CDC7-203ENST00000428239 NSD2O96028 1365 aa9.42□□□□□ -0.9
CDC7-203ENST00000428239 NEFMP07197 916 aa9.41□□□□□ -0.9
CDC7-203ENST00000428239 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
CDC7-203ENST00000428239 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
CDC7-203ENST00000428239 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
CDC7-203ENST00000428239 PER1O15534 1290 aaPredicted RBP9.41□□□□□ -0.9
CDC7-203ENST00000428239 NUDCQ9Y266 331 aa9.41□□□□□ -0.9
CDC7-203ENST00000428239 HOXC9P31274 260 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 LRP6O75581 1613 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 SSH2Q76I76 1423 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 RAPGEF4Q8WZA2 1011 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 IP6K1Q92551 441 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 POLKQ9UBT6 870 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
CDC7-203ENST00000428239 USP31Q70CQ4 1352 aa9.4□□□□□ -0.91
CDC7-203ENST00000428239 RALBP1Q15311 655 aa9.39□□□□□ -0.91
CDC7-203ENST00000428239 MED1Q15648 1581 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms