RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 XRN1Q8IZH2 1706 aaKnown RBP28.63■■■□□ 2.17
CNEP1R1-202ENST00000427478 U2AF1L5P0DN76 240 aaPredicted RBP28.62■■■□□ 2.17
CNEP1R1-202ENST00000427478 U2AF1Q01081 240 aaKnown RBP eCLIP28.62■■■□□ 2.17
CNEP1R1-202ENST00000427478 TSHZ2Q9NRE2 1034 aa28.61■■■□□ 2.17
CNEP1R1-202ENST00000427478 MAP2P11137 1827 aaKnown RBP28.6■■■□□ 2.17
CNEP1R1-202ENST00000427478 SPINK5Q9NQ38 1064 aaPredicted RBP28.6■■■□□ 2.17
CNEP1R1-202ENST00000427478 TCP11L2Q8N4U5 519 aa28.59■■■□□ 2.17
CNEP1R1-202ENST00000427478 NME9Q86XW9 330 aa28.58■■■□□ 2.17
CNEP1R1-202ENST00000427478 RRP7AQ9Y3A4 280 aaKnown RBP28.58■■■□□ 2.17
CNEP1R1-202ENST00000427478 NUTM2FA1L443 756 aa28.58■■■□□ 2.17
CNEP1R1-202ENST00000427478 TRMT2AQ8IZ69 625 aaKnown RBP28.58■■■□□ 2.17
CNEP1R1-202ENST00000427478 NEUROD2Q15784 382 aa28.57■■■□□ 2.16
CNEP1R1-202ENST00000427478 DMRT2Q9Y5R5 561 aa28.57■■■□□ 2.16
CNEP1R1-202ENST00000427478 U2SURPO15042 1029 aaKnown RBP28.57■■■□□ 2.16
CNEP1R1-202ENST00000427478 WWC1Q8IX03 1113 aa28.57■■■□□ 2.16
CNEP1R1-202ENST00000427478 NRKQ7Z2Y5 1582 aa28.56■■■□□ 2.16
CNEP1R1-202ENST00000427478 E9PSI1 815 aa28.55■■■□□ 2.16
CNEP1R1-202ENST00000427478 NKTRP30414 1462 aaKnown RBP28.55■■■□□ 2.16
CNEP1R1-202ENST00000427478 FBLN1P23142 703 aa28.55■■■□□ 2.16
CNEP1R1-202ENST00000427478 ZRANB1Q9UGI0 708 aa28.54■■■□□ 2.16
CNEP1R1-202ENST00000427478 PNPLA6Q8IY17 1366 aa28.54■■■□□ 2.16
CNEP1R1-202ENST00000427478 PLIN1O60240 522 aa28.54■■■□□ 2.16
CNEP1R1-202ENST00000427478 ZNF692Q9BU19 519 aaPredicted RBP28.54■■■□□ 2.16
CNEP1R1-202ENST00000427478 RGPD8O14715 1765 aaPredicted RBP28.52■■■□□ 2.16
CNEP1R1-202ENST00000427478 DIAPH1O60610 1272 aaKnown RBP28.52■■■□□ 2.16
CNEP1R1-202ENST00000427478 POLKQ9UBT6 870 aa28.52■■■□□ 2.16
CNEP1R1-202ENST00000427478 EXOC6Q8TAG9 804 aa28.51■■■□□ 2.15
CNEP1R1-202ENST00000427478 CCDC136Q96JN2 1154 aa28.51■■■□□ 2.15
CNEP1R1-202ENST00000427478 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.15
CNEP1R1-202ENST00000427478 PPM1GO15355 546 aaPredicted RBP28.51■■■□□ 2.15
CNEP1R1-202ENST00000427478 ACEP12821 1306 aa28.5■■■□□ 2.15
CNEP1R1-202ENST00000427478 PIK3R4Q99570 1358 aa28.49■■■□□ 2.15
CNEP1R1-202ENST00000427478 ANKLE2Q86XL3 938 aa28.49■■■□□ 2.15
CNEP1R1-202ENST00000427478 COG3Q96JB2 828 aa28.49■■■□□ 2.15
CNEP1R1-202ENST00000427478 PLEKHG3A1L390 1219 aa28.48■■■□□ 2.15
CNEP1R1-202ENST00000427478 KCNA6P17658 529 aa28.48■■■□□ 2.15
CNEP1R1-202ENST00000427478 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
CNEP1R1-202ENST00000427478 CHD2O14647 1828 aaKnown RBP28.47■■■□□ 2.15
CNEP1R1-202ENST00000427478 PLEKHF1Q96S99 279 aa28.46■■■□□ 2.15
CNEP1R1-202ENST00000427478 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
CNEP1R1-202ENST00000427478 USP6P35125 1406 aa28.45■■■□□ 2.15
CNEP1R1-202ENST00000427478 EMILIN1Q9Y6C2 1016 aa28.45■■■□□ 2.15
CNEP1R1-202ENST00000427478 AATKQ6ZMQ8 1374 aa28.45■■■□□ 2.14
CNEP1R1-202ENST00000427478 TTC21BQ7Z4L5 1316 aa28.44■■■□□ 2.14
CNEP1R1-202ENST00000427478 CDK12Q9NYV4 1490 aaPredicted RBP28.44■■■□□ 2.14
CNEP1R1-202ENST00000427478 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
CNEP1R1-202ENST00000427478 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
CNEP1R1-202ENST00000427478 WDR63Q8IWG1 891 aa28.42■■■□□ 2.14
CNEP1R1-202ENST00000427478 FMN2Q9NZ56 1722 aa28.41■■■□□ 2.14
CNEP1R1-202ENST00000427478 NCBP3Q53F19 620 aaKnown RBP28.41■■■□□ 2.14
CNEP1R1-202ENST00000427478 PMFBP1Q8TBY8 1022 aa28.4■■■□□ 2.14
CNEP1R1-202ENST00000427478 CRBNQ96SW2 442 aa28.4■■■□□ 2.14
CNEP1R1-202ENST00000427478 C20orf194Q5TEA3 1177 aa28.39■■■□□ 2.14
CNEP1R1-202ENST00000427478 NALCNQ8IZF0 1738 aa28.39■■■□□ 2.14
CNEP1R1-202ENST00000427478 RRS1Q15050 365 aaKnown RBP28.39■■■□□ 2.13
CNEP1R1-202ENST00000427478 OVOS2A0A0J9YW53 1432 aa28.38■■■□□ 2.13
CNEP1R1-202ENST00000427478 OVOS2Q6IE36 1432 aa28.38■■■□□ 2.13
CNEP1R1-202ENST00000427478 TMPOP42166 694 aaKnown RBP28.37■■■□□ 2.13
CNEP1R1-202ENST00000427478 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.36■■■□□ 2.13
CNEP1R1-202ENST00000427478 PNNQ9H307 717 aaKnown RBP28.36■■■□□ 2.13
CNEP1R1-202ENST00000427478 SSH2Q76I76 1423 aa28.36■■■□□ 2.13
CNEP1R1-202ENST00000427478 ANKARQ7Z5J8 1434 aa28.35■■■□□ 2.13
CNEP1R1-202ENST00000427478 FCHSD2O94868 740 aa28.34■■■□□ 2.13
CNEP1R1-202ENST00000427478 BCAR3O75815 825 aa28.33■■■□□ 2.13
CNEP1R1-202ENST00000427478 NGDNQ8NEJ9 315 aaKnown RBP28.33■■■□□ 2.13
CNEP1R1-202ENST00000427478 RSPH6AQ9H0K4 717 aa28.33■■■□□ 2.13
CNEP1R1-202ENST00000427478 IL13P35225 146 aa28.33■■■□□ 2.13
CNEP1R1-202ENST00000427478 NPHP4O75161 1426 aaPredicted RBP28.32■■■□□ 2.12
CNEP1R1-202ENST00000427478 PRKAR2BP31323 418 aa28.31■■■□□ 2.12
CNEP1R1-202ENST00000427478 TRIM35Q9UPQ4 493 aa28.31■■■□□ 2.12
CNEP1R1-202ENST00000427478 HMOX1P09601 288 aa28.3■■■□□ 2.12
CNEP1R1-202ENST00000427478 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
CNEP1R1-202ENST00000427478 MYH16Q9H6N6 1097 aa28.3■■■□□ 2.12
CNEP1R1-202ENST00000427478 RIPK4P57078 832 aa28.29■■■□□ 2.12
CNEP1R1-202ENST00000427478 PIK3C2AO00443 1686 aa28.28■■■□□ 2.12
CNEP1R1-202ENST00000427478 PEAK1Q9H792 1746 aa28.28■■■□□ 2.12
CNEP1R1-202ENST00000427478 RBM33Q96EV2 1170 aaKnown RBP28.27■■■□□ 2.12
CNEP1R1-202ENST00000427478 NEFMP07197 916 aa28.27■■■□□ 2.12
CNEP1R1-202ENST00000427478 USP31Q70CQ4 1352 aa28.26■■■□□ 2.12
CNEP1R1-202ENST00000427478 SOX12O15370 315 aa28.24■■■□□ 2.11
CNEP1R1-202ENST00000427478 FANCIQ9NVI1 1328 aa28.23■■■□□ 2.11
CNEP1R1-202ENST00000427478 TSR2Q969E8 191 aaKnown RBP28.22■■■□□ 2.11
CNEP1R1-202ENST00000427478 PHACTR3Q96KR7 559 aa28.22■■■□□ 2.11
CNEP1R1-202ENST00000427478 RBM19Q9Y4C8 960 aaKnown RBP28.22■■■□□ 2.11
CNEP1R1-202ENST00000427478 ADGRL3Q9HAR2 1447 aa28.21■■■□□ 2.11
CNEP1R1-202ENST00000427478 RARSP54136 660 aaKnown RBP28.21■■■□□ 2.11
CNEP1R1-202ENST00000427478 DLG5Q8TDM6 1919 aa28.2■■■□□ 2.1
CNEP1R1-202ENST00000427478 IL16Q14005 1332 aa28.19■■■□□ 2.1
CNEP1R1-202ENST00000427478 MARF1Q9Y4F3 1742 aaKnown RBP28.19■■■□□ 2.1
CNEP1R1-202ENST00000427478 EIF4A2Q14240 407 aaKnown RBP28.19■■■□□ 2.1
CNEP1R1-202ENST00000427478 NFE2L2Q16236 605 aa28.19■■■□□ 2.1
CNEP1R1-202ENST00000427478 CANXP27824 592 aaKnown RBP28.18■■■□□ 2.1
CNEP1R1-202ENST00000427478 NWD1Q149M9 1564 aa28.18■■■□□ 2.1
CNEP1R1-202ENST00000427478 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
CNEP1R1-202ENST00000427478 RGPD1P0DJD0 1748 aa28.16■■■□□ 2.1
CNEP1R1-202ENST00000427478 HSP90AB2PQ58FF8 381 aa28.15■■■□□ 2.1
CNEP1R1-202ENST00000427478 MAP3K19Q56UN5 1328 aa28.15■■■□□ 2.1
CNEP1R1-202ENST00000427478 FRAT1Q92837 279 aaPredicted RBP28.15■■■□□ 2.1
CNEP1R1-202ENST00000427478 BCL2L13Q9BXK5 485 aa28.15■■■□□ 2.1
CNEP1R1-202ENST00000427478 PHF8Q9UPP1 1060 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms