RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 WIPF1O43516 503 aa11.7□□□□□ -0.54
LINC00458-202ENST00000427299 BMP1P13497 986 aa11.7□□□□□ -0.54
LINC00458-202ENST00000427299 HRCP23327 699 aa11.7□□□□□ -0.54
LINC00458-202ENST00000427299 VARSP26640 1264 aaKnown RBP11.7□□□□□ -0.54
LINC00458-202ENST00000427299 TRIM46Q7Z4K8 759 aa11.7□□□□□ -0.54
LINC00458-202ENST00000427299 MPNDQ8N594 471 aa11.7□□□□□ -0.54
LINC00458-202ENST00000427299 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
LINC00458-202ENST00000427299 PRPF38BQ5VTL8 546 aaKnown RBP11.68□□□□□ -0.54
LINC00458-202ENST00000427299 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
LINC00458-202ENST00000427299 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
LINC00458-202ENST00000427299 CTHP32929 405 aa11.66□□□□□ -0.54
LINC00458-202ENST00000427299 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
LINC00458-202ENST00000427299 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
LINC00458-202ENST00000427299 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
LINC00458-202ENST00000427299 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
LINC00458-202ENST00000427299 NNTQ13423 1086 aa11.64□□□□□ -0.55
LINC00458-202ENST00000427299 PDE4DQ08499 809 aa11.63□□□□□ -0.55
LINC00458-202ENST00000427299 MYSM1Q5VVJ2 828 aa11.63□□□□□ -0.55
LINC00458-202ENST00000427299 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
LINC00458-202ENST00000427299 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
LINC00458-202ENST00000427299 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
LINC00458-202ENST00000427299 PER1O15534 1290 aaPredicted RBP11.61□□□□□ -0.55
LINC00458-202ENST00000427299 QPCTQ16769 361 aa11.61□□□□□ -0.55
LINC00458-202ENST00000427299 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
LINC00458-202ENST00000427299 FAM174AQ8TBP5 190 aa11.61□□□□□ -0.55
LINC00458-202ENST00000427299 FOXJ1Q92949 421 aa11.61□□□□□ -0.55
LINC00458-202ENST00000427299 ADH1CP00326 375 aa11.6□□□□□ -0.55
LINC00458-202ENST00000427299 CDK15Q96Q40 435 aa11.6□□□□□ -0.55
LINC00458-202ENST00000427299 KLF16Q9BXK1 252 aaPredicted RBP11.6□□□□□ -0.55
LINC00458-202ENST00000427299 TIMP2P16035 220 aa11.59□□□□□ -0.55
LINC00458-202ENST00000427299 ZFP42Q96MM3 310 aa11.59□□□□□ -0.55
LINC00458-202ENST00000427299 NXF1Q9UBU9 619 aaKnown RBP11.59□□□□□ -0.55
LINC00458-202ENST00000427299 LILRB3O75022 631 aa11.58□□□□□ -0.56
LINC00458-202ENST00000427299 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.56
LINC00458-202ENST00000427299 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
LINC00458-202ENST00000427299 WDR4P57081 412 aaKnown RBP11.56□□□□□ -0.56
LINC00458-202ENST00000427299 MRPL14Q6P1L8 145 aaKnown RBP11.56□□□□□ -0.56
LINC00458-202ENST00000427299 NPAS3Q8IXF0 933 aa11.56□□□□□ -0.56
LINC00458-202ENST00000427299 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
LINC00458-202ENST00000427299 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
LINC00458-202ENST00000427299 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
LINC00458-202ENST00000427299 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
LINC00458-202ENST00000427299 BPHLQ86WA6 291 aaPredicted RBP11.54□□□□□ -0.56
LINC00458-202ENST00000427299 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
LINC00458-202ENST00000427299 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
LINC00458-202ENST00000427299 TSC1Q92574 1164 aa11.54□□□□□ -0.56
LINC00458-202ENST00000427299 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
LINC00458-202ENST00000427299 H3BM21 787 aa11.52□□□□□ -0.57
LINC00458-202ENST00000427299 NR3C2P08235 984 aa11.52□□□□□ -0.57
LINC00458-202ENST00000427299 GRM5P41594 1212 aa11.52□□□□□ -0.57
LINC00458-202ENST00000427299 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
LINC00458-202ENST00000427299 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
LINC00458-202ENST00000427299 NR5A1Q13285 461 aa11.51□□□□□ -0.57
LINC00458-202ENST00000427299 AGERQ15109 404 aa11.51□□□□□ -0.57
LINC00458-202ENST00000427299 SH3RF1Q7Z6J0 888 aa11.51□□□□□ -0.57
LINC00458-202ENST00000427299 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
LINC00458-202ENST00000427299 C1QTNF2Q9BXJ5 285 aa11.51□□□□□ -0.57
LINC00458-202ENST00000427299 VEGFBP49765 207 aa11.5□□□□□ -0.57
LINC00458-202ENST00000427299 SCARF1Q14162 830 aa11.5□□□□□ -0.57
LINC00458-202ENST00000427299 ARMC2Q8NEN0 867 aa11.5□□□□□ -0.57
LINC00458-202ENST00000427299 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
LINC00458-202ENST00000427299 ITPKCQ96DU7 683 aa11.5□□□□□ -0.57
LINC00458-202ENST00000427299 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
LINC00458-202ENST00000427299 ZIC2O95409 532 aaPredicted RBP11.49□□□□□ -0.57
LINC00458-202ENST00000427299 GMPRP36959 345 aa11.49□□□□□ -0.57
LINC00458-202ENST00000427299 IRF7Q92985 503 aa11.49□□□□□ -0.57
LINC00458-202ENST00000427299 NBPF14Q5TI25 921 aa11.48□□□□□ -0.57
LINC00458-202ENST00000427299 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
LINC00458-202ENST00000427299 ERBB4Q15303 1308 aa11.47□□□□□ -0.57
LINC00458-202ENST00000427299 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
LINC00458-202ENST00000427299 TRMT44Q8IYL2 757 aaKnown RBP11.46□□□□□ -0.57
LINC00458-202ENST00000427299 MAP4K5Q9Y4K4 846 aa11.46□□□□□ -0.57
LINC00458-202ENST00000427299 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
LINC00458-202ENST00000427299 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
LINC00458-202ENST00000427299 LORP23490 312 aaPredicted RBP11.44□□□□□ -0.58
LINC00458-202ENST00000427299 FSHRP23945 695 aa11.43□□□□□ -0.58
LINC00458-202ENST00000427299 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
LINC00458-202ENST00000427299 MAGEB6P1A0A0J9YX57 407 aa11.41□□□□□ -0.58
LINC00458-202ENST00000427299 CTDSPL2Q05D32 466 aa11.41□□□□□ -0.58
LINC00458-202ENST00000427299 C6orf118Q5T5N4 469 aa11.41□□□□□ -0.58
LINC00458-202ENST00000427299 GPKOWQ92917 476 aaPredicted RBP eCLIP11.41□□□□□ -0.58
LINC00458-202ENST00000427299 VASH1Q7L8A9 365 aaPredicted RBP11.4□□□□□ -0.58
LINC00458-202ENST00000427299 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
LINC00458-202ENST00000427299 VSIG8P0DPA2 414 aa11.39□□□□□ -0.59
LINC00458-202ENST00000427299 MAN1A2O60476 641 aa11.38□□□□□ -0.59
LINC00458-202ENST00000427299 ERFEQ4G0M1 354 aa11.38□□□□□ -0.59
LINC00458-202ENST00000427299 FBXO31Q5XUX0 539 aaPredicted RBP11.38□□□□□ -0.59
LINC00458-202ENST00000427299 ZSCAN1Q8NBB4 408 aa11.38□□□□□ -0.59
LINC00458-202ENST00000427299 BMP2P12643 396 aa11.37□□□□□ -0.59
LINC00458-202ENST00000427299 CARD14Q9BXL6 1004 aa11.37□□□□□ -0.59
LINC00458-202ENST00000427299 UPP2O95045 317 aa11.36□□□□□ -0.59
LINC00458-202ENST00000427299 CCDC116Q8IYX3 515 aa11.36□□□□□ -0.59
LINC00458-202ENST00000427299 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
LINC00458-202ENST00000427299 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
LINC00458-202ENST00000427299 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
LINC00458-202ENST00000427299 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
LINC00458-202ENST00000427299 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
LINC00458-202ENST00000427299 LRRN4Q8WUT4 740 aa11.35□□□□□ -0.59
LINC00458-202ENST00000427299 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
LINC00458-202ENST00000427299 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms