RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, human

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFA-205	ENST00000426681	ADAMTS2	O95450	1211 aa		32.89	■■■□□ 2.86
PDGFA-205	ENST00000426681	SSH2	Q76I76	1423 aa		32.88	■■■□□ 2.85
PDGFA-205	ENST00000426681	NINL	Q9Y2I6	1382 aa		32.87	■■■□□ 2.85
PDGFA-205	ENST00000426681	CDCA8	Q53HL2	280 aa		32.87	■■■□□ 2.85
PDGFA-205	ENST00000426681	HSPA5	P11021	654 aa	Known RBP	32.86	■■■□□ 2.85
PDGFA-205	ENST00000426681	TMC1	Q8TDI8	760 aa		32.86	■■■□□ 2.85
PDGFA-205	ENST00000426681	CABLES1	Q8TDN4	633 aa		32.86	■■■□□ 2.85
PDGFA-205	ENST00000426681	SLC12A5	Q9H2X9	1139 aa		32.85	■■■□□ 2.85
PDGFA-205	ENST00000426681	ABCA3	Q99758	1704 aa		32.85	■■■□□ 2.85
PDGFA-205	ENST00000426681	MARF1	Q9Y4F3	1742 aa	Known RBP	32.85	■■■□□ 2.85
PDGFA-205	ENST00000426681	CD163L1	Q9NR16	1453 aa		32.84	■■■□□ 2.85
PDGFA-205	ENST00000426681	C8orf37	Q96NL8	207 aa		32.83	■■■□□ 2.85
PDGFA-205	ENST00000426681	ABTB2	Q8N961	1025 aa		32.82	■■■□□ 2.84
PDGFA-205	ENST00000426681	KTN1	Q86UP2	1357 aa	Known RBP	32.82	■■■□□ 2.84
PDGFA-205	ENST00000426681	NGLY1	Q96IV0	654 aa		32.81	■■■□□ 2.84
PDGFA-205	ENST00000426681	CRYBG1	Q9Y4K1	1723 aa		32.81	■■■□□ 2.84
PDGFA-205	ENST00000426681	MON2	Q7Z3U7	1717 aa		32.8	■■■□□ 2.84
PDGFA-205	ENST00000426681	HAP1	P54257	671 aa	Predicted RBP	32.8	■■■□□ 2.84
PDGFA-205	ENST00000426681	TERF2IP	Q9NYB0	399 aa		32.8	■■■□□ 2.84
PDGFA-205	ENST00000426681	ZNF772	Q68DY9	489 aa	Predicted RBP	32.79	■■■□□ 2.84
PDGFA-205	ENST00000426681	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.79	■■■□□ 2.84
PDGFA-205	ENST00000426681	AFF2	P51816	1311 aa		32.78	■■■□□ 2.84
PDGFA-205	ENST00000426681	TTC21B	Q7Z4L5	1316 aa		32.77	■■■□□ 2.84
PDGFA-205	ENST00000426681	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.77	■■■□□ 2.84
PDGFA-205	ENST00000426681	NRK	Q7Z2Y5	1582 aa		32.77	■■■□□ 2.84
PDGFA-205	ENST00000426681	TTC21A	Q8NDW8	1320 aa		32.77	■■■□□ 2.84
PDGFA-205	ENST00000426681	PLEKHG5	O94827	1062 aa		32.76	■■■□□ 2.83
PDGFA-205	ENST00000426681	NUTM2G	Q5VZR2	741 aa		32.76	■■■□□ 2.83
PDGFA-205	ENST00000426681		A0A1W2PP64	1363 aa		32.75	■■■□□ 2.83
PDGFA-205	ENST00000426681	POTEA	Q6S8J7	498 aa		32.75	■■■□□ 2.83
PDGFA-205	ENST00000426681	NLRP13	Q86W25	1043 aa		32.75	■■■□□ 2.83
PDGFA-205	ENST00000426681	USP19	O94966	1318 aa		32.74	■■■□□ 2.83
PDGFA-205	ENST00000426681	PIK3C2A	O00443	1686 aa		32.72	■■■□□ 2.83
PDGFA-205	ENST00000426681	EDC4	Q6P2E9	1401 aa	Known RBP	32.71	■■■□□ 2.83
PDGFA-205	ENST00000426681	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.71	■■■□□ 2.83
PDGFA-205	ENST00000426681	ILDR2	Q71H61	639 aa		32.71	■■■□□ 2.83
PDGFA-205	ENST00000426681	ANKRD36B	Q8N2N9	1353 aa		32.7	■■■□□ 2.83
PDGFA-205	ENST00000426681	NLRP6	P59044	892 aa		32.7	■■■□□ 2.83
PDGFA-205	ENST00000426681	SLIT2	O94813	1529 aa		32.68	■■■□□ 2.82
PDGFA-205	ENST00000426681	USP21	Q9UK80	565 aa		32.68	■■■□□ 2.82
PDGFA-205	ENST00000426681	FAM83G	A6ND36	823 aa		32.67	■■■□□ 2.82
PDGFA-205	ENST00000426681	BCL9L	Q86UU0	1499 aa		32.67	■■■□□ 2.82
PDGFA-205	ENST00000426681	MYOM1	P52179	1685 aa		32.66	■■■□□ 2.82
PDGFA-205	ENST00000426681	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
PDGFA-205	ENST00000426681	SLIT3	O75094	1523 aa		32.64	■■■□□ 2.82
PDGFA-205	ENST00000426681	GC	P02774	474 aa		32.64	■■■□□ 2.82
PDGFA-205	ENST00000426681	USP31	Q70CQ4	1352 aa		32.63	■■■□□ 2.81
PDGFA-205	ENST00000426681	QTRT2	Q9H974	415 aa	Known RBP	32.63	■■■□□ 2.81
PDGFA-205	ENST00000426681	COL14A1	Q05707	1796 aa	Known RBP	32.63	■■■□□ 2.81
PDGFA-205	ENST00000426681	NWD2	Q9ULI1	1742 aa		32.62	■■■□□ 2.81
PDGFA-205	ENST00000426681	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.61	■■■□□ 2.81
PDGFA-205	ENST00000426681	PLCH1	Q4KWH8	1693 aa		32.61	■■■□□ 2.81
PDGFA-205	ENST00000426681	CPD	O75976	1380 aa		32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	KIAA0232	Q92628	1395 aa		32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	USP54	Q70EL1	1684 aa		32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	C11orf95	C9JLR9	678 aa	Predicted RBP	32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	UNC5CL	Q8IV45	518 aa		32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	PRDM11	Q9NQV5	511 aa		32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	TRPC5	Q9UL62	973 aa	Predicted RBP	32.6	■■■□□ 2.81
PDGFA-205	ENST00000426681	NME9	Q86XW9	330 aa		32.59	■■■□□ 2.81
PDGFA-205	ENST00000426681	ATRN	O75882	1429 aa		32.59	■■■□□ 2.81
PDGFA-205	ENST00000426681	ZC3H6	P61129	1189 aa	Known RBP	32.58	■■■□□ 2.81
PDGFA-205	ENST00000426681	RXRB	P28702	533 aa		32.56	■■■□□ 2.8
PDGFA-205	ENST00000426681	KCNH5	Q8NCM2	988 aa		32.56	■■■□□ 2.8
PDGFA-205	ENST00000426681	ZRANB1	Q9UGI0	708 aa		32.56	■■■□□ 2.8
PDGFA-205	ENST00000426681	POLR3GL	Q9BT43	218 aa		32.55	■■■□□ 2.8
PDGFA-205	ENST00000426681	RBM6	P78332	1123 aa	Known RBP	32.54	■■■□□ 2.8
PDGFA-205	ENST00000426681	CARD14	Q9BXL6	1004 aa		32.53	■■■□□ 2.8
PDGFA-205	ENST00000426681	BTG4	Q9NY30	223 aa		32.53	■■■□□ 2.8
PDGFA-205	ENST00000426681	NRAP	Q86VF7	1730 aa		32.51	■■■□□ 2.8
PDGFA-205	ENST00000426681	CHRNA2	Q15822	529 aa		32.51	■■■□□ 2.79
PDGFA-205	ENST00000426681	OVOS2	A0A0J9YW53	1432 aa		32.51	■■■□□ 2.79
PDGFA-205	ENST00000426681	OVOS2	Q6IE36	1432 aa		32.51	■■■□□ 2.79
PDGFA-205	ENST00000426681	KIF7	Q2M1P5	1343 aa		32.5	■■■□□ 2.79
PDGFA-205	ENST00000426681	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.49	■■■□□ 2.79
PDGFA-205	ENST00000426681	VPS72	Q15906	364 aa		32.49	■■■□□ 2.79
PDGFA-205	ENST00000426681	NFAT5	O94916	1531 aa		32.49	■■■□□ 2.79
PDGFA-205	ENST00000426681	LMO7	Q8WWI1	1683 aa		32.47	■■■□□ 2.79
PDGFA-205	ENST00000426681	FYB1	O15117	783 aa		32.47	■■■□□ 2.79
PDGFA-205	ENST00000426681	ARHGEF25	Q86VW2	580 aa		32.47	■■■□□ 2.79
PDGFA-205	ENST00000426681	GJD4	Q96KN9	370 aa	Predicted RBP	32.47	■■■□□ 2.79
PDGFA-205	ENST00000426681	AATK	Q6ZMQ8	1374 aa		32.46	■■■□□ 2.79
PDGFA-205	ENST00000426681	NSD3	Q9BZ95	1437 aa		32.45	■■■□□ 2.79
PDGFA-205	ENST00000426681	COG3	Q96JB2	828 aa		32.45	■■■□□ 2.79
PDGFA-205	ENST00000426681	CAMTA1	Q9Y6Y1	1673 aa		32.44	■■■□□ 2.78
PDGFA-205	ENST00000426681	PANK3	Q9H999	370 aa		32.43	■■■□□ 2.78
PDGFA-205	ENST00000426681	COL18A1	P39060	1754 aa		32.42	■■■□□ 2.78
PDGFA-205	ENST00000426681	SOX12	O15370	315 aa		32.42	■■■□□ 2.78
PDGFA-205	ENST00000426681	KIF20B	Q96Q89	1820 aa		32.42	■■■□□ 2.78
PDGFA-205	ENST00000426681	GLI3	P10071	1580 aa		32.41	■■■□□ 2.78
PDGFA-205	ENST00000426681	ZEB1	P37275	1124 aa	Predicted RBP	32.39	■■■□□ 2.78
PDGFA-205	ENST00000426681	GGNBP2	Q9H3C7	697 aa		32.39	■■■□□ 2.78
PDGFA-205	ENST00000426681	CCDC7	Q96M83	1385 aa		32.39	■■■□□ 2.78
PDGFA-205	ENST00000426681	CGNL1	Q0VF96	1302 aa		32.38	■■■□□ 2.77
PDGFA-205	ENST00000426681	ZBTB7C	A1YPR0	619 aa		32.38	■■■□□ 2.77
PDGFA-205	ENST00000426681	ABCC6	O95255	1503 aa		32.37	■■■□□ 2.77
PDGFA-205	ENST00000426681	WASHC2A	Q641Q2	1341 aa		32.37	■■■□□ 2.77
PDGFA-205	ENST00000426681	EVA1C	P58658	441 aa		32.37	■■■□□ 2.77
PDGFA-205	ENST00000426681	CCDC9	Q9Y3X0	531 aa	Known RBP	32.37	■■■□□ 2.77
PDGFA-205	ENST00000426681	RGS12	O14924	1447 aa		32.36	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms