RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 LETM1O95202 739 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 NEK4P51957 841 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 CAVIN1Q6NZI2 390 aaKnown RBP21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 CDCA7LQ96GN5 454 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 HIP1O00291 1037 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 CDK5RAP3Q96JB5 506 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 TRIM5Q9C035 493 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 TWISTNBQ3B726 338 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 PPP2R1AP30153 589 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 MRE11P49959 708 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 KINO60870 393 aaKnown RBP21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 TMEM132AQ24JP5 1023 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 CNNM1Q9NRU3 951 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 CFAP70Q5T0N1 1121 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 ERC1Q8IUD2 1116 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 NOB1Q9ULX3 412 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 GNAI2P04899 355 aa21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 TSPY26PQ9H489 355 aa21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 MAGEC2Q9UBF1 373 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 TRAK2O60296 914 aa21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 PRPF40AO75400 957 aaKnown RBP21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 ZNF396Q96N95 335 aaPredicted RBP21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 WASHC2AQ641Q2 1341 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 TXLNAP40222 546 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 FILIP1LQ4L180 1135 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 IGF1RP08069 1367 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 ZNF428Q96B54 188 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 PRAM1Q96QH2 718 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 STK11IPQ8N1F8 1099 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 SMARCE1Q969G3 411 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 SKIDA1Q1XH10 827 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 KRT18P05783 430 aaKnown RBP21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 TSR2Q969E8 191 aaKnown RBP21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 MCM2P49736 904 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 PDCP20941 246 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 STK38Q15208 465 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 FIBPO43427 364 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 MBD3O95983 291 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 RABEP1Q15276 862 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 TXNDC2Q86VQ3 553 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 CCAR1Q8IX12 1150 aaKnown RBP21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 STK3Q13188 491 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 NOM1Q5C9Z4 860 aaKnown RBP21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 SIL1Q9H173 461 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 GNL3LQ9NVN8 582 aaKnown RBP21.39■■□□□ 1.02
ARHGEF28-203ENST00000426542 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 NCOA2Q15596 1464 aa21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 ATP2B2Q01814 1243 aa21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 ERCC4Q92889 916 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 MYO6Q9UM54 1294 aa21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 RDXP35241 583 aaKnown RBP21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 PROSER2Q86WR7 435 aaPredicted RBP21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 CABP4P57796 275 aa21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
ARHGEF28-203ENST00000426542 WWC2Q6AWC2 1192 aa21.37■■□□□ 1.01
ARHGEF28-203ENST00000426542 SYCP1Q15431 976 aa21.37■■□□□ 1.01
ARHGEF28-203ENST00000426542 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 LRRCC1Q9C099 1032 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 BCAR3O75815 825 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 SPC24Q8NBT2 197 aa21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 CDK19Q9BWU1 502 aa21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 CCP110O43303 1012 aa21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 MYL6BP14649 208 aa21.34■■□□□ 1.01
ARHGEF28-203ENST00000426542 DCTN1Q14203 1278 aa21.34■■□□□ 1.01
ARHGEF28-203ENST00000426542 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.011e-6■■□□□ 14.2
ARHGEF28-203ENST00000426542 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 KIF21BO75037 1637 aa21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 SCAPERQ9BY12 1400 aa21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1
ARHGEF28-203ENST00000426542 SERPINC1P01008 464 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 PDE3AQ14432 1141 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 JMYQ8N9B5 988 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 MAP7D2Q96T17 732 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 PPP1R1BQ9UD71 204 aaPredicted RBP21.31■■□□□ 1
ARHGEF28-203ENST00000426542 TOM1L2Q6ZVM7 507 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms