RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 LETM1O95202 739 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 NEK4P51957 841 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 CAVIN1Q6NZI2 390 aaKnown RBP21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 CDCA7LQ96GN5 454 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 HIP1O00291 1037 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 CDK5RAP3Q96JB5 506 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 TRIM5Q9C035 493 aa21.48■■□□□ 1.03
ARHGEF28-203ENST00000426542 TWISTNBQ3B726 338 aaPredicted RBP21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 PPP2R1AP30153 589 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 MRE11P49959 708 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 KINO60870 393 aaKnown RBP21.47■■□□□ 1.03
ARHGEF28-203ENST00000426542 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 TMEM132AQ24JP5 1023 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 CNNM1Q9NRU3 951 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 CFAP70Q5T0N1 1121 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 ERC1Q8IUD2 1116 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 NOB1Q9ULX3 412 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
ARHGEF28-203ENST00000426542 GNAI2P04899 355 aa21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 TSPY26PQ9H489 355 aa21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 MAGEC2Q9UBF1 373 aaPredicted RBP21.45■■□□□ 1.02
ARHGEF28-203ENST00000426542 TRAK2O60296 914 aa21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 PRPF40AO75400 957 aaKnown RBP21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
ARHGEF28-203ENST00000426542 ZNF396Q96N95 335 aaPredicted RBP21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 WASHC2AQ641Q2 1341 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 TXLNAP40222 546 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 FILIP1LQ4L180 1135 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 IGF1RP08069 1367 aa21.43■■□□□ 1.02
ARHGEF28-203ENST00000426542 ZNF428Q96B54 188 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 PRAM1Q96QH2 718 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 STK11IPQ8N1F8 1099 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 SMARCE1Q969G3 411 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 SKIDA1Q1XH10 827 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
ARHGEF28-203ENST00000426542 KRT18P05783 430 aaKnown RBP21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 TSR2Q969E8 191 aaKnown RBP21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 MCM2P49736 904 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 PDCP20941 246 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 STK38Q15208 465 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 FIBPO43427 364 aa21.41■■□□□ 1.02
ARHGEF28-203ENST00000426542 MBD3O95983 291 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 RABEP1Q15276 862 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 TXNDC2Q86VQ3 553 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 CCAR1Q8IX12 1150 aaKnown RBP21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 STK3Q13188 491 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 NOM1Q5C9Z4 860 aaKnown RBP21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 SIL1Q9H173 461 aa21.4■■□□□ 1.02
ARHGEF28-203ENST00000426542 GNL3LQ9NVN8 582 aaKnown RBP21.39■■□□□ 1.02
ARHGEF28-203ENST00000426542 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 NCOA2Q15596 1464 aa21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 ATP2B2Q01814 1243 aa21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 ERCC4Q92889 916 aaPredicted RBP21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 MYO6Q9UM54 1294 aa21.39■■□□□ 1.01
ARHGEF28-203ENST00000426542 RDXP35241 583 aaKnown RBP21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 HDGFL1Q5TGJ6 251 aa21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 PROSER2Q86WR7 435 aaPredicted RBP21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 CABP4P57796 275 aa21.38■■□□□ 1.01
ARHGEF28-203ENST00000426542 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
ARHGEF28-203ENST00000426542 WWC2Q6AWC2 1192 aa21.37■■□□□ 1.01
ARHGEF28-203ENST00000426542 SYCP1Q15431 976 aa21.37■■□□□ 1.01
ARHGEF28-203ENST00000426542 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 LRRCC1Q9C099 1032 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 BCAR3O75815 825 aa21.36■■□□□ 1.01
ARHGEF28-203ENST00000426542 SPC24Q8NBT2 197 aa21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 CDK19Q9BWU1 502 aa21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 CCP110O43303 1012 aa21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
ARHGEF28-203ENST00000426542 MYL6BP14649 208 aa21.34■■□□□ 1.01
ARHGEF28-203ENST00000426542 DCTN1Q14203 1278 aa21.34■■□□□ 1.01
ARHGEF28-203ENST00000426542 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.011e-6■■□□□ 14.2
ARHGEF28-203ENST00000426542 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 KIF21BO75037 1637 aa21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 SCAPERQ9BY12 1400 aa21.33■■□□□ 1.01
ARHGEF28-203ENST00000426542 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1
ARHGEF28-203ENST00000426542 SERPINC1P01008 464 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 PDE3AQ14432 1141 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 JMYQ8N9B5 988 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 MAP7D2Q96T17 732 aa21.32■■□□□ 1
ARHGEF28-203ENST00000426542 PPP1R1BQ9UD71 204 aaPredicted RBP21.31■■□□□ 1
ARHGEF28-203ENST00000426542 TOM1L2Q6ZVM7 507 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms