RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-209	ENST00000425836		A0A1W2PP64	1363 aa		33.99	■■■■□ 3.03
VEGFA-209	ENST00000425836	SPATA31A6	Q5VVP1	1343 aa		33.98	■■■■□ 3.03
VEGFA-209	ENST00000425836	ARHGEF10	O15013	1369 aa		33.97	■■■■□ 3.03
VEGFA-209	ENST00000425836	SHPRH	Q149N8	1683 aa		33.97	■■■■□ 3.03
VEGFA-209	ENST00000425836	TTC21B	Q7Z4L5	1316 aa		33.96	■■■■□ 3.03
VEGFA-209	ENST00000425836	ANKRD36B	Q8N2N9	1353 aa		33.95	■■■■□ 3.03
VEGFA-209	ENST00000425836	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.92	■■■■□ 3.02
VEGFA-209	ENST00000425836	NUTM2E	B1AL46	878 aa	Predicted RBP	33.92	■■■■□ 3.02
VEGFA-209	ENST00000425836	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.92	■■■■□ 3.02
VEGFA-209	ENST00000425836	ABTB2	Q8N961	1025 aa		33.92	■■■■□ 3.02
VEGFA-209	ENST00000425836	AKAP12	Q02952	1782 aa		33.92	■■■■□ 3.02
VEGFA-209	ENST00000425836	WASHC2A	Q641Q2	1341 aa		33.91	■■■■□ 3.02
VEGFA-209	ENST00000425836	ALS2	Q96Q42	1657 aa		33.9	■■■■□ 3.02
VEGFA-209	ENST00000425836	NUTM2G	Q5VZR2	741 aa		33.9	■■■■□ 3.02
VEGFA-209	ENST00000425836	CCDC7	Q96M83	1385 aa		33.9	■■■■□ 3.02
VEGFA-209	ENST00000425836	TTC21A	Q8NDW8	1320 aa		33.89	■■■■□ 3.02
VEGFA-209	ENST00000425836	PLEKHG5	O94827	1062 aa		33.89	■■■■□ 3.02
VEGFA-209	ENST00000425836	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.89	■■■■□ 3.02
VEGFA-209	ENST00000425836	CABLES1	Q8TDN4	633 aa		33.89	■■■■□ 3.02
VEGFA-209	ENST00000425836	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.89	■■■■□ 3.02
VEGFA-209	ENST00000425836	MYOM1	P52179	1685 aa		33.89	■■■■□ 3.01
VEGFA-209	ENST00000425836	EDC4	Q6P2E9	1401 aa	Known RBP	33.88	■■■■□ 3.01
VEGFA-209	ENST00000425836	CARD14	Q9BXL6	1004 aa		33.86	■■■■□ 3.01
VEGFA-209	ENST00000425836	MON2	Q7Z3U7	1717 aa		33.86	■■■■□ 3.01
VEGFA-209	ENST00000425836	LRP6	O75581	1613 aa		33.85	■■■■□ 3.01
VEGFA-209	ENST00000425836	NRK	Q7Z2Y5	1582 aa		33.84	■■■■□ 3.01
VEGFA-209	ENST00000425836	NLRP6	P59044	892 aa		33.84	■■■■□ 3.01
VEGFA-209	ENST00000425836	NLRP13	Q86W25	1043 aa		33.83	■■■■□ 3.01
VEGFA-209	ENST00000425836	PANK3	Q9H999	370 aa		33.83	■■■■□ 3.01
VEGFA-209	ENST00000425836	NME9	Q86XW9	330 aa		33.82	■■■■□ 3
VEGFA-209	ENST00000425836	ADAMTS2	O95450	1211 aa		33.8	■■■■□ 3
VEGFA-209	ENST00000425836	MED1	Q15648	1581 aa	Predicted RBP	33.8	■■■■□ 3
VEGFA-209	ENST00000425836	HAP1	P54257	671 aa	Predicted RBP	33.79	■■■■□ 3
VEGFA-209	ENST00000425836	ZRANB1	Q9UGI0	708 aa		33.79	■■■■□ 3
VEGFA-209	ENST00000425836	USP19	O94966	1318 aa		33.78	■■■■□ 3
VEGFA-209	ENST00000425836	NSD3	Q9BZ95	1437 aa		33.77	■■■■□ 3
VEGFA-209	ENST00000425836	MEX3C	Q5U5Q3	659 aa	Known RBP	33.77	■■■■□ 3
VEGFA-209	ENST00000425836	PIK3C2A	O00443	1686 aa		33.76	■■■■□ 3
VEGFA-209	ENST00000425836	USP31	Q70CQ4	1352 aa		33.76	■■■□□ 2.99
VEGFA-209	ENST00000425836	FYB1	O15117	783 aa		33.72	■■■□□ 2.99
VEGFA-209	ENST00000425836	GC	P02774	474 aa		33.72	■■■□□ 2.99
VEGFA-209	ENST00000425836	C8orf37	Q96NL8	207 aa		33.69	■■■□□ 2.98
VEGFA-209	ENST00000425836	GGNBP2	Q9H3C7	697 aa		33.68	■■■□□ 2.98
VEGFA-209	ENST00000425836	CRYBG1	Q9Y4K1	1723 aa		33.67	■■■□□ 2.98
VEGFA-209	ENST00000425836	ABCA3	Q99758	1704 aa		33.67	■■■□□ 2.98
VEGFA-209	ENST00000425836	OVOS2	A0A0J9YW53	1432 aa		33.67	■■■□□ 2.98
VEGFA-209	ENST00000425836	OVOS2	Q6IE36	1432 aa		33.67	■■■□□ 2.98
VEGFA-209	ENST00000425836	ZC3H6	P61129	1189 aa	Known RBP	33.66	■■■□□ 2.98
VEGFA-209	ENST00000425836	NGLY1	Q96IV0	654 aa		33.66	■■■□□ 2.98
VEGFA-209	ENST00000425836	COG3	Q96JB2	828 aa		33.66	■■■□□ 2.98
VEGFA-209	ENST00000425836	CGNL1	Q0VF96	1302 aa		33.66	■■■□□ 2.98
VEGFA-209	ENST00000425836	SLIT3	O75094	1523 aa		33.66	■■■□□ 2.98
VEGFA-209	ENST00000425836	FAM83G	A6ND36	823 aa		33.64	■■■□□ 2.98
VEGFA-209	ENST00000425836	KCNH5	Q8NCM2	988 aa		33.64	■■■□□ 2.98
VEGFA-209	ENST00000425836	KNSTRN	Q9Y448	316 aa		33.64	■■■□□ 2.98
VEGFA-209	ENST00000425836	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.63	■■■□□ 2.97
VEGFA-209	ENST00000425836	KIAA0232	Q92628	1395 aa		33.63	■■■□□ 2.97
VEGFA-209	ENST00000425836	SOX12	O15370	315 aa		33.63	■■■□□ 2.97
VEGFA-209	ENST00000425836	PER1	O15534	1290 aa	Predicted RBP	33.63	■■■□□ 2.97
VEGFA-209	ENST00000425836	PHF23	Q9BUL5	403 aa	Predicted RBP	33.62	■■■□□ 2.97
VEGFA-209	ENST00000425836	MARF1	Q9Y4F3	1742 aa	Known RBP	33.61	■■■□□ 2.97
VEGFA-209	ENST00000425836	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.6	■■■□□ 2.97
VEGFA-209	ENST00000425836	PRDM11	Q9NQV5	511 aa		33.6	■■■□□ 2.97
VEGFA-209	ENST00000425836	CPD	O75976	1380 aa		33.6	■■■□□ 2.97
VEGFA-209	ENST00000425836	AFF2	P51816	1311 aa		33.6	■■■□□ 2.97
VEGFA-209	ENST00000425836	USP54	Q70EL1	1684 aa		33.6	■■■□□ 2.97
VEGFA-209	ENST00000425836	RGS17	Q9UGC6	210 aa	Predicted RBP	33.59	■■■□□ 2.97
VEGFA-209	ENST00000425836	CHRNA2	Q15822	529 aa		33.57	■■■□□ 2.96
VEGFA-209	ENST00000425836	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.55	■■■□□ 2.96
VEGFA-209	ENST00000425836	NFAT5	O94916	1531 aa		33.55	■■■□□ 2.96
VEGFA-209	ENST00000425836	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.55	■■■□□ 2.96
VEGFA-209	ENST00000425836	ARHGEF25	Q86VW2	580 aa		33.55	■■■□□ 2.96
VEGFA-209	ENST00000425836	SLIT2	O94813	1529 aa		33.53	■■■□□ 2.96
VEGFA-209	ENST00000425836	ZBTB7C	A1YPR0	619 aa		33.52	■■■□□ 2.96
VEGFA-209	ENST00000425836	FBLN1	P23142	703 aa		33.52	■■■□□ 2.96
VEGFA-209	ENST00000425836	USP21	Q9UK80	565 aa		33.52	■■■□□ 2.96
VEGFA-209	ENST00000425836	NSD2	O96028	1365 aa		33.52	■■■□□ 2.96
VEGFA-209	ENST00000425836	ZNF772	Q68DY9	489 aa	Predicted RBP	33.51	■■■□□ 2.96
VEGFA-209	ENST00000425836	KIF20B	Q96Q89	1820 aa		33.5	■■■□□ 2.95
VEGFA-209	ENST00000425836	BTG4	Q9NY30	223 aa		33.5	■■■□□ 2.95
VEGFA-209	ENST00000425836	BCL9L	Q86UU0	1499 aa		33.5	■■■□□ 2.95
VEGFA-209	ENST00000425836	DDX10	Q13206	875 aa	Known RBP	33.49	■■■□□ 2.95
VEGFA-209	ENST00000425836	AATK	Q6ZMQ8	1374 aa		33.48	■■■□□ 2.95
VEGFA-209	ENST00000425836	UNC5CL	Q8IV45	518 aa		33.47	■■■□□ 2.95
VEGFA-209	ENST00000425836	COL14A1	Q05707	1796 aa	Known RBP	33.46	■■■□□ 2.95
VEGFA-209	ENST00000425836	POTEA	Q6S8J7	498 aa		33.44	■■■□□ 2.94
VEGFA-209	ENST00000425836	MORC1	Q86VD1	984 aa		33.44	■■■□□ 2.94
VEGFA-209	ENST00000425836	MAP3K19	Q56UN5	1328 aa		33.43	■■■□□ 2.94
VEGFA-209	ENST00000425836	CC2D1B	Q5T0F9	858 aa	Known RBP	33.43	■■■□□ 2.94
VEGFA-209	ENST00000425836	AXIN2	Q9Y2T1	843 aa		33.43	■■■□□ 2.94
VEGFA-209	ENST00000425836	NPC1L1	Q9UHC9	1359 aa		33.43	■■■□□ 2.94
VEGFA-209	ENST00000425836	RRS1	Q15050	365 aa	Known RBP	33.43	■■■□□ 2.94
VEGFA-209	ENST00000425836	QTRT2	Q9H974	415 aa	Known RBP	33.43	■■■□□ 2.94
VEGFA-209	ENST00000425836	CAMTA1	Q9Y6Y1	1673 aa		33.41	■■■□□ 2.94
VEGFA-209	ENST00000425836	TNNT2	P45379	298 aa	Predicted RBP	33.41	■■■□□ 2.94
VEGFA-209	ENST00000425836	PLCH1	Q4KWH8	1693 aa		33.4	■■■□□ 2.94
VEGFA-209	ENST00000425836	TRPC5	Q9UL62	973 aa	Predicted RBP	33.4	■■■□□ 2.94
VEGFA-209	ENST00000425836	LMO7	Q8WWI1	1683 aa		33.39	■■■□□ 2.94
VEGFA-209	ENST00000425836	CNGB1	Q14028	1251 aa	Predicted RBP	33.38	■■■□□ 2.93
VEGFA-209	ENST00000425836	STRN4	Q9NRL3	753 aa		33.38	■■■□□ 2.93

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