RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 PLEKHG3A1L390 1219 aa36.61■■■■□ 3.45
SMDT1-202ENST00000422252 FAM83GA6ND36 823 aa36.61■■■■□ 3.45
SMDT1-202ENST00000422252 GLI3P10071 1580 aa36.61■■■■□ 3.45
SMDT1-202ENST00000422252 ACEP12821 1306 aa36.6■■■■□ 3.45
SMDT1-202ENST00000422252 SRPK2P78362 688 aaKnown RBP36.6■■■■□ 3.45
SMDT1-202ENST00000422252 QRICH2Q9H0J4 1663 aa36.6■■■■□ 3.45
SMDT1-202ENST00000422252 VPS72Q15906 364 aa36.59■■■■□ 3.45
SMDT1-202ENST00000422252 NBPF8Q3BBV2 869 aa36.58■■■■□ 3.45
SMDT1-202ENST00000422252 ROCK2O75116 1388 aaKnown RBP36.57■■■■□ 3.45
SMDT1-202ENST00000422252 CABP2Q9NPB3 220 aa36.56■■■■□ 3.44
SMDT1-202ENST00000422252 CRYBG1Q9Y4K1 1723 aa36.56■■■■□ 3.44
SMDT1-202ENST00000422252 TRIM26Q12899 539 aaPredicted RBP36.54■■■■□ 3.44
SMDT1-202ENST00000422252 PPIP5K1Q6PFW1 1433 aa36.53■■■■□ 3.44
SMDT1-202ENST00000422252 COL14A1Q05707 1796 aaKnown RBP36.52■■■■□ 3.44
SMDT1-202ENST00000422252 BTG4Q9NY30 223 aa36.51■■■■□ 3.44
SMDT1-202ENST00000422252 CCDC9Q9Y3X0 531 aaKnown RBP36.51■■■■□ 3.44
SMDT1-202ENST00000422252 NRAPQ86VF7 1730 aa36.48■■■■□ 3.43
SMDT1-202ENST00000422252 NUTM2GQ5VZR2 741 aa36.47■■■■□ 3.43
SMDT1-202ENST00000422252 EVC2Q86UK5 1308 aa36.46■■■■□ 3.43
SMDT1-202ENST00000422252 PRDM11Q9NQV5 511 aa36.46■■■■□ 3.43
SMDT1-202ENST00000422252 SEPT12Q8IYM1 358 aa36.44■■■■□ 3.42
SMDT1-202ENST00000422252 PHRF1Q9P1Y6 1649 aaKnown RBP36.44■■■■□ 3.42
SMDT1-202ENST00000422252 ONECUT3O60422 494 aaPredicted RBP36.43■■■■□ 3.42
SMDT1-202ENST00000422252 ABTB2Q8N961 1025 aa36.43■■■■□ 3.42
SMDT1-202ENST00000422252 TONSLQ96HA7 1378 aa36.42■■■■□ 3.42
SMDT1-202ENST00000422252 CABP1Q9NZU7 370 aa36.42■■■■□ 3.42
SMDT1-202ENST00000422252 KIAA0232Q92628 1395 aa36.41■■■■□ 3.42
SMDT1-202ENST00000422252 BRD4O60885 1362 aaPredicted RBP36.4■■■■□ 3.42
SMDT1-202ENST00000422252 EP400Q96L91 3159 aa36.39■■■■□ 3.42
SMDT1-202ENST00000422252 BRWD3Q6RI45 1802 aa36.38■■■■□ 3.41
SMDT1-202ENST00000422252 CCDC125Q86Z20 511 aa36.37■■■■□ 3.41
SMDT1-202ENST00000422252 ZC3H6P61129 1189 aaKnown RBP36.36■■■■□ 3.41
SMDT1-202ENST00000422252 CHRNA2Q15822 529 aa36.35■■■■□ 3.41
SMDT1-202ENST00000422252 USP19O94966 1318 aa36.34■■■■□ 3.41
SMDT1-202ENST00000422252 USP6P35125 1406 aa36.34■■■■□ 3.41
SMDT1-202ENST00000422252 NLRP13Q86W25 1043 aa36.34■■■■□ 3.41
SMDT1-202ENST00000422252 CARD11Q9BXL7 1154 aa36.34■■■■□ 3.41
SMDT1-202ENST00000422252 NRKQ7Z2Y5 1582 aa36.33■■■■□ 3.41
SMDT1-202ENST00000422252 FAM98CQ17RN3 349 aaKnown RBP36.33■■■■□ 3.41
SMDT1-202ENST00000422252 SPATA31A5Q5VU36 1347 aa36.33■■■■□ 3.41
SMDT1-202ENST00000422252 SPATA31A7Q8IWB4 1347 aa36.33■■■■□ 3.41
SMDT1-202ENST00000422252 A0A0G2JS52 829 aa36.31■■■■□ 3.4
SMDT1-202ENST00000422252 MYT1Q01538 1121 aa36.31■■■■□ 3.4
SMDT1-202ENST00000422252 KRT27Q7Z3Y8 459 aa36.31■■■■□ 3.4
SMDT1-202ENST00000422252 SBNO2Q9Y2G9 1366 aa36.28■■■■□ 3.4
SMDT1-202ENST00000422252 CPDO75976 1380 aa36.27■■■■□ 3.4
SMDT1-202ENST00000422252 STRN4Q9NRL3 753 aa36.26■■■■□ 3.4
SMDT1-202ENST00000422252 BLMP54132 1417 aaPredicted RBP36.25■■■■□ 3.39
SMDT1-202ENST00000422252 SSH2Q76I76 1423 aa36.25■■■■□ 3.39
SMDT1-202ENST00000422252 GCP02774 474 aa36.25■■■■□ 3.39
SMDT1-202ENST00000422252 ZNF692Q9BU19 519 aaPredicted RBP36.24■■■■□ 3.39
SMDT1-202ENST00000422252 NLRP6P59044 892 aa36.23■■■■□ 3.39
SMDT1-202ENST00000422252 SPATA31A1Q5TZJ5 1347 aa36.23■■■■□ 3.39
SMDT1-202ENST00000422252 EVA1CP58658 441 aa36.2■■■■□ 3.39
SMDT1-202ENST00000422252 THSD7AQ9UPZ6 1657 aa36.19■■■■□ 3.38
SMDT1-202ENST00000422252 CAMTA1Q9Y6Y1 1673 aa36.19■■■■□ 3.38
SMDT1-202ENST00000422252 AKAP12Q02952 1782 aa36.18■■■■□ 3.38
SMDT1-202ENST00000422252 LMO7Q8WWI1 1683 aa36.18■■■■□ 3.38
SMDT1-202ENST00000422252 PIK3C2AO00443 1686 aa36.17■■■■□ 3.38
SMDT1-202ENST00000422252 TTC21BQ7Z4L5 1316 aa36.17■■■■□ 3.38
SMDT1-202ENST00000422252 SLIT3O75094 1523 aa36.17■■■■□ 3.38
SMDT1-202ENST00000422252 CPSF1Q10570 1443 aaKnown RBP36.17■■■■□ 3.38
SMDT1-202ENST00000422252 SF3B2Q13435 895 aaKnown RBP36.16■■■■□ 3.38
SMDT1-202ENST00000422252 TTC21AQ8NDW8 1320 aa36.12■■■■□ 3.37
SMDT1-202ENST00000422252 LARP1Q6PKG0 1096 aaKnown RBP36.12■■■■□ 3.37
SMDT1-202ENST00000422252 USP35Q9P2H5 1018 aa36.12■■■■□ 3.37
SMDT1-202ENST00000422252 KTN1Q86UP2 1357 aaKnown RBP36.12■■■■□ 3.37
SMDT1-202ENST00000422252 ZBTB7CA1YPR0 619 aa36.1■■■■□ 3.37
SMDT1-202ENST00000422252 ZRANB1Q9UGI0 708 aa36.09■■■■□ 3.37
SMDT1-202ENST00000422252 COL5A2P05997 1499 aaPredicted RBP36.08■■■■□ 3.37
SMDT1-202ENST00000422252 BARGINQ6ZT62 677 aa36.08■■■■□ 3.37
SMDT1-202ENST00000422252 DEFB132Q7Z7B7 95 aa36.08■■■■□ 3.37
SMDT1-202ENST00000422252 AATKQ6ZMQ8 1374 aa36.07■■■■□ 3.36
SMDT1-202ENST00000422252 FAM182BQ5T319 152 aa36.06■■■■□ 3.36
SMDT1-202ENST00000422252 TCP11L2Q8N4U5 519 aa36.05■■■■□ 3.36
SMDT1-202ENST00000422252 KCNH5Q8NCM2 988 aa36.05■■■■□ 3.36
SMDT1-202ENST00000422252 TMC1Q8TDI8 760 aa36.05■■■■□ 3.36
SMDT1-202ENST00000422252 MON2Q7Z3U7 1717 aa36.05■■■■□ 3.36
SMDT1-202ENST00000422252 PUS7Q96PZ0 661 aaKnown RBP36.03■■■■□ 3.36
SMDT1-202ENST00000422252 CD163L1Q9NR16 1453 aa36.03■■■■□ 3.36
SMDT1-202ENST00000422252 THRAP3Q9Y2W1 955 aaKnown RBP36.02■■■■□ 3.36
SMDT1-202ENST00000422252 ST20-MTHFSA0A0A6YYL1 179 aa36.01■■■■□ 3.36
SMDT1-202ENST00000422252 HDGFL2Q7Z4V5 671 aaPredicted RBP36■■■■□ 3.35
SMDT1-202ENST00000422252 TESK2Q96S53 571 aa36■■■■□ 3.35
SMDT1-202ENST00000422252 SLC12A5Q9H2X9 1139 aa36■■■■□ 3.35
SMDT1-202ENST00000422252 CRB1P82279 1406 aa36■■■■□ 3.35
SMDT1-202ENST00000422252 BAG6P46379 1132 aa35.99■■■■□ 3.35
SMDT1-202ENST00000422252 ARHGEF25Q86VW2 580 aa35.99■■■■□ 3.35
SMDT1-202ENST00000422252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.99■■■■□ 3.35
SMDT1-202ENST00000422252 COL18A1P39060 1754 aa35.98■■■■□ 3.35
SMDT1-202ENST00000422252 SOX12O15370 315 aa35.97■■■■□ 3.35
SMDT1-202ENST00000422252 SLC24A1O60721 1099 aa35.96■■■■□ 3.35
SMDT1-202ENST00000422252 RGPD1P0DJD0 1748 aa35.96■■■■□ 3.35
SMDT1-202ENST00000422252 USP31Q70CQ4 1352 aa35.95■■■■□ 3.35
SMDT1-202ENST00000422252 PDE3BQ13370 1112 aa35.95■■■■□ 3.35
SMDT1-202ENST00000422252 FAM196AQ6ZSG2 479 aa35.95■■■■□ 3.35
SMDT1-202ENST00000422252 TERF2IPQ9NYB0 399 aa35.95■■■■□ 3.35
SMDT1-202ENST00000422252 AXIN2Q9Y2T1 843 aa35.95■■■■□ 3.35
SMDT1-202ENST00000422252 NFAT5O94916 1531 aa35.94■■■■□ 3.34
SMDT1-202ENST00000422252 EDC4Q6P2E9 1401 aaKnown RBP35.92■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms