RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ATP10AO60312 1499 aa20.66■□□□□ 0.9
PKP4-204ENST00000421462 TMPOP42166 694 aaKnown RBP20.66■□□□□ 0.9
PKP4-204ENST00000421462 PKP1Q13835 747 aa20.66■□□□□ 0.9
PKP4-204ENST00000421462 SCAPERQ9BY12 1400 aa20.66■□□□□ 0.9
PKP4-204ENST00000421462 CEP152O94986 1710 aa20.66■□□□□ 0.9
PKP4-204ENST00000421462 DUOX2Q9NRD8 1548 aa20.65■□□□□ 0.9
PKP4-204ENST00000421462 APBB1O00213 710 aa20.65■□□□□ 0.9
PKP4-204ENST00000421462 RBM27Q9P2N5 1060 aaKnown RBP20.65■□□□□ 0.9
PKP4-204ENST00000421462 TPRNQ4KMQ1 711 aa20.65■□□□□ 0.9
PKP4-204ENST00000421462 MPNDQ8N594 471 aa20.65■□□□□ 0.9
PKP4-204ENST00000421462 CCDC27Q2M243 656 aa20.64■□□□□ 0.89
PKP4-204ENST00000421462 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
PKP4-204ENST00000421462 OFD1O75665 1012 aa20.63■□□□□ 0.89
PKP4-204ENST00000421462 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
PKP4-204ENST00000421462 TRAPPC8Q9Y2L5 1435 aa20.63■□□□□ 0.89
PKP4-204ENST00000421462 NCOA3Q9Y6Q9 1424 aa20.63■□□□□ 0.89
PKP4-204ENST00000421462 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.62■□□□□ 0.89
PKP4-204ENST00000421462 IPO8O15397 1037 aaKnown RBP20.62■□□□□ 0.89
PKP4-204ENST00000421462 PRPF40AO75400 957 aaKnown RBP20.62■□□□□ 0.89
PKP4-204ENST00000421462 RNF214Q8ND24 703 aa20.62■□□□□ 0.89
PKP4-204ENST00000421462 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
PKP4-204ENST00000421462 RBSNQ9H1K0 784 aa20.62■□□□□ 0.89
PKP4-204ENST00000421462 KLHL40Q2TBA0 621 aa20.61■□□□□ 0.89
PKP4-204ENST00000421462 PPP1R9BQ96SB3 815 aa20.61■□□□□ 0.89
PKP4-204ENST00000421462 THUMPD2Q9BTF0 503 aaKnown RBP20.61■□□□□ 0.89
PKP4-204ENST00000421462 PTPRTO14522 1441 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 SLC24A1O60721 1099 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 BMP2KLQ5H9B9 411 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 UQCRHLA0A096LP55 91 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 UQCRHP07919 91 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 PRIM1P49642 420 aaKnown RBP20.6■□□□□ 0.89
PKP4-204ENST00000421462 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 IQSEC2Q5JU85 1478 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
PKP4-204ENST00000421462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.898e-11■■■□□ 19.1
PKP4-204ENST00000421462 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
PKP4-204ENST00000421462 FOXD4L6Q3SYB3 417 aaPredicted RBP20.59■□□□□ 0.89
PKP4-204ENST00000421462 FOXD4L3Q6VB84 417 aaPredicted RBP20.59■□□□□ 0.89
PKP4-204ENST00000421462 SHPRHQ149N8 1683 aa20.58■□□□□ 0.89
PKP4-204ENST00000421462 PTMSP20962 102 aa20.58■□□□□ 0.88
PKP4-204ENST00000421462 FBLN1P23142 703 aa20.57■□□□□ 0.88
PKP4-204ENST00000421462 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
PKP4-204ENST00000421462 SPHKAPQ2M3C7 1700 aa20.57■□□□□ 0.88
PKP4-204ENST00000421462 STK26Q9P289 416 aa20.57■□□□□ 0.88
PKP4-204ENST00000421462 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
PKP4-204ENST00000421462 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
PKP4-204ENST00000421462 KANK1Q14678 1352 aa20.56■□□□□ 0.88
PKP4-204ENST00000421462 ZGPATQ8N5A5 531 aaKnown RBP20.56■□□□□ 0.88
PKP4-204ENST00000421462 SYCE3A1L190 88 aa20.55■□□□□ 0.88
PKP4-204ENST00000421462 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
PKP4-204ENST00000421462 ATAD2Q6PL18 1390 aa20.54■□□□□ 0.88
PKP4-204ENST00000421462 PTMAP06454 111 aaKnown RBP20.54■□□□□ 0.88
PKP4-204ENST00000421462 SRPK2P78362 688 aaKnown RBP20.54■□□□□ 0.88
PKP4-204ENST00000421462 NOL8Q76FK4 1167 aaKnown RBP20.54■□□□□ 0.88
PKP4-204ENST00000421462 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
PKP4-204ENST00000421462 DNTTIP2Q5QJE6 756 aaKnown RBP20.53■□□□□ 0.88
PKP4-204ENST00000421462 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
PKP4-204ENST00000421462 CDC45O75419 566 aa20.52■□□□□ 0.88
PKP4-204ENST00000421462 NOS1P29475 1434 aa20.52■□□□□ 0.88
PKP4-204ENST00000421462 TRPM2O94759 1503 aa20.52■□□□□ 0.88
PKP4-204ENST00000421462 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
PKP4-204ENST00000421462 CFAP65Q6ZU64 1925 aaKnown RBP20.52■□□□□ 0.88
PKP4-204ENST00000421462 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.87
PKP4-204ENST00000421462 TSPYL6Q8N831 410 aa20.51■□□□□ 0.87
PKP4-204ENST00000421462 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
PKP4-204ENST00000421462 HMOX1P09601 288 aa20.5■□□□□ 0.87
PKP4-204ENST00000421462 NSFL1CQ9UNZ2 370 aaKnown RBP20.5■□□□□ 0.87
PKP4-204ENST00000421462 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
PKP4-204ENST00000421462 ZBTB7BO15156 539 aaPredicted RBP20.5■□□□□ 0.87
PKP4-204ENST00000421462 SIRT2Q8IXJ6 389 aa20.5■□□□□ 0.87
PKP4-204ENST00000421462 GSPT1P15170 499 aaKnown RBP20.5■□□□□ 0.87
PKP4-204ENST00000421462 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.5■□□□□ 0.87
PKP4-204ENST00000421462 GPT2Q8TD30 523 aa20.49■□□□□ 0.87
PKP4-204ENST00000421462 NOL7Q9UMY1 257 aaKnown RBP20.49■□□□□ 0.87
PKP4-204ENST00000421462 TSC1Q92574 1164 aa20.49■□□□□ 0.87
PKP4-204ENST00000421462 GCC1Q96CN9 775 aa20.49■□□□□ 0.87
PKP4-204ENST00000421462 NUCB2P80303 420 aa20.48■□□□□ 0.87
PKP4-204ENST00000421462 OTUD7AQ8TE49 926 aaPredicted RBP20.48■□□□□ 0.87
PKP4-204ENST00000421462 ABCA6Q8N139 1617 aa20.48■□□□□ 0.87
PKP4-204ENST00000421462 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
PKP4-204ENST00000421462 ZNF445P59923 1031 aa20.47■□□□□ 0.87
PKP4-204ENST00000421462 SMARCA5O60264 1052 aaPredicted RBP20.46■□□□□ 0.87
PKP4-204ENST00000421462 TMEM63CQ9P1W3 806 aa20.46■□□□□ 0.87
PKP4-204ENST00000421462 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
PKP4-204ENST00000421462 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
PKP4-204ENST00000421462 RABEP1Q15276 862 aa20.46■□□□□ 0.87
PKP4-204ENST00000421462 GGT6Q6P531 493 aa20.46■□□□□ 0.87
PKP4-204ENST00000421462 EVC2Q86UK5 1308 aa20.45■□□□□ 0.86
PKP4-204ENST00000421462 FAM177BA6PVY3 158 aa20.45■□□□□ 0.86
PKP4-204ENST00000421462 ZKSCAN5Q9Y2L8 839 aa20.45■□□□□ 0.86
PKP4-204ENST00000421462 ABCC11Q96J66 1382 aa20.45■□□□□ 0.86
PKP4-204ENST00000421462 ZNF830Q96NB3 372 aaPredicted RBP20.45■□□□□ 0.86
PKP4-204ENST00000421462 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
PKP4-204ENST00000421462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.868e-7■■■□□ 15.7
PKP4-204ENST00000421462 PLEKHM2Q8IWE5 1019 aa20.42■□□□□ 0.86
PKP4-204ENST00000421462 MAP3K4Q9Y6R4 1608 aa20.42■□□□□ 0.86
PKP4-204ENST00000421462 PLCH2O75038 1416 aa20.42■□□□□ 0.86
PKP4-204ENST00000421462 GDPD2Q9HCC8 539 aa20.42■□□□□ 0.86
PKP4-204ENST00000421462 MINK1Q8N4C8 1332 aaPredicted RBP20.42■□□□□ 0.86
PKP4-204ENST00000421462 PRDM4Q9UKN5 801 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms